Protein–RNA interactions for Protein: Q9NZI2

KCNIP1, Kv channel-interacting protein 1, humanhuman

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP1Q9NZI2 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
KCNIP1Q9NZI2 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC1.92□□□□□ -2.1
KCNIP1Q9NZI2 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC1.92□□□□□ -2.1
KCNIP1Q9NZI2 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
KCNIP1Q9NZI2 MIR412-201ENST00000362142 91 ntBASIC1.92□□□□□ -2.1
KCNIP1Q9NZI2 RNU6-371P-201ENST00000364283 108 ntBASIC1.92□□□□□ -2.1
KCNIP1Q9NZI2 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
KCNIP1Q9NZI2 SNORA40.3-201ENST00000390964 122 ntBASIC1.92□□□□□ -2.1
KCNIP1Q9NZI2 RNU6-1140P-201ENST00000410517 106 ntBASIC1.92□□□□□ -2.1
KCNIP1Q9NZI2 AC009518.2-201ENST00000418056 731 ntBASIC1.92□□□□□ -2.1
KCNIP1Q9NZI2 AL353621.1-201ENST00000418219 243 ntBASIC1.92□□□□□ -2.1
KCNIP1Q9NZI2 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC1.92□□□□□ -2.1
KCNIP1Q9NZI2 ISCA1P6-201ENST00000427740 390 ntBASIC1.92□□□□□ -2.1
KCNIP1Q9NZI2 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
KCNIP1Q9NZI2 AC000111.3-201ENST00000433478 193 ntBASIC1.92□□□□□ -2.1
KCNIP1Q9NZI2 RPS15AP28-201ENST00000435088 386 ntBASIC1.92□□□□□ -2.1
KCNIP1Q9NZI2 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC1.92□□□□□ -2.1
KCNIP1Q9NZI2 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC1.92□□□□□ -2.1
KCNIP1Q9NZI2 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC1.92□□□□□ -2.1
KCNIP1Q9NZI2 AC018437.1-201ENST00000492214 406 ntBASIC1.92□□□□□ -2.1
KCNIP1Q9NZI2 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC1.92□□□□□ -2.1
KCNIP1Q9NZI2 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC1.92□□□□□ -2.1
KCNIP1Q9NZI2 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC1.92□□□□□ -2.1
KCNIP1Q9NZI2 AF213884.2-201ENST00000510417 903 ntBASIC1.92□□□□□ -2.1
KCNIP1Q9NZI2 MIR892C-201ENST00000516410 77 ntBASIC1.92□□□□□ -2.1
KCNIP1Q9NZI2 RNU5B-3P-201ENST00000516601 115 ntBASIC1.92□□□□□ -2.1
KCNIP1Q9NZI2 Vault.3-201ENST00000516676 95 ntBASIC1.92□□□□□ -2.1
KCNIP1Q9NZI2 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC1.92□□□□□ -2.1
KCNIP1Q9NZI2 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC1.92□□□□□ -2.1
KCNIP1Q9NZI2 AP000889.2-201ENST00000532684 490 ntBASIC1.92□□□□□ -2.1
KCNIP1Q9NZI2 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC1.92□□□□□ -2.1
KCNIP1Q9NZI2 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC1.92□□□□□ -2.1
KCNIP1Q9NZI2 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC1.92□□□□□ -2.1
KCNIP1Q9NZI2 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC1.92□□□□□ -2.1
KCNIP1Q9NZI2 MTCYBP33-201ENST00000575007 1130 ntBASIC1.92□□□□□ -2.1
KCNIP1Q9NZI2 MIR548AC-201ENST00000585049 88 ntBASIC1.92□□□□□ -2.1
KCNIP1Q9NZI2 BNIP3P22-201ENST00000593399 556 ntBASIC1.92□□□□□ -2.1
KCNIP1Q9NZI2 AF131215.7-201ENST00000602443 707 ntBASIC1.92□□□□□ -2.1
KCNIP1Q9NZI2 AC103810.6-201ENST00000606708 136 ntBASIC1.92□□□□□ -2.1
KCNIP1Q9NZI2 AC245884.12-201ENST00000615364 59 ntBASIC1.92□□□□□ -2.1
KCNIP1Q9NZI2 AL359740.1-201ENST00000624340 592 ntBASIC1.92□□□□□ -2.1
KCNIP1Q9NZI2 AC019226.2-201ENST00000625973 424 ntBASIC1.92□□□□□ -2.1
KCNIP1Q9NZI2 CTSLP2-204ENST00000629029 392 ntBASIC1.92□□□□□ -2.1
KCNIP1Q9NZI2 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC1.92□□□□□ -2.1
KCNIP1Q9NZI2 AC005336.3-201ENST00000623833 2679 ntBASIC1.92□□□□□ -2.1
KCNIP1Q9NZI2 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.91□□□□□ -2.1
KCNIP1Q9NZI2 AP000568.1-201ENST00000282964 442 ntBASIC1.91□□□□□ -2.1
KCNIP1Q9NZI2 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
KCNIP1Q9NZI2 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
