Protein–RNA interactions for Protein: Q9UJV9

DDX41, Probable ATP-dependent RNA helicase DDX41, humanhuman

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41Q9UJV9 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
DDX41Q9UJV9 CRP-203ENST00000368111 512 ntTSL 3 BASIC4.43□□□□□ -1.7
DDX41Q9UJV9 Y_RNA.428-201ENST00000384078 102 ntBASIC4.43□□□□□ -1.7
DDX41Q9UJV9 Y_RNA.463-201ENST00000384271 102 ntBASIC4.43□□□□□ -1.7
DDX41Q9UJV9 SNORA57.3-201ENST00000411095 141 ntBASIC4.43□□□□□ -1.7
DDX41Q9UJV9 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC4.43□□□□□ -1.7
DDX41Q9UJV9 AC006445.2-201ENST00000510061 472 ntBASIC4.43□□□□□ -1.7
DDX41Q9UJV9 SCARNA14-201ENST00000516903 136 ntBASIC4.43□□□□□ -1.7
DDX41Q9UJV9 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC4.43□□□□□ -1.7
DDX41Q9UJV9 AC103996.1-201ENST00000555468 102 ntBASIC4.43□□□□□ -1.7
DDX41Q9UJV9 H3F3AP1-201ENST00000559984 334 ntBASIC4.43□□□□□ -1.7
DDX41Q9UJV9 CYCSP39-201ENST00000565821 309 ntBASIC4.43□□□□□ -1.7
DDX41Q9UJV9 AMZ2P1-203ENST00000565833 850 ntBASIC4.43□□□□□ -1.7
DDX41Q9UJV9 BNIP3P16-201ENST00000589779 534 ntBASIC4.43□□□□□ -1.7
DDX41Q9UJV9 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC4.43□□□□□ -1.7
DDX41Q9UJV9 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC4.43□□□□□ -1.7
DDX41Q9UJV9 AC002076.2-201ENST00000617362 122 ntBASIC4.43□□□□□ -1.7
DDX41Q9UJV9 AC073308.1-201ENST00000623696 305 ntBASIC4.43□□□□□ -1.7
DDX41Q9UJV9 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
DDX41Q9UJV9 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC4.43□□□□□ -1.7
DDX41Q9UJV9 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC4.43□□□□□ -1.7
DDX41Q9UJV9 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
DDX41Q9UJV9 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
DDX41Q9UJV9 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
DDX41Q9UJV9 MTND5P7-201ENST00000413558 1798 ntBASIC4.42□□□□□ -1.7
DDX41Q9UJV9 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC4.42□□□□□ -1.7
DDX41Q9UJV9 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC4.42□□□□□ -1.7
DDX41Q9UJV9 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC4.42□□□□□ -1.7
DDX41Q9UJV9 Y_RNA.5-201ENST00000362334 102 ntBASIC4.42□□□□□ -1.7
DDX41Q9UJV9 Y_RNA.145-201ENST00000363527 102 ntBASIC4.42□□□□□ -1.7
DDX41Q9UJV9 RNA5SP97-201ENST00000365006 84 ntBASIC4.42□□□□□ -1.7
DDX41Q9UJV9 U1.1-201ENST00000384101 164 ntBASIC4.42□□□□□ -1.7
DDX41Q9UJV9 MIR521-1-201ENST00000384902 87 ntBASIC4.42□□□□□ -1.7
DDX41Q9UJV9 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
DDX41Q9UJV9 RNU6-55P-201ENST00000411092 107 ntBASIC4.42□□□□□ -1.7
DDX41Q9UJV9 RNA5SP31-201ENST00000411144 127 ntBASIC4.42□□□□□ -1.7
DDX41Q9UJV9 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC4.42□□□□□ -1.7
DDX41Q9UJV9 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC4.42□□□□□ -1.7
DDX41Q9UJV9 AC011816.1-201ENST00000441346 546 ntBASIC4.42□□□□□ -1.7
DDX41Q9UJV9 MTND5P30-201ENST00000452896 1731 ntBASIC4.42□□□□□ -1.7
DDX41Q9UJV9 HMGN1P10-201ENST00000474557 553 ntBASIC4.42□□□□□ -1.7
DDX41Q9UJV9 UBE2CP3-201ENST00000502715 450 ntBASIC4.42□□□□□ -1.7
DDX41Q9UJV9 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC4.42□□□□□ -1.7
DDX41Q9UJV9 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC4.42□□□□□ -1.7
DDX41Q9UJV9 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC4.42□□□□□ -1.7
DDX41Q9UJV9 AC007991.1-201ENST00000522680 631 ntBASIC4.42□□□□□ -1.7
DDX41Q9UJV9 AP004607.1-201ENST00000524456 203 ntBASIC4.42□□□□□ -1.7
DDX41Q9UJV9 HIGD1AP1-201ENST00000550979 275 ntBASIC4.42□□□□□ -1.7
DDX41Q9UJV9 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC4.42□□□□□ -1.7
