Protein–RNA interactions for Protein: Q9UMD9

COL17A1, Collagen alpha-1(XVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,497 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1Q9UMD9 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
COL17A1Q9UMD9 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
COL17A1Q9UMD9 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC5.14□□□□□ -1.59
COL17A1Q9UMD9 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
COL17A1Q9UMD9 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC5.13□□□□□ -1.59
COL17A1Q9UMD9 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
COL17A1Q9UMD9 Y_RNA.22-201ENST00000362492 102 ntBASIC5.13□□□□□ -1.59
COL17A1Q9UMD9 RNU6-682P-201ENST00000363843 106 ntBASIC5.13□□□□□ -1.59
COL17A1Q9UMD9 RNU6-1078P-201ENST00000364522 103 ntBASIC5.13□□□□□ -1.59
COL17A1Q9UMD9 RNU6-215P-201ENST00000365169 102 ntBASIC5.13□□□□□ -1.59
COL17A1Q9UMD9 AL360182.1-201ENST00000397433 468 ntBASIC5.13□□□□□ -1.59
COL17A1Q9UMD9 COX6CP10-201ENST00000416832 224 ntBASIC5.13□□□□□ -1.59
COL17A1Q9UMD9 AL031659.1-201ENST00000447075 539 ntBASIC5.13□□□□□ -1.59
COL17A1Q9UMD9 RN7SL863P-201ENST00000462370 296 ntBASIC5.13□□□□□ -1.59
COL17A1Q9UMD9 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC5.13□□□□□ -1.59
COL17A1Q9UMD9 RNU4-71P-201ENST00000516258 113 ntBASIC5.13□□□□□ -1.59
COL17A1Q9UMD9 AP002392.1-201ENST00000537692 208 ntBASIC5.13□□□□□ -1.59
COL17A1Q9UMD9 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC5.13□□□□□ -1.59
COL17A1Q9UMD9 RAC1P9-201ENST00000604990 392 ntBASIC5.13□□□□□ -1.59
COL17A1Q9UMD9 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC5.13□□□□□ -1.59
COL17A1Q9UMD9 AC103710.2-201ENST00000609912 942 ntBASIC5.13□□□□□ -1.59
COL17A1Q9UMD9 OTUD4P1-201ENST00000237841 3067 ntBASIC5.13□□□□□ -1.59
COL17A1Q9UMD9 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC5.13□□□□□ -1.59
COL17A1Q9UMD9 MFSD8-233ENST00000641482 4860 ntBASIC5.13□□□□□ -1.59
COL17A1Q9UMD9 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC5.13□□□□□ -1.59
COL17A1Q9UMD9 ZNF72P-201ENST00000425869 1908 ntBASIC5.13□□□□□ -1.59
COL17A1Q9UMD9 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
COL17A1Q9UMD9 Y_RNA.269-201ENST00000364685 89 ntBASIC5.13□□□□□ -1.59
COL17A1Q9UMD9 RNU6-1029P-201ENST00000384109 107 ntBASIC5.13□□□□□ -1.59
COL17A1Q9UMD9 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
COL17A1Q9UMD9 MIR1298-201ENST00000408783 112 ntBASIC5.13□□□□□ -1.59
COL17A1Q9UMD9 Y_RNA.594-201ENST00000410373 140 ntBASIC5.13□□□□□ -1.59
COL17A1Q9UMD9 TRAPPC2P10-201ENST00000415662 323 ntBASIC5.13□□□□□ -1.59
COL17A1Q9UMD9 AL035461.1-201ENST00000421490 332 ntBASIC5.13□□□□□ -1.59
COL17A1Q9UMD9 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC5.13□□□□□ -1.59
COL17A1Q9UMD9 RPL35AP22-201ENST00000436855 335 ntBASIC5.13□□□□□ -1.59
COL17A1Q9UMD9 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
COL17A1Q9UMD9 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC5.13□□□□□ -1.59
COL17A1Q9UMD9 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC5.13□□□□□ -1.59
COL17A1Q9UMD9 AL049830.2-201ENST00000480072 201 ntBASIC5.13□□□□□ -1.59
COL17A1Q9UMD9 RN7SKP209-201ENST00000516888 304 ntBASIC5.13□□□□□ -1.59
COL17A1Q9UMD9 SNORA31.18-201ENST00000517043 134 ntBASIC5.13□□□□□ -1.59
COL17A1Q9UMD9 MTND5P41-201ENST00000517498 206 ntBASIC5.13□□□□□ -1.59
COL17A1Q9UMD9 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC5.13□□□□□ -1.59
COL17A1Q9UMD9 AC040926.1-201ENST00000530195 238 ntBASIC5.13□□□□□ -1.59
COL17A1Q9UMD9 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC5.13□□□□□ -1.59
COL17A1Q9UMD9 CBX3P4-201ENST00000538909 354 ntBASIC5.13□□□□□ -1.59
COL17A1Q9UMD9 MDM2-233ENST00000545204 398 ntTSL 5 BASIC5.13□□□□□ -1.59
COL17A1Q9UMD9 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC5.13□□□□□ -1.59
