Protein–RNA interactions for Protein: Q9UGP4

LIMD1, LIM domain-containing protein 1, humanhuman

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1Q9UGP4 RAB28P5-201ENST00000427490 651 ntBASIC5.09□□□□□ -1.59
LIMD1Q9UGP4 AC016831.4-201ENST00000438302 307 ntBASIC5.09□□□□□ -1.59
LIMD1Q9UGP4 AC009237.7-201ENST00000447357 229 ntBASIC5.09□□□□□ -1.59
LIMD1Q9UGP4 HMGN2P10-201ENST00000448085 265 ntBASIC5.09□□□□□ -1.59
LIMD1Q9UGP4 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC5.09□□□□□ -1.59
LIMD1Q9UGP4 AC010618.1-201ENST00000469924 477 ntBASIC5.09□□□□□ -1.59
LIMD1Q9UGP4 AL121594.1-201ENST00000475906 575 ntBASIC5.09□□□□□ -1.59
LIMD1Q9UGP4 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC5.09□□□□□ -1.59
LIMD1Q9UGP4 AC005840.1-201ENST00000498412 377 ntBASIC5.09□□□□□ -1.59
LIMD1Q9UGP4 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC5.09□□□□□ -1.59
LIMD1Q9UGP4 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC5.09□□□□□ -1.59
LIMD1Q9UGP4 AC040958.1-201ENST00000561102 201 ntBASIC5.09□□□□□ -1.59
LIMD1Q9UGP4 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC5.09□□□□□ -1.59
LIMD1Q9UGP4 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC5.09□□□□□ -1.59
LIMD1Q9UGP4 FAM27B-201ENST00000610601 213 ntBASIC5.09□□□□□ -1.59
LIMD1Q9UGP4 snoU18.1-201ENST00000629629 71 ntBASIC5.09□□□□□ -1.59
LIMD1Q9UGP4 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.59
LIMD1Q9UGP4 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
LIMD1Q9UGP4 CROT-204ENST00000442291 1993 ntTSL 5 BASIC5.09□□□□□ -1.6
LIMD1Q9UGP4 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC5.09□□□□□ -1.6
LIMD1Q9UGP4 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.09□□□□□ -1.6
LIMD1Q9UGP4 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC5.09□□□□□ -1.6
LIMD1Q9UGP4 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
LIMD1Q9UGP4 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
LIMD1Q9UGP4 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC5.08□□□□□ -1.6
LIMD1Q9UGP4 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC5.08□□□□□ -1.6
LIMD1Q9UGP4 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
LIMD1Q9UGP4 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
LIMD1Q9UGP4 Y_RNA.7-201ENST00000362352 102 ntBASIC5.08□□□□□ -1.6
LIMD1Q9UGP4 RNU6-1285P-201ENST00000363480 105 ntBASIC5.08□□□□□ -1.6
LIMD1Q9UGP4 RNU6-1279P-201ENST00000383917 103 ntBASIC5.08□□□□□ -1.6
LIMD1Q9UGP4 SNORD116-18-201ENST00000383961 92 ntBASIC5.08□□□□□ -1.6
LIMD1Q9UGP4 AL512633.1-201ENST00000399931 655 ntBASIC5.08□□□□□ -1.6
LIMD1Q9UGP4 HSPE1P12-201ENST00000412576 301 ntBASIC5.08□□□□□ -1.6
LIMD1Q9UGP4 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC5.08□□□□□ -1.6
LIMD1Q9UGP4 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC5.08□□□□□ -1.6
LIMD1Q9UGP4 AP000705.1-201ENST00000454567 350 ntBASIC5.08□□□□□ -1.6
LIMD1Q9UGP4 RN7SL814P-201ENST00000487715 300 ntBASIC5.08□□□□□ -1.6
LIMD1Q9UGP4 AC011602.1-201ENST00000546484 331 ntBASIC5.08□□□□□ -1.6
LIMD1Q9UGP4 IGKV2OR2-8-201ENST00000558710 300 ntBASIC5.08□□□□□ -1.6
LIMD1Q9UGP4 AC090897.2-201ENST00000581715 130 ntBASIC5.08□□□□□ -1.6
LIMD1Q9UGP4 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC5.08□□□□□ -1.6
LIMD1Q9UGP4 IGKV2OR2-2-201ENST00000605025 300 ntBASIC5.08□□□□□ -1.6
LIMD1Q9UGP4 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC5.08□□□□□ -1.6
LIMD1Q9UGP4 AC019206.1-201ENST00000621938 425 ntBASIC5.08□□□□□ -1.6
LIMD1Q9UGP4 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC5.08□□□□□ -1.6
LIMD1Q9UGP4 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
LIMD1Q9UGP4 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
LIMD1Q9UGP4 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
