Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 AC069499.1-201ENST00000489433 509 ntBASIC4.21□□□□□ -1.74
PDLIM7Q9NR12 AC025445.1-201ENST00000502728 300 ntBASIC4.21□□□□□ -1.74
PDLIM7Q9NR12 AC008716.1-201ENST00000511084 513 ntBASIC4.21□□□□□ -1.74
PDLIM7Q9NR12 ACA59.1-201ENST00000515966 143 ntBASIC4.21□□□□□ -1.74
PDLIM7Q9NR12 RNU1-86P-201ENST00000516108 154 ntBASIC4.21□□□□□ -1.74
PDLIM7Q9NR12 RNU6-927P-201ENST00000516199 100 ntBASIC4.21□□□□□ -1.74
PDLIM7Q9NR12 RNA5SP164-201ENST00000516533 110 ntBASIC4.21□□□□□ -1.74
PDLIM7Q9NR12 SNORA40.14-201ENST00000516543 86 ntBASIC4.21□□□□□ -1.74
PDLIM7Q9NR12 RNU1-107P-201ENST00000516617 154 ntBASIC4.21□□□□□ -1.74
PDLIM7Q9NR12 RNA5SP471-201ENST00000516971 106 ntBASIC4.21□□□□□ -1.74
PDLIM7Q9NR12 MIR3690-201ENST00000580266 75 ntBASIC4.21□□□□□ -1.74
PDLIM7Q9NR12 MTND4LP5-201ENST00000605152 292 ntBASIC4.21□□□□□ -1.74
PDLIM7Q9NR12 AC123912.5-201ENST00000605470 343 ntBASIC4.21□□□□□ -1.74
PDLIM7Q9NR12 AL138825.1-201ENST00000618587 192 ntBASIC4.21□□□□□ -1.74
PDLIM7Q9NR12 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC4.21□□□□□ -1.74
PDLIM7Q9NR12 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC4.21□□□□□ -1.74
PDLIM7Q9NR12 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.21□□□□□ -1.74
PDLIM7Q9NR12 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
PDLIM7Q9NR12 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC4.21□□□□□ -1.74
PDLIM7Q9NR12 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC4.2□□□□□ -1.74
PDLIM7Q9NR12 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC4.2□□□□□ -1.74
PDLIM7Q9NR12 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC4.2□□□□□ -1.74
PDLIM7Q9NR12 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.2□□□□□ -1.74
PDLIM7Q9NR12 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
PDLIM7Q9NR12 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
PDLIM7Q9NR12 RNU6-512P-201ENST00000364438 103 ntBASIC4.2□□□□□ -1.74
PDLIM7Q9NR12 Y_RNA.461-201ENST00000384263 103 ntBASIC4.2□□□□□ -1.74
PDLIM7Q9NR12 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
PDLIM7Q9NR12 HIST1H2APS3-201ENST00000403259 134 ntBASIC4.2□□□□□ -1.74
PDLIM7Q9NR12 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC4.2□□□□□ -1.74
PDLIM7Q9NR12 OR2AQ1P-201ENST00000451972 200 ntBASIC4.2□□□□□ -1.74
PDLIM7Q9NR12 HSPE1P6-201ENST00000479457 291 ntBASIC4.2□□□□□ -1.74
PDLIM7Q9NR12 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC4.2□□□□□ -1.74
PDLIM7Q9NR12 AC022493.1-201ENST00000492984 337 ntBASIC4.2□□□□□ -1.74
PDLIM7Q9NR12 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC4.2□□□□□ -1.74
PDLIM7Q9NR12 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC4.2□□□□□ -1.74
PDLIM7Q9NR12 RNU2-53P-201ENST00000516257 147 ntBASIC4.2□□□□□ -1.74
PDLIM7Q9NR12 RNA5SP309-201ENST00000516670 106 ntBASIC4.2□□□□□ -1.74
PDLIM7Q9NR12 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC4.2□□□□□ -1.74
PDLIM7Q9NR12 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC4.2□□□□□ -1.74
PDLIM7Q9NR12 TRAV32-201ENST00000553993 340 ntBASIC4.2□□□□□ -1.74
PDLIM7Q9NR12 AL137849.1-201ENST00000604767 169 ntBASIC4.2□□□□□ -1.74
PDLIM7Q9NR12 MIR3976-201ENST00000606807 139 ntBASIC4.2□□□□□ -1.74
PDLIM7Q9NR12 MIR8058-201ENST00000615737 89 ntBASIC4.2□□□□□ -1.74
PDLIM7Q9NR12 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC4.2□□□□□ -1.74
PDLIM7Q9NR12 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC4.2□□□□□ -1.74
PDLIM7Q9NR12 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
PDLIM7Q9NR12 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC4.2□□□□□ -1.74
PDLIM7Q9NR12 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
PDLIM7Q9NR12 AL133383.2-201ENST00000622958 2336 ntBASIC4.2□□□□□ -1.74