COL17A1Q9UMD9 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC5.13□□□□□ -1.59
COL17A1Q9UMD9 AC007566.2-201ENST00000603642 413 ntBASIC5.13□□□□□ -1.59
COL17A1Q9UMD9 uc_338.34-201ENST00000617467 174 ntBASIC5.13□□□□□ -1.59
COL17A1Q9UMD9 AC018692.3-201ENST00000623929 123 ntBASIC5.13□□□□□ -1.59
COL17A1Q9UMD9 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
COL17A1Q9UMD9 AC244517.1-201ENST00000606030 2086 ntBASIC5.13□□□□□ -1.59
COL17A1Q9UMD9 AL356489.2-201ENST00000566968 3528 ntBASIC5.12□□□□□ -1.59
COL17A1Q9UMD9 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC5.12□□□□□ -1.59
COL17A1Q9UMD9 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
COL17A1Q9UMD9 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC5.12□□□□□ -1.59
COL17A1Q9UMD9 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
COL17A1Q9UMD9 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
COL17A1Q9UMD9 AL139276.1-201ENST00000311910 1001 ntBASIC5.12□□□□□ -1.59
COL17A1Q9UMD9 AC062016.1-201ENST00000355719 319 ntBASIC5.12□□□□□ -1.59
COL17A1Q9UMD9 Y_RNA.54-201ENST00000362766 105 ntBASIC5.12□□□□□ -1.59
COL17A1Q9UMD9 Y_RNA.83-201ENST00000363005 113 ntBASIC5.12□□□□□ -1.59
COL17A1Q9UMD9 RNU6-959P-201ENST00000384671 107 ntBASIC5.12□□□□□ -1.59
COL17A1Q9UMD9 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC5.12□□□□□ -1.59
COL17A1Q9UMD9 RPL29P29-201ENST00000448725 423 ntBASIC5.12□□□□□ -1.59
COL17A1Q9UMD9 AC092436.1-201ENST00000506450 503 ntBASIC5.12□□□□□ -1.59
COL17A1Q9UMD9 HIGD1AP13-201ENST00000509878 289 ntBASIC5.12□□□□□ -1.59
COL17A1Q9UMD9 RNU6-861P-201ENST00000516745 106 ntBASIC5.12□□□□□ -1.59
COL17A1Q9UMD9 SNORA40.15-201ENST00000516884 107 ntBASIC5.12□□□□□ -1.59
COL17A1Q9UMD9 AC008489.1-201ENST00000524271 483 ntBASIC5.12□□□□□ -1.59
COL17A1Q9UMD9 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC5.12□□□□□ -1.59
COL17A1Q9UMD9 MIR4703-201ENST00000577728 79 ntBASIC5.12□□□□□ -1.59
COL17A1Q9UMD9 IGHVIII-44-202ENST00000636235 289 ntBASIC5.12□□□□□ -1.59
COL17A1Q9UMD9 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
COL17A1Q9UMD9 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
COL17A1Q9UMD9 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC5.11□□□□□ -1.59
COL17A1Q9UMD9 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC5.11□□□□□ -1.59
COL17A1Q9UMD9 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC5.11□□□□□ -1.59
COL17A1Q9UMD9 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC5.11□□□□□ -1.59
COL17A1Q9UMD9 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC5.11□□□□□ -1.59
COL17A1Q9UMD9 CPD-202ENST00000543464 4007 ntTSL 2 BASIC5.11□□□□□ -1.59
COL17A1Q9UMD9 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
COL17A1Q9UMD9 RFX3-203ENST00000381984 364 ntTSL 3 BASIC5.11□□□□□ -1.59
COL17A1Q9UMD9 RNU6-417P-201ENST00000384712 107 ntBASIC5.11□□□□□ -1.59
COL17A1Q9UMD9 RNU6-1168P-201ENST00000390831 104 ntBASIC5.11□□□□□ -1.59
COL17A1Q9UMD9 SNORD58.1-201ENST00000391313 66 ntBASIC5.11□□□□□ -1.59
COL17A1Q9UMD9 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC5.11□□□□□ -1.59
COL17A1Q9UMD9 AC010095.1-201ENST00000443543 144 ntBASIC5.11□□□□□ -1.59
COL17A1Q9UMD9 MTCO3P8-201ENST00000453691 755 ntBASIC5.11□□□□□ -1.59
COL17A1Q9UMD9 RNU7-180P-201ENST00000459240 63 ntBASIC5.11□□□□□ -1.59
COL17A1Q9UMD9 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC5.11□□□□□ -1.59
COL17A1Q9UMD9 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC5.11□□□□□ -1.59
COL17A1Q9UMD9 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC5.11□□□□□ -1.59
COL17A1Q9UMD9 RNU6-397P-201ENST00000516226 104 ntBASIC5.11□□□□□ -1.59
COL17A1Q9UMD9 SCARNA16.2-201ENST00000516520 172 ntBASIC5.11□□□□□ -1.59
COL17A1Q9UMD9 AP003733.2-201ENST00000529409 171 ntBASIC5.11□□□□□ -1.59
COL17A1Q9UMD9 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC5.11□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms