Protein–RNA interactions for Protein: Q9P219

CCDC88C, Protein Daple, humanhuman

Predictions only

Length 2,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88CQ9P219 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC1.2□□□□□ -2.22
CCDC88CQ9P219 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.2□□□□□ -2.22
CCDC88CQ9P219 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC1.2□□□□□ -2.22
CCDC88CQ9P219 RNU1-148P-201ENST00000384472 162 ntBASIC1.2□□□□□ -2.22
CCDC88CQ9P219 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC1.2□□□□□ -2.22
CCDC88CQ9P219 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC1.2□□□□□ -2.22
CCDC88CQ9P219 AL365400.1-201ENST00000431854 640 ntBASIC1.2□□□□□ -2.22
CCDC88CQ9P219 EEF1A1P39-201ENST00000440791 250 ntBASIC1.2□□□□□ -2.22
CCDC88CQ9P219 MTCO1P27-201ENST00000448269 226 ntBASIC1.2□□□□□ -2.22
CCDC88CQ9P219 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC1.2□□□□□ -2.22
CCDC88CQ9P219 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC1.2□□□□□ -2.22
CCDC88CQ9P219 AC013267.1-201ENST00000458227 267 ntBASIC1.2□□□□□ -2.22
CCDC88CQ9P219 AC006512.1-201ENST00000468816 291 ntBASIC1.2□□□□□ -2.22
CCDC88CQ9P219 AC134050.1-201ENST00000495088 933 ntBASIC1.2□□□□□ -2.22
CCDC88CQ9P219 MTCYBP35-201ENST00000503630 1137 ntBASIC1.2□□□□□ -2.22
CCDC88CQ9P219 HMGB1P28-201ENST00000507778 552 ntBASIC1.2□□□□□ -2.22
CCDC88CQ9P219 AC098591.2-201ENST00000510152 315 ntBASIC1.2□□□□□ -2.22
CCDC88CQ9P219 AC091965.2-201ENST00000512324 613 ntBASIC1.2□□□□□ -2.22
CCDC88CQ9P219 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC1.2□□□□□ -2.22
CCDC88CQ9P219 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC1.2□□□□□ -2.22
CCDC88CQ9P219 AC068338.1-201ENST00000565567 176 ntBASIC1.2□□□□□ -2.22
CCDC88CQ9P219 MIR3167-201ENST00000579623 85 ntBASIC1.2□□□□□ -2.22
CCDC88CQ9P219 AC060771.1-201ENST00000582031 164 ntBASIC1.2□□□□□ -2.22
CCDC88CQ9P219 DUSP12P1-201ENST00000612874 516 ntBASIC1.2□□□□□ -2.22
CCDC88CQ9P219 AC107075.1-201ENST00000613695 314 ntBASIC1.2□□□□□ -2.22
CCDC88CQ9P219 AC023158.2-201ENST00000614876 543 ntBASIC1.2□□□□□ -2.22
CCDC88CQ9P219 AC027514.1-201ENST00000588561 1603 ntBASIC1.2□□□□□ -2.22
CCDC88CQ9P219 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
CCDC88CQ9P219 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.19□□□□□ -2.22
CCDC88CQ9P219 RNU6-778P-201ENST00000363269 103 ntBASIC1.19□□□□□ -2.22
CCDC88CQ9P219 RNU6-1284P-201ENST00000363701 100 ntBASIC1.19□□□□□ -2.22
CCDC88CQ9P219 RNU6-744P-201ENST00000365557 107 ntBASIC1.19□□□□□ -2.22
CCDC88CQ9P219 RNU6-1316P-201ENST00000384242 108 ntBASIC1.19□□□□□ -2.22
CCDC88CQ9P219 MIR7-2-201ENST00000384970 110 ntBASIC1.19□□□□□ -2.22
CCDC88CQ9P219 U8.14-201ENST00000390843 143 ntBASIC1.19□□□□□ -2.22
CCDC88CQ9P219 SNORA40.2-201ENST00000390847 128 ntBASIC1.19□□□□□ -2.22
CCDC88CQ9P219 RPS12P24-201ENST00000412619 387 ntBASIC1.19□□□□□ -2.22
CCDC88CQ9P219 AL160275.3-201ENST00000423876 471 ntBASIC1.19□□□□□ -2.22
CCDC88CQ9P219 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC1.19□□□□□ -2.22
CCDC88CQ9P219 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC1.19□□□□□ -2.22
CCDC88CQ9P219 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC1.19□□□□□ -2.22
CCDC88CQ9P219 RPS29P28-201ENST00000446439 141 ntBASIC1.19□□□□□ -2.22
CCDC88CQ9P219 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.19□□□□□ -2.22
CCDC88CQ9P219 RNU1-98P-201ENST00000458992 160 ntBASIC1.19□□□□□ -2.22
CCDC88CQ9P219 AHI1-208ENST00000488690 712 ntTSL 5 BASIC1.19□□□□□ -2.22
CCDC88CQ9P219 RNU6-581P-201ENST00000516214 105 ntBASIC1.19□□□□□ -2.22
CCDC88CQ9P219 RNU5B-3P-201ENST00000516601 115 ntBASIC1.19□□□□□ -2.22
CCDC88CQ9P219 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC1.19□□□□□ -2.22
CCDC88CQ9P219 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC1.19□□□□□ -2.22
