Protein–RNA interactions for Protein: Q9BRZ2

TRIM56, E3 ubiquitin-protein ligase TRIM56, humanhuman

Known RBP Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56Q9BRZ2 Y_RNA.269-201ENST00000364685 89 ntBASIC4.46□□□□□ -1.7
TRIM56Q9BRZ2 RNA5SP22-201ENST00000365393 109 ntBASIC4.46□□□□□ -1.7
TRIM56Q9BRZ2 SNORA70F-201ENST00000384142 135 ntBASIC4.46□□□□□ -1.7
TRIM56Q9BRZ2 RNU6-72P-201ENST00000384285 79 ntBASIC4.46□□□□□ -1.7
TRIM56Q9BRZ2 RNU6-378P-201ENST00000384324 107 ntBASIC4.46□□□□□ -1.7
TRIM56Q9BRZ2 RNU6-140P-201ENST00000384566 108 ntBASIC4.46□□□□□ -1.7
TRIM56Q9BRZ2 RNA5SP397-201ENST00000391323 118 ntBASIC4.46□□□□□ -1.7
TRIM56Q9BRZ2 MIR1298-201ENST00000408783 112 ntBASIC4.46□□□□□ -1.7
TRIM56Q9BRZ2 AL139156.1-201ENST00000412785 841 ntBASIC4.46□□□□□ -1.7
TRIM56Q9BRZ2 RPL21P40-201ENST00000428586 483 ntBASIC4.46□□□□□ -1.7
TRIM56Q9BRZ2 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC4.46□□□□□ -1.7
TRIM56Q9BRZ2 NDUFB4P6-201ENST00000436819 366 ntBASIC4.46□□□□□ -1.7
TRIM56Q9BRZ2 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC4.46□□□□□ -1.7
TRIM56Q9BRZ2 AL132838.2-201ENST00000492041 314 ntBASIC4.46□□□□□ -1.7
TRIM56Q9BRZ2 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC4.46□□□□□ -1.7
TRIM56Q9BRZ2 IGHVII-53-1-201ENST00000519538 255 ntBASIC4.46□□□□□ -1.7
TRIM56Q9BRZ2 RPL23AP97-201ENST00000568955 471 ntBASIC4.46□□□□□ -1.7
TRIM56Q9BRZ2 AC090617.3-201ENST00000573670 475 ntBASIC4.46□□□□□ -1.7
TRIM56Q9BRZ2 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC4.46□□□□□ -1.7
TRIM56Q9BRZ2 AC083809.1-201ENST00000615051 472 ntBASIC4.46□□□□□ -1.7
TRIM56Q9BRZ2 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
TRIM56Q9BRZ2 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC4.46□□□□□ -1.7
TRIM56Q9BRZ2 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC4.46□□□□□ -1.7
TRIM56Q9BRZ2 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
TRIM56Q9BRZ2 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.46□□□□□ -1.7
TRIM56Q9BRZ2 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.7
TRIM56Q9BRZ2 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
TRIM56Q9BRZ2 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC4.46□□□□□ -1.7
TRIM56Q9BRZ2 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
TRIM56Q9BRZ2 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC4.45□□□□□ -1.7
TRIM56Q9BRZ2 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
TRIM56Q9BRZ2 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC4.45□□□□□ -1.7
TRIM56Q9BRZ2 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
TRIM56Q9BRZ2 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC4.45□□□□□ -1.7
TRIM56Q9BRZ2 Y_RNA.83-201ENST00000363005 113 ntBASIC4.45□□□□□ -1.7
TRIM56Q9BRZ2 RNU4-9P-201ENST00000364951 139 ntBASIC4.45□□□□□ -1.7
TRIM56Q9BRZ2 RNU6-217P-201ENST00000384164 104 ntBASIC4.45□□□□□ -1.7
TRIM56Q9BRZ2 SNORA19-201ENST00000384737 128 ntBASIC4.45□□□□□ -1.7
TRIM56Q9BRZ2 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
TRIM56Q9BRZ2 MIR1911-201ENST00000410783 80 ntBASIC4.45□□□□□ -1.7
