Protein–RNA interactions for Protein: Q9NNX9

VCX3A, Variable charge X-linked protein 3, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3AQ9NNX9 RN7SKP32-201ENST00000410167 303 ntBASIC1.51□□□□□ -2.17
VCX3AQ9NNX9 UBE2V1P10-201ENST00000414685 269 ntBASIC1.51□□□□□ -2.17
VCX3AQ9NNX9 AL645568.3-201ENST00000433683 316 ntBASIC1.51□□□□□ -2.17
VCX3AQ9NNX9 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC1.51□□□□□ -2.17
VCX3AQ9NNX9 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC1.51□□□□□ -2.17
VCX3AQ9NNX9 AC025750.2-201ENST00000442609 450 ntBASIC1.51□□□□□ -2.17
VCX3AQ9NNX9 AC108938.1-201ENST00000451204 136 ntBASIC1.51□□□□□ -2.17
VCX3AQ9NNX9 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC1.51□□□□□ -2.17
VCX3AQ9NNX9 snoU109.2-201ENST00000459316 135 ntBASIC1.51□□□□□ -2.17
VCX3AQ9NNX9 RPS3AP14-201ENST00000483907 780 ntBASIC1.51□□□□□ -2.17
VCX3AQ9NNX9 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC1.51□□□□□ -2.17
VCX3AQ9NNX9 AC008834.1-201ENST00000511612 175 ntBASIC1.51□□□□□ -2.17
VCX3AQ9NNX9 PTP4A1P4-201ENST00000512479 322 ntBASIC1.51□□□□□ -2.17
VCX3AQ9NNX9 AC109329.1-201ENST00000518744 317 ntBASIC1.51□□□□□ -2.17
VCX3AQ9NNX9 AP005597.4-201ENST00000526762 229 ntBASIC1.51□□□□□ -2.17
VCX3AQ9NNX9 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC1.51□□□□□ -2.17
VCX3AQ9NNX9 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC1.51□□□□□ -2.17
VCX3AQ9NNX9 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC1.51□□□□□ -2.17
VCX3AQ9NNX9 MIR3146-201ENST00000580367 79 ntBASIC1.51□□□□□ -2.17
VCX3AQ9NNX9 AC069431.2-201ENST00000604149 1099 ntBASIC1.51□□□□□ -2.17
VCX3AQ9NNX9 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC1.51□□□□□ -2.17
VCX3AQ9NNX9 ZNF355P-201ENST00000427301 3216 ntBASIC1.51□□□□□ -2.17
VCX3AQ9NNX9 ZNF736P3Y-201ENST00000428264 1465 ntBASIC1.5□□□□□ -2.17
VCX3AQ9NNX9 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
VCX3AQ9NNX9 AC092104.1-201ENST00000497346 1441 ntBASIC1.5□□□□□ -2.17
VCX3AQ9NNX9 Y_RNA.40-201ENST00000362645 93 ntBASIC1.5□□□□□ -2.17
VCX3AQ9NNX9 RNU6-511P-201ENST00000363496 107 ntBASIC1.5□□□□□ -2.17
VCX3AQ9NNX9 RNU6-944P-201ENST00000364023 107 ntBASIC1.5□□□□□ -2.17
VCX3AQ9NNX9 RNU5E-6P-201ENST00000365574 115 ntBASIC1.5□□□□□ -2.17
VCX3AQ9NNX9 SNORD14D-201ENST00000384390 87 ntBASIC1.5□□□□□ -2.17
VCX3AQ9NNX9 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC1.5□□□□□ -2.17
VCX3AQ9NNX9 AC009518.2-201ENST00000418056 731 ntBASIC1.5□□□□□ -2.17
VCX3AQ9NNX9 AC007098.1-201ENST00000420122 367 ntBASIC1.5□□□□□ -2.17
VCX3AQ9NNX9 AL365338.1-201ENST00000422282 858 ntBASIC1.5□□□□□ -2.17
VCX3AQ9NNX9 UBE2V1P4-201ENST00000425374 344 ntBASIC1.5□□□□□ -2.17
VCX3AQ9NNX9 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC1.5□□□□□ -2.17
VCX3AQ9NNX9 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC1.5□□□□□ -2.17
VCX3AQ9NNX9 MTND3P1-201ENST00000441336 220 ntBASIC1.5□□□□□ -2.17
VCX3AQ9NNX9 AC003071.1-201ENST00000451219 789 ntBASIC1.5□□□□□ -2.17
VCX3AQ9NNX9 SSXP1-201ENST00000453640 473 ntBASIC1.5□□□□□ -2.17
VCX3AQ9NNX9 AL121594.1-201ENST00000475906 575 ntBASIC1.5□□□□□ -2.17
VCX3AQ9NNX9 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC1.5□□□□□ -2.17
VCX3AQ9NNX9 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC1.5□□□□□ -2.17
VCX3AQ9NNX9 AC068587.4-201ENST00000533893 186 ntBASIC1.5□□□□□ -2.17
VCX3AQ9NNX9 AC023050.2-201ENST00000544968 387 ntBASIC1.5□□□□□ -2.17
VCX3AQ9NNX9 AL592221.1-201ENST00000605266 382 ntBASIC1.5□□□□□ -2.17
VCX3AQ9NNX9 AL355816.2-201ENST00000610049 647 ntBASIC1.5□□□□□ -2.17
VCX3AQ9NNX9 AP003485.2-201ENST00000623636 610 ntBASIC1.5□□□□□ -2.17
VCX3AQ9NNX9 MIR3529-201ENST00000637713 78 ntBASIC1.5□□□□□ -2.17
VCX3AQ9NNX9 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.49□□□□□ -2.17
VCX3AQ9NNX9 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.49□□□□□ -2.17
VCX3AQ9NNX9 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
VCX3AQ9NNX9 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC1.49□□□□□ -2.17
VCX3AQ9NNX9 Y_RNA.46-201ENST00000362695 102 ntBASIC1.49□□□□□ -2.17
VCX3AQ9NNX9 SNORD3E-201ENST00000362899 217 ntBASIC1.49□□□□□ -2.17
VCX3AQ9NNX9 RNU1-42P-201ENST00000364033 160 ntBASIC1.49□□□□□ -2.17
VCX3AQ9NNX9 RNU6-946P-201ENST00000383878 107 ntBASIC1.49□□□□□ -2.17
VCX3AQ9NNX9 RNU6-622P-201ENST00000384272 103 ntBASIC1.49□□□□□ -2.17
VCX3AQ9NNX9 MIR320A-201ENST00000385302 82 ntBASIC1.49□□□□□ -2.17
VCX3AQ9NNX9 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.49□□□□□ -2.17
VCX3AQ9NNX9 TEX41-202ENST00000414256 604 ntTSL 5 BASIC1.49□□□□□ -2.17
VCX3AQ9NNX9 AC009310.1-201ENST00000414414 451 ntBASIC1.49□□□□□ -2.17
VCX3AQ9NNX9 RPL23AP39-201ENST00000415533 405 ntBASIC1.49□□□□□ -2.17
VCX3AQ9NNX9 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC1.49□□□□□ -2.17
VCX3AQ9NNX9 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC1.49□□□□□ -2.17
VCX3AQ9NNX9 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.49□□□□□ -2.17
VCX3AQ9NNX9 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC1.49□□□□□ -2.17
VCX3AQ9NNX9 ZNF736P11Y-201ENST00000442535 1213 ntBASIC1.49□□□□□ -2.17
VCX3AQ9NNX9 HMGN2P23-201ENST00000456759 269 ntBASIC1.49□□□□□ -2.17
VCX3AQ9NNX9 AP001025.1-201ENST00000486139 332 ntBASIC1.49□□□□□ -2.17
VCX3AQ9NNX9 AC021146.2-201ENST00000504736 556 ntBASIC1.49□□□□□ -2.17
VCX3AQ9NNX9 AC119751.4-201ENST00000507498 357 ntBASIC1.49□□□□□ -2.17
VCX3AQ9NNX9 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC1.49□□□□□ -2.17
VCX3AQ9NNX9 AC114781.4-201ENST00000513707 639 ntBASIC1.49□□□□□ -2.17
VCX3AQ9NNX9 Y_RNA.675-201ENST00000516389 149 ntBASIC1.49□□□□□ -2.17
VCX3AQ9NNX9 RNU6-965P-201ENST00000516721 96 ntBASIC1.49□□□□□ -2.17
VCX3AQ9NNX9 RNU6-1092P-201ENST00000516955 87 ntBASIC1.49□□□□□ -2.17
VCX3AQ9NNX9 MIR4444-1-201ENST00000581696 74 ntBASIC1.49□□□□□ -2.17
VCX3AQ9NNX9 MIR4444-2-201ENST00000584390 74 ntBASIC1.49□□□□□ -2.17
VCX3AQ9NNX9 AC103710.2-201ENST00000609912 942 ntBASIC1.49□□□□□ -2.17
VCX3AQ9NNX9 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC1.49□□□□□ -2.17
VCX3AQ9NNX9 AC004808.1-201ENST00000627671 721 ntBASIC1.49□□□□□ -2.17
VCX3AQ9NNX9 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.49□□□□□ -2.17
VCX3AQ9NNX9 ZNF736P9Y-201ENST00000439586 1345 ntBASIC1.48□□□□□ -2.17
VCX3AQ9NNX9 RNU6-395P-201ENST00000365662 106 ntBASIC1.48□□□□□ -2.17
VCX3AQ9NNX9 SNORA64-201ENST00000384674 134 ntBASIC1.48□□□□□ -2.17
VCX3AQ9NNX9 AL033519.2-201ENST00000403958 392 ntBASIC1.48□□□□□ -2.17
VCX3AQ9NNX9 RN7SKP101-201ENST00000411376 320 ntBASIC1.48□□□□□ -2.17
VCX3AQ9NNX9 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC1.48□□□□□ -2.17
VCX3AQ9NNX9 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
VCX3AQ9NNX9 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC1.48□□□□□ -2.17
VCX3AQ9NNX9 MTCO3P5-201ENST00000433620 714 ntBASIC1.48□□□□□ -2.17
VCX3AQ9NNX9 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC1.48□□□□□ -2.17
VCX3AQ9NNX9 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC1.48□□□□□ -2.17
VCX3AQ9NNX9 HSPE1P24-201ENST00000450782 238 ntBASIC1.48□□□□□ -2.17
VCX3AQ9NNX9 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
VCX3AQ9NNX9 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC1.48□□□□□ -2.17
VCX3AQ9NNX9 AC126389.1-201ENST00000477436 290 ntBASIC1.48□□□□□ -2.17
VCX3AQ9NNX9 Y_RNA.689-201ENST00000516589 107 ntBASIC1.48□□□□□ -2.17
VCX3AQ9NNX9 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC1.48□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 117.9 ms