LIMD1Q9UGP4 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC5.08□□□□□ -1.6
LIMD1Q9UGP4 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
LIMD1Q9UGP4 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC5.07□□□□□ -1.6
LIMD1Q9UGP4 ARHGAP42P3-201ENST00000443989 2508 ntBASIC5.07□□□□□ -1.6
LIMD1Q9UGP4 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC5.07□□□□□ -1.6
LIMD1Q9UGP4 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC5.07□□□□□ -1.6
LIMD1Q9UGP4 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
LIMD1Q9UGP4 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC5.07□□□□□ -1.6
LIMD1Q9UGP4 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC5.07□□□□□ -1.6
LIMD1Q9UGP4 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC5.07□□□□□ -1.6
LIMD1Q9UGP4 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
LIMD1Q9UGP4 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
LIMD1Q9UGP4 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
LIMD1Q9UGP4 Y_RNA.121-201ENST00000363309 113 ntBASIC5.07□□□□□ -1.6
LIMD1Q9UGP4 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
LIMD1Q9UGP4 RNU6-449P-201ENST00000383914 107 ntBASIC5.07□□□□□ -1.6
LIMD1Q9UGP4 MIR195-201ENST00000385194 87 ntBASIC5.07□□□□□ -1.6
LIMD1Q9UGP4 SNORA48.7-201ENST00000391302 135 ntBASIC5.07□□□□□ -1.6
LIMD1Q9UGP4 RPL21P17-201ENST00000397467 475 ntBASIC5.07□□□□□ -1.6
LIMD1Q9UGP4 RNU6ATAC34P-201ENST00000408879 121 ntBASIC5.07□□□□□ -1.6
LIMD1Q9UGP4 RNA5SP129-201ENST00000410276 118 ntBASIC5.07□□□□□ -1.6
LIMD1Q9UGP4 AC114755.2-201ENST00000413520 361 ntBASIC5.07□□□□□ -1.6
LIMD1Q9UGP4 RPEP3-201ENST00000425462 676 ntBASIC5.07□□□□□ -1.6
LIMD1Q9UGP4 RPS29P9-201ENST00000440360 171 ntBASIC5.07□□□□□ -1.6
LIMD1Q9UGP4 RNA5SP392-201ENST00000516905 112 ntBASIC5.07□□□□□ -1.6
LIMD1Q9UGP4 IGHVIII-2-1-201ENST00000518843 291 ntBASIC5.07□□□□□ -1.6
LIMD1Q9UGP4 AC006349.1-201ENST00000555526 235 ntBASIC5.07□□□□□ -1.6
LIMD1Q9UGP4 AC055872.1-201ENST00000570978 278 ntBASIC5.07□□□□□ -1.6
LIMD1Q9UGP4 MIR3160-1-201ENST00000577972 85 ntBASIC5.07□□□□□ -1.6
LIMD1Q9UGP4 MIR3136-201ENST00000583498 78 ntBASIC5.07□□□□□ -1.6
LIMD1Q9UGP4 AC004467.1-201ENST00000615678 330 ntBASIC5.07□□□□□ -1.6
LIMD1Q9UGP4 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
LIMD1Q9UGP4 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
LIMD1Q9UGP4 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC5.07□□□□□ -1.6
LIMD1Q9UGP4 AC002543.1-201ENST00000299783 1954 ntBASIC5.07□□□□□ -1.6
LIMD1Q9UGP4 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
LIMD1Q9UGP4 AC007656.2-201ENST00000624902 4547 ntBASIC5.06□□□□□ -1.6
LIMD1Q9UGP4 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC5.06□□□□□ -1.6
LIMD1Q9UGP4 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC5.06□□□□□ -1.6
LIMD1Q9UGP4 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.6
LIMD1Q9UGP4 SNORA31-201ENST00000362607 130 ntBASIC5.06□□□□□ -1.6
LIMD1Q9UGP4 RNU6-1272P-201ENST00000362776 107 ntBASIC5.06□□□□□ -1.6
LIMD1Q9UGP4 RNU6-417P-201ENST00000384712 107 ntBASIC5.06□□□□□ -1.6
LIMD1Q9UGP4 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC5.06□□□□□ -1.6
LIMD1Q9UGP4 AC019205.3-201ENST00000424573 156 ntBASIC5.06□□□□□ -1.6
LIMD1Q9UGP4 AC009238.2-201ENST00000431026 355 ntBASIC5.06□□□□□ -1.6
LIMD1Q9UGP4 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC5.06□□□□□ -1.6
LIMD1Q9UGP4 RNU6-155P-201ENST00000516347 100 ntBASIC5.06□□□□□ -1.6
LIMD1Q9UGP4 RNU6-479P-201ENST00000516348 105 ntBASIC5.06□□□□□ -1.6
LIMD1Q9UGP4 RNU4ATAC15P-201ENST00000516415 126 ntBASIC5.06□□□□□ -1.6
LIMD1Q9UGP4 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC5.06□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 124.3 ms