KCNIP1Q9NZI2 SNORA38-201ENST00000363946 132 ntBASIC1.91□□□□□ -2.1
KCNIP1Q9NZI2 RNU6-72P-201ENST00000384285 79 ntBASIC1.91□□□□□ -2.1
KCNIP1Q9NZI2 MIR10A-201ENST00000385043 110 ntBASIC1.91□□□□□ -2.1
KCNIP1Q9NZI2 UBE2V1P2-201ENST00000397758 440 ntBASIC1.91□□□□□ -2.1
KCNIP1Q9NZI2 AL591416.1-201ENST00000404015 867 ntBASIC1.91□□□□□ -2.1
KCNIP1Q9NZI2 RNU2-8P-201ENST00000410727 190 ntBASIC1.91□□□□□ -2.1
KCNIP1Q9NZI2 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC1.91□□□□□ -2.1
KCNIP1Q9NZI2 MTND3P17-201ENST00000416968 344 ntBASIC1.91□□□□□ -2.1
KCNIP1Q9NZI2 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC1.91□□□□□ -2.1
KCNIP1Q9NZI2 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC1.91□□□□□ -2.1
KCNIP1Q9NZI2 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC1.91□□□□□ -2.1
KCNIP1Q9NZI2 AL627311.1-201ENST00000431514 115 ntBASIC1.91□□□□□ -2.1
KCNIP1Q9NZI2 AC073614.1-201ENST00000438690 650 ntBASIC1.91□□□□□ -2.1
KCNIP1Q9NZI2 AL031659.1-201ENST00000447075 539 ntBASIC1.91□□□□□ -2.1
KCNIP1Q9NZI2 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC1.91□□□□□ -2.1
KCNIP1Q9NZI2 NDUFB1P2-201ENST00000449477 176 ntBASIC1.91□□□□□ -2.1
KCNIP1Q9NZI2 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
KCNIP1Q9NZI2 SNRPGP9-201ENST00000456025 225 ntBASIC1.91□□□□□ -2.1
KCNIP1Q9NZI2 SNRPFP4-201ENST00000456366 242 ntBASIC1.91□□□□□ -2.1
KCNIP1Q9NZI2 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC1.91□□□□□ -2.1
KCNIP1Q9NZI2 RN7SL636P-201ENST00000497504 294 ntBASIC1.91□□□□□ -2.1
KCNIP1Q9NZI2 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC1.91□□□□□ -2.1
KCNIP1Q9NZI2 RNU1-86P-201ENST00000516108 154 ntBASIC1.91□□□□□ -2.1
KCNIP1Q9NZI2 RNU1-107P-201ENST00000516617 154 ntBASIC1.91□□□□□ -2.1
KCNIP1Q9NZI2 RNU6-685P-201ENST00000517088 95 ntBASIC1.91□□□□□ -2.1
KCNIP1Q9NZI2 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC1.91□□□□□ -2.1
KCNIP1Q9NZI2 AP001646.1-201ENST00000527936 915 ntBASIC1.91□□□□□ -2.1
KCNIP1Q9NZI2 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
KCNIP1Q9NZI2 AC078814.3-201ENST00000553036 491 ntBASIC1.91□□□□□ -2.1
KCNIP1Q9NZI2 AL133241.1-201ENST00000556832 487 ntBASIC1.91□□□□□ -2.1
KCNIP1Q9NZI2 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC1.91□□□□□ -2.1
KCNIP1Q9NZI2 SNORD53-201ENST00000579969 78 ntBASIC1.91□□□□□ -2.1
KCNIP1Q9NZI2 MIR5007-201ENST00000583098 95 ntBASIC1.91□□□□□ -2.1
KCNIP1Q9NZI2 AL138889.2-201ENST00000603883 242 ntBASIC1.91□□□□□ -2.1
KCNIP1Q9NZI2 AL138963.2-201ENST00000605137 226 ntBASIC1.91□□□□□ -2.1
KCNIP1Q9NZI2 AL033523.1-201ENST00000605153 153 ntBASIC1.91□□□□□ -2.1
KCNIP1Q9NZI2 AC026790.2-201ENST00000606282 430 ntBASIC1.91□□□□□ -2.1
KCNIP1Q9NZI2 MIR6766-201ENST00000622641 72 ntBASIC1.91□□□□□ -2.1
KCNIP1Q9NZI2 AC025034.2-201ENST00000623264 286 ntBASIC1.91□□□□□ -2.1
KCNIP1Q9NZI2 AC092656.1-203ENST00000624134 423 ntBASIC1.91□□□□□ -2.1
KCNIP1Q9NZI2 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC1.91□□□□□ -2.1
KCNIP1Q9NZI2 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC1.91□□□□□ -2.1
KCNIP1Q9NZI2 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
KCNIP1Q9NZI2 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
KCNIP1Q9NZI2 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.9□□□□□ -2.1
KCNIP1Q9NZI2 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.9□□□□□ -2.11
KCNIP1Q9NZI2 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.9□□□□□ -2.11
KCNIP1Q9NZI2 RBBP8P1-201ENST00000449447 1844 ntBASIC1.9□□□□□ -2.11
KCNIP1Q9NZI2 Y_RNA.367-201ENST00000365544 101 ntBASIC1.9□□□□□ -2.11
KCNIP1Q9NZI2 RNU6-301P-201ENST00000384277 107 ntBASIC1.9□□□□□ -2.11
KCNIP1Q9NZI2 RNU1-148P-201ENST00000384472 162 ntBASIC1.9□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 91.9 ms