CCDC88CQ9P219 BNIP3P26-201ENST00000600827 554 ntBASIC1.19□□□□□ -2.22
CCDC88CQ9P219 AC245297.2-201ENST00000610119 565 ntBASIC1.19□□□□□ -2.22
CCDC88CQ9P219 RNU5E-10P-201ENST00000363506 118 ntBASIC1.18□□□□□ -2.22
CCDC88CQ9P219 Y_RNA.466-201ENST00000384294 113 ntBASIC1.18□□□□□ -2.22
CCDC88CQ9P219 RNA5SP465-201ENST00000391195 109 ntBASIC1.18□□□□□ -2.22
CCDC88CQ9P219 AL355143.1-201ENST00000407101 841 ntBASIC1.18□□□□□ -2.22
CCDC88CQ9P219 RNU2-62P-201ENST00000410868 191 ntBASIC1.18□□□□□ -2.22
CCDC88CQ9P219 RPS15AP12-201ENST00000419498 388 ntBASIC1.18□□□□□ -2.22
CCDC88CQ9P219 AL445669.1-201ENST00000426743 755 ntBASIC1.18□□□□□ -2.22
CCDC88CQ9P219 MTND5P25-201ENST00000430499 799 ntBASIC1.18□□□□□ -2.22
CCDC88CQ9P219 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC1.18□□□□□ -2.22
CCDC88CQ9P219 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC1.18□□□□□ -2.22
CCDC88CQ9P219 AC009238.1-201ENST00000442165 424 ntBASIC1.18□□□□□ -2.22
CCDC88CQ9P219 MTATP6P30-201ENST00000443540 664 ntBASIC1.18□□□□□ -2.22
CCDC88CQ9P219 AC009237.6-201ENST00000446969 424 ntBASIC1.18□□□□□ -2.22
CCDC88CQ9P219 AC114981.1-201ENST00000503897 678 ntBASIC1.18□□□□□ -2.22
CCDC88CQ9P219 MRPS33P3-201ENST00000513456 322 ntBASIC1.18□□□□□ -2.22
CCDC88CQ9P219 SMURF2P1-201ENST00000514992 481 ntBASIC1.18□□□□□ -2.22
CCDC88CQ9P219 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC1.18□□□□□ -2.22
CCDC88CQ9P219 UTP23-205ENST00000520733 369 ntTSL 3 BASIC1.18□□□□□ -2.22
CCDC88CQ9P219 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC1.18□□□□□ -2.22
CCDC88CQ9P219 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC1.18□□□□□ -2.22
CCDC88CQ9P219 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC1.18□□□□□ -2.22
CCDC88CQ9P219 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC1.18□□□□□ -2.22
CCDC88CQ9P219 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC1.18□□□□□ -2.22
CCDC88CQ9P219 BNIP3P27-201ENST00000599991 412 ntBASIC1.18□□□□□ -2.22
CCDC88CQ9P219 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC1.18□□□□□ -2.22
CCDC88CQ9P219 AC005014.3-201ENST00000605985 190 ntBASIC1.18□□□□□ -2.22
CCDC88CQ9P219 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC1.18□□□□□ -2.22
CCDC88CQ9P219 AC008121.3-201ENST00000618726 433 ntBASIC1.18□□□□□ -2.22
CCDC88CQ9P219 AC009269.6-201ENST00000621778 588 ntBASIC1.18□□□□□ -2.22
CCDC88CQ9P219 AC233981.2-201ENST00000611524 1614 ntBASIC1.18□□□□□ -2.22
CCDC88CQ9P219 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.18□□□□□ -2.22
CCDC88CQ9P219 RNU5E-1-201ENST00000362477 120 ntBASIC1.18□□□□□ -2.22
CCDC88CQ9P219 Y_RNA.192-201ENST00000363977 102 ntBASIC1.18□□□□□ -2.22
CCDC88CQ9P219 RNU6-906P-201ENST00000384700 70 ntBASIC1.18□□□□□ -2.22
CCDC88CQ9P219 MIR150-201ENST00000385048 84 ntBASIC1.18□□□□□ -2.22
CCDC88CQ9P219 MIR1305-201ENST00000408300 86 ntBASIC1.18□□□□□ -2.22
CCDC88CQ9P219 RNU6-516P-201ENST00000411381 104 ntBASIC1.18□□□□□ -2.22
CCDC88CQ9P219 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC1.18□□□□□ -2.22
CCDC88CQ9P219 UBE2FP1-201ENST00000416536 447 ntBASIC1.18□□□□□ -2.22
CCDC88CQ9P219 USP9YP18-201ENST00000425912 695 ntBASIC1.18□□□□□ -2.22
CCDC88CQ9P219 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC1.18□□□□□ -2.22
CCDC88CQ9P219 DNAJC19P4-201ENST00000440115 345 ntBASIC1.18□□□□□ -2.22
CCDC88CQ9P219 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC1.18□□□□□ -2.22
CCDC88CQ9P219 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC1.18□□□□□ -2.22
CCDC88CQ9P219 SNORA19.3-201ENST00000516165 130 ntBASIC1.18□□□□□ -2.22
CCDC88CQ9P219 AC109329.1-201ENST00000518744 317 ntBASIC1.18□□□□□ -2.22
CCDC88CQ9P219 DEFB108A-201ENST00000530110 222 ntBASIC1.18□□□□□ -2.22
CCDC88CQ9P219 OR5AL2P-201ENST00000532185 920 ntBASIC1.18□□□□□ -2.22
CCDC88CQ9P219 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 175.3 ms