TRIM56Q9BRZ2 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC4.45□□□□□ -1.7
TRIM56Q9BRZ2 AC004552.1-201ENST00000419089 348 ntBASIC4.45□□□□□ -1.7
TRIM56Q9BRZ2 RPL17P36-201ENST00000420302 549 ntBASIC4.45□□□□□ -1.7
TRIM56Q9BRZ2 RPEP3-201ENST00000425462 676 ntBASIC4.45□□□□□ -1.7
TRIM56Q9BRZ2 GAS5-208ENST00000425771 242 ntTSL 3 BASIC4.45□□□□□ -1.7
TRIM56Q9BRZ2 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC4.45□□□□□ -1.7
TRIM56Q9BRZ2 ATP6V0E1P2-201ENST00000441771 245 ntBASIC4.45□□□□□ -1.7
TRIM56Q9BRZ2 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC4.45□□□□□ -1.7
TRIM56Q9BRZ2 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC4.45□□□□□ -1.7
TRIM56Q9BRZ2 RPS26P3-201ENST00000470205 348 ntBASIC4.45□□□□□ -1.7
TRIM56Q9BRZ2 AC090543.2-201ENST00000483963 348 ntBASIC4.45□□□□□ -1.7
TRIM56Q9BRZ2 AC004057.1-201ENST00000485827 348 ntBASIC4.45□□□□□ -1.7
TRIM56Q9BRZ2 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.45□□□□□ -1.7
TRIM56Q9BRZ2 AC010265.1-201ENST00000513509 211 ntBASIC4.45□□□□□ -1.7
TRIM56Q9BRZ2 HSPE1P5-201ENST00000561489 272 ntBASIC4.45□□□□□ -1.7
TRIM56Q9BRZ2 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC4.45□□□□□ -1.7
TRIM56Q9BRZ2 AC136624.4-201ENST00000573044 370 ntBASIC4.45□□□□□ -1.7
TRIM56Q9BRZ2 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC4.45□□□□□ -1.7
TRIM56Q9BRZ2 U2.14-201ENST00000615943 113 ntBASIC4.45□□□□□ -1.7
TRIM56Q9BRZ2 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.44□□□□□ -1.7
TRIM56Q9BRZ2 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
TRIM56Q9BRZ2 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
TRIM56Q9BRZ2 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
TRIM56Q9BRZ2 MFSD8-242ENST00000641690 4199 ntBASIC4.44□□□□□ -1.7
TRIM56Q9BRZ2 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
TRIM56Q9BRZ2 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.44□□□□□ -1.7
TRIM56Q9BRZ2 Y_RNA.16-201ENST00000362421 102 ntBASIC4.44□□□□□ -1.7
TRIM56Q9BRZ2 RNU6-600P-201ENST00000362524 99 ntBASIC4.44□□□□□ -1.7
TRIM56Q9BRZ2 RNU6-336P-201ENST00000364891 107 ntBASIC4.44□□□□□ -1.7
TRIM56Q9BRZ2 RNU6-662P-201ENST00000384253 104 ntBASIC4.44□□□□□ -1.7
TRIM56Q9BRZ2 Y_RNA.464-201ENST00000384282 110 ntBASIC4.44□□□□□ -1.7
TRIM56Q9BRZ2 Y_RNA.541-201ENST00000384640 113 ntBASIC4.44□□□□□ -1.7
TRIM56Q9BRZ2 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
TRIM56Q9BRZ2 SNORA74C-2-201ENST00000411179 201 ntBASIC4.44□□□□□ -1.7
TRIM56Q9BRZ2 RPL26P27-201ENST00000414397 437 ntBASIC4.44□□□□□ -1.7
TRIM56Q9BRZ2 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.44□□□□□ -1.7
TRIM56Q9BRZ2 RPS6P12-201ENST00000432491 726 ntBASIC4.44□□□□□ -1.7
TRIM56Q9BRZ2 AL512844.2-201ENST00000433990 593 ntBASIC4.44□□□□□ -1.7
TRIM56Q9BRZ2 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC4.44□□□□□ -1.7
TRIM56Q9BRZ2 AL356535.1-201ENST00000440335 398 ntBASIC4.44□□□□□ -1.7
TRIM56Q9BRZ2 Y_RNA.644-201ENST00000459006 113 ntBASIC4.44□□□□□ -1.7
TRIM56Q9BRZ2 snoU13.1-201ENST00000459157 104 ntBASIC4.44□□□□□ -1.7
TRIM56Q9BRZ2 RPL21P126-201ENST00000470049 478 ntBASIC4.44□□□□□ -1.7
TRIM56Q9BