Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 SMIM11P1-201ENST00000369586 178 ntBASIC4□□□□□ -1.77
CD248Q9HCU0 Y_RNA.477-201ENST00000384352 108 ntBASIC4□□□□□ -1.77
CD248Q9HCU0 Y_RNA.483-201ENST00000384380 101 ntBASIC4□□□□□ -1.77
CD248Q9HCU0 MIR200C-201ENST00000384980 68 ntBASIC4□□□□□ -1.77
CD248Q9HCU0 RPL21P24-201ENST00000413752 448 ntBASIC4□□□□□ -1.77
CD248Q9HCU0 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC4□□□□□ -1.77
CD248Q9HCU0 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC4□□□□□ -1.77
CD248Q9HCU0 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC4□□□□□ -1.77
CD248Q9HCU0 SSXP4-201ENST00000451349 245 ntBASIC4□□□□□ -1.77
CD248Q9HCU0 RPL23AP14-201ENST00000468281 468 ntBASIC4□□□□□ -1.77
CD248Q9HCU0 AC087884.1-201ENST00000469738 328 ntBASIC4□□□□□ -1.77
CD248Q9HCU0 AC108860.1-201ENST00000484521 383 ntBASIC4□□□□□ -1.77
CD248Q9HCU0 GZMAP1-201ENST00000503054 631 ntBASIC4□□□□□ -1.77
CD248Q9HCU0 MTND1P19-201ENST00000511780 315 ntBASIC4□□□□□ -1.77
CD248Q9HCU0 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC4□□□□□ -1.77
CD248Q9HCU0 AC026403.1-201ENST00000518938 295 ntBASIC4□□□□□ -1.77
CD248Q9HCU0 AC100870.1-201ENST00000522035 505 ntBASIC4□□□□□ -1.77
CD248Q9HCU0 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC4□□□□□ -1.77
CD248Q9HCU0 AC025423.5-201ENST00000550230 219 ntBASIC4□□□□□ -1.77
CD248Q9HCU0 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC4□□□□□ -1.77
CD248Q9HCU0 AL158032.1-201ENST00000605401 106 ntBASIC4□□□□□ -1.77
CD248Q9HCU0 AL359547.2-201ENST00000615810 418 ntBASIC4□□□□□ -1.77
CD248Q9HCU0 5S_rRNA.12-201ENST00000617631 107 ntBASIC4□□□□□ -1.77
CD248Q9HCU0 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
CD248Q9HCU0 IPO8P1-201ENST00000455509 3109 ntBASIC4□□□□□ -1.77
CD248Q9HCU0 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC4□□□□□ -1.77
CD248Q9HCU0 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC4□□□□□ -1.77
CD248Q9HCU0 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC4□□□□□ -1.77
CD248Q9HCU0 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
CD248Q9HCU0 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
CD248Q9HCU0 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
CD248Q9HCU0 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC3.99□□□□□ -1.77
CD248Q9HCU0 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.99□□□□□ -1.77
CD248Q9HCU0 RNU6-263P-201ENST00000363811 107 ntBASIC3.99□□□□□ -1.77
CD248Q9HCU0 Y_RNA.276-201ENST00000364732 109 ntBASIC3.99□□□□□ -1.77
CD248Q9HCU0 RNU6-637P-201ENST00000384050 107 ntBASIC3.99□□□□□ -1.77
CD248Q9HCU0 RNU6-754P-201ENST00000391166 107 ntBASIC3.99□□□□□ -1.77
CD248Q9HCU0 U3.29-201ENST00000391296 212 ntBASIC3.99□□□□□ -1.77
CD248Q9HCU0 UBE2FP1-201ENST00000416536 447 ntBASIC3.99□□□□□ -1.77
CD248Q9HCU0 AC083863.1-201ENST00000438811 231 ntBASIC3.99□□□□□ -1.77
CD248Q9HCU0 AC011816.1-201ENST00000441346 546 ntBASIC3.99□□□□□ -1.77
CD248Q9HCU0 RPL39P38-201ENST00000467018 153 ntBASIC3.99□□□□□ -1.77
CD248Q9HCU0 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.99□□□□□ -1.77
CD248Q9HCU0 AC105758.1-201ENST00000506038 399 ntBASIC3.99□□□□□ -1.77
CD248Q9HCU0 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC3.99□□□□□ -1.77
CD248Q9HCU0 RNU6-27P-201ENST00000516146 107 ntBASIC3.99□□□□□ -1.77
CD248Q9HCU0 AC040926.1-201ENST00000530195 238 ntBASIC3.99□□□□□ -1.77
CD248Q9HCU0 HSPE1P20-201ENST00000538133 289 ntBASIC3.99□□□□□ -1.77
CD248Q9HCU0 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC3.99□□□□□ -1.77
CD248Q9HCU0 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC3.99□□□□□ -1.77
CD248Q9HCU0 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC3.99□□□□□ -1.77
CD248Q9HCU0 AC022968.1-201ENST00000567372 442 ntBASIC3.99□□□□□ -1.77
CD248Q9HCU0 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC3.99□□□□□ -1.77
CD248Q9HCU0 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC3.99□□□□□ -1.77
CD248Q9HCU0 AC069200.1-201ENST00000609511 323 ntBASIC3.99□□□□□ -1.77
CD248Q9HCU0 RMST_8.1-201ENST00000610287 165 ntBASIC3.99□□□□□ -1.77
CD248Q9HCU0 RNVU1-4-201ENST00000612985 164 ntBASIC3.99□□□□□ -1.77
CD248Q9HCU0 SNHG22-203ENST00000617833 660 ntBASIC3.99□□□□□ -1.77
CD248Q9HCU0 AC091925.2-201ENST00000625059 256 ntBASIC3.99□□□□□ -1.77
CD248Q9HCU0 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.99□□□□□ -1.77
CD248Q9HCU0 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.99□□□□□ -1.77
CD248Q9HCU0 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
CD248Q9HCU0 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
CD248Q9HCU0 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
CD248Q9HCU0 SNORA63.1-201ENST00000362493 131 ntBASIC3.98□□□□□ -1.77
CD248Q9HCU0 RNU6-1249P-201ENST00000363237 111 ntBASIC3.98□□□□□ -1.77
CD248Q9HCU0 Y_RNA.376-201ENST00000365638 108 ntBASIC3.98□□□□□ -1.77
CD248Q9HCU0 RNU6-842P-201ENST00000384269 107 ntBASIC3.98□□□□□ -1.77
CD248Q9HCU0 SNORA57.3-201ENST00000411095 141 ntBASIC3.98□□□□□ -1.77
CD248Q9HCU0 MTATP6P29-201ENST00000415057 132 ntBASIC3.98□□□□□ -1.77
CD248Q9HCU0 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.98□□□□□ -1.77
CD248Q9HCU0 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC3.98□□□□□ -1.77
CD248Q9HCU0 RPS29P31-201ENST00000446147 164 ntBASIC3.98□□□□□ -1.77
CD248Q9HCU0 AL590664.1-201ENST00000448065 339 ntBASIC3.98□□□□□ -1.77
CD248Q9HCU0 AC084198.1-201ENST00000477747 402 ntBASIC3.98□□□□□ -1.77
CD248Q9HCU0 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC3.98□□□□□ -1.77
CD248Q9HCU0 AC025465.3-201ENST00000510570 311 ntBASIC3.98□□□□□ -1.77
CD248Q9HCU0 RNU1-95P-201ENST00000516357 160 ntBASIC3.98□□□□□ -1.77
CD248Q9HCU0 SNORA40.14-201ENST00000516543 86 ntBASIC3.98□□□□□ -1.77
CD248Q9HCU0 RNU1-128P-201ENST00000516704 160 ntBASIC3.98□□□□□ -1.77
CD248Q9HCU0 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC3.98□□□□□ -1.77
CD248Q9HCU0 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC3.98□□□□□ -1.77
CD248Q9HCU0 AC096772.1-201ENST00000609146 564 ntBASIC3.98□□□□□ -1.77
CD248Q9HCU0 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.98□□□□□ -1.77
CD248Q9HCU0 MIR4272-201ENST00000635924 64 ntBASIC3.98□□□□□ -1.77
CD248Q9HCU0 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
CD248Q9HCU0 ZNF285B-201ENST00000561698 1767 ntBASIC3.98□□□□□ -1.77
CD248Q9HCU0 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
CD248Q9HCU0 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.98□□□□□ -1.77
CD248Q9HCU0 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
CD248Q9HCU0 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
CD248Q9HCU0 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
CD248Q9HCU0 AL137003.2-201ENST00000606924 2538 ntBASIC3.97□□□□□ -1.77
CD248Q9HCU0 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC3.97□□□□□ -1.77
CD248Q9HCU0 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.97□□□□□ -1.77
CD248Q9HCU0 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.97□□□□□ -1.77
CD248Q9HCU0 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
CD248Q9HCU0 SNORD35B-201ENST00000363660 87 ntBASIC3.97□□□□□ -1.77
CD248Q9HCU0 Y_RNA.214-201ENST00000364201 112 ntBASIC3.97□□□□□ -1.77
CD248Q9HCU0 RNU6-200P-201ENST00000364743 107 ntBASIC3.97□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 208.7 ms