DDX41Q9UJV9 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC4.42□□□□□ -1.7
DDX41Q9UJV9 AC012468.1-201ENST00000604888 430 ntBASIC4.42□□□□□ -1.7
DDX41Q9UJV9 MIR3976-201ENST00000606807 139 ntBASIC4.42□□□□□ -1.7
DDX41Q9UJV9 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC4.42□□□□□ -1.7
DDX41Q9UJV9 AF127577.6-201ENST00000623352 2191 ntBASIC4.42□□□□□ -1.7
DDX41Q9UJV9 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC4.42□□□□□ -1.7
DDX41Q9UJV9 AC002546.1-201ENST00000588041 2504 ntBASIC4.42□□□□□ -1.7
DDX41Q9UJV9 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
DDX41Q9UJV9 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC4.41□□□□□ -1.7
DDX41Q9UJV9 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC4.41□□□□□ -1.7
DDX41Q9UJV9 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
DDX41Q9UJV9 MIR208A-201ENST00000362287 71 ntBASIC4.41□□□□□ -1.7
DDX41Q9UJV9 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
DDX41Q9UJV9 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC4.41□□□□□ -1.7
DDX41Q9UJV9 RNU6-174P-201ENST00000410406 106 ntBASIC4.41□□□□□ -1.7
DDX41Q9UJV9 AC018865.2-201ENST00000423631 129 ntBASIC4.41□□□□□ -1.7
DDX41Q9UJV9 AC083863.1-201ENST00000438811 231 ntBASIC4.41□□□□□ -1.7
DDX41Q9UJV9 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
DDX41Q9UJV9 RPL26P9-201ENST00000457466 433 ntBASIC4.41□□□□□ -1.7
DDX41Q9UJV9 PTP4A1P4-201ENST00000512479 322 ntBASIC4.41□□□□□ -1.7
DDX41Q9UJV9 SNORA25.10-201ENST00000515926 124 ntBASIC4.41□□□□□ -1.7
DDX41Q9UJV9 RNU6-928P-201ENST00000516876 104 ntBASIC4.41□□□□□ -1.7
DDX41Q9UJV9 SNORD116.3-201ENST00000517176 78 ntBASIC4.41□□□□□ -1.7
DDX41Q9UJV9 AC087499.8-201ENST00000578406 226 ntBASIC4.41□□□□□ -1.7
DDX41Q9UJV9 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
DDX41Q9UJV9 TEX41-300ENST00000631048 69 ntTSL 5 BASIC4.41□□□□□ -1.7
DDX41Q9UJV9 U4.7-201ENST00000638126 106 ntBASIC4.41□□□□□ -1.7
DDX41Q9UJV9 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
DDX41Q9UJV9 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
DDX41Q9UJV9 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC4.41□□□□□ -1.7
DDX41Q9UJV9 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC4.41□□□□□ -1.7
DDX41Q9UJV9 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
DDX41Q9UJV9 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC4.41□□□□□ -1.7
DDX41Q9UJV9 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
DDX41Q9UJV9 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
DDX41Q9UJV9 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
DDX41Q9UJV9 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
DDX41Q9UJV9 AC007656.2-201ENST00000624902 4547 ntBASIC4.4□□□□□ -1.7
DDX41Q9UJV9 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
DDX41Q9UJV9 SNORA63C-201ENST00000364578 129 ntBASIC4.4□□□□□ -1.71
DDX41Q9UJV9 MIR449B-201ENST00000384995 97 ntBASIC4.4□□□□□ -1.71
DDX41Q9UJV9 AL591034.2-201ENST00000402839 359 ntBASIC4.4□□□□□ -1.71
DDX41Q9UJV9 MIR1251-201ENST00000408552 70 ntBASIC4.4□□□□□ -1.71
DDX41Q9UJV9 AC096664.2-201ENST00000411843 406 ntBASIC4.4□□□□□ -1.71
DDX41Q9UJV9 AL159169.1-201ENST00000421119 127 ntBASIC4.4□□□□□ -1.71
DDX41Q9UJV9 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC4.4□□□□□ -1.71
DDX41Q9UJV9 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC4.4□□□□□ -1.71
DDX41Q9UJV9 AC099799.1-201ENST00000439809 192 ntBASIC4.4□□□□□ -1.71
DDX41Q9UJV9 AL590664.1-201ENST00000448065 339 ntBASIC4.4□□□□□ -1.71
DDX41Q9UJV9 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC4.4□□□□□ -1.71
DDX41Q9UJV9 AC013470.1-201ENST00000453438 462 ntBASIC4.4□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 159.4 ms