PDLIM7Q9NR12 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC4.19□□□□□ -1.74
PDLIM7Q9NR12 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
PDLIM7Q9NR12 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
PDLIM7Q9NR12 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC4.19□□□□□ -1.74
PDLIM7Q9NR12 RNA5SP50-201ENST00000363731 107 ntBASIC4.19□□□□□ -1.74
PDLIM7Q9NR12 AL513331.1-201ENST00000411908 397 ntBASIC4.19□□□□□ -1.74
PDLIM7Q9NR12 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC4.19□□□□□ -1.74
PDLIM7Q9NR12 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC4.19□□□□□ -1.74
PDLIM7Q9NR12 ARL5AP4-201ENST00000430731 512 ntBASIC4.19□□□□□ -1.74
PDLIM7Q9NR12 AC073910.1-201ENST00000445047 438 ntBASIC4.19□□□□□ -1.74
PDLIM7Q9NR12 AP001486.1-201ENST00000463339 476 ntBASIC4.19□□□□□ -1.74
PDLIM7Q9NR12 RPS4XP13-201ENST00000483219 789 ntBASIC4.19□□□□□ -1.74
PDLIM7Q9NR12 Y_RNA.680-201ENST00000516441 93 ntBASIC4.19□□□□□ -1.74
PDLIM7Q9NR12 IGKV2D-23-201ENST00000518179 286 ntBASIC4.19□□□□□ -1.74
PDLIM7Q9NR12 IGHV3-76-201ENST00000522465 295 ntBASIC4.19□□□□□ -1.74
PDLIM7Q9NR12 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC4.19□□□□□ -1.74
PDLIM7Q9NR12 AC023157.2-201ENST00000540596 141 ntBASIC4.19□□□□□ -1.74
PDLIM7Q9NR12 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC4.19□□□□□ -1.74
PDLIM7Q9NR12 AC006600.1-201ENST00000572529 153 ntBASIC4.19□□□□□ -1.74
PDLIM7Q9NR12 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
PDLIM7Q9NR12 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC4.19□□□□□ -1.74
PDLIM7Q9NR12 AC138627.2-201ENST00000624202 601 ntBASIC4.19□□□□□ -1.74
PDLIM7Q9NR12 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC4.19□□□□□ -1.74
PDLIM7Q9NR12 AC233263.6-201ENST00000631132 1963 ntBASIC4.19□□□□□ -1.74
PDLIM7Q9NR12 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
PDLIM7Q9NR12 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
PDLIM7Q9NR12 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.19□□□□□ -1.74
PDLIM7Q9NR12 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
PDLIM7Q9NR12 MTND5P27-201ENST00000428871 1720 ntBASIC4.18□□□□□ -1.74
PDLIM7Q9NR12 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.18□□□□□ -1.74
PDLIM7Q9NR12 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC4.18□□□□□ -1.74
PDLIM7Q9NR12 RNU5A-1-201ENST00000362698 116 ntBASIC4.18□□□□□ -1.74
PDLIM7Q9NR12 Y_RNA.214-201ENST00000364201 112 ntBASIC4.18□□□□□ -1.74
PDLIM7Q9NR12 RNU6-933P-201ENST00000384424 107 ntBASIC4.18□□□□□ -1.74
PDLIM7Q9NR12 MT-TW-201ENST00000387382 68 ntBASIC4.18□□□□□ -1.74
PDLIM7Q9NR12 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
PDLIM7Q9NR12 HSPE1P26-201ENST00000405341 275 ntBASIC4.18□□□□□ -1.74
PDLIM7Q9NR12 RNA5SP129-201ENST00000410276 118 ntBASIC4.18□□□□□ -1.74
PDLIM7Q9NR12 RPL27AP8-201ENST00000424277 446 ntBASIC4.18□□□□□ -1.74
PDLIM7Q9NR12 CYCSP4-201ENST00000429682 331 ntBASIC4.18□□□□□ -1.74
PDLIM7Q9NR12 MTCO3P8-201ENST00000453691 755 ntBASIC4.18□□□□□ -1.74
PDLIM7Q9NR12 AC133473.1-201ENST00000455173 299 ntBASIC4.18□□□□□ -1.74
PDLIM7Q9NR12 SNORD105B-201ENST00000458770 79 ntBASIC4.18□□□□□ -1.74
PDLIM7Q9NR12 RNU6-1132P-201ENST00000459214 107 ntBASIC4.18□□□□□ -1.74
PDLIM7Q9NR12 RNU7-169P-201ENST00000459456 61 ntBASIC4.18□□□□□ -1.74
PDLIM7Q9NR12 AC087588.1-201ENST00000462203 316 ntBASIC4.18□□□□□ -1.74
PDLIM7Q9NR12 HMGN2P13-201ENST00000476476 274 ntBASIC4.18□□□□□ -1.74
PDLIM7Q9NR12 RPS26P15-201ENST00000488067 348 ntBASIC4.18□□□□□ -1.74
PDLIM7Q9NR12 AL049874.1-201ENST00000489560 388 ntBASIC4.18□□□□□ -1.74
PDLIM7Q9NR12 RPL23AP94-201ENST00000512518 302 ntBASIC4.18□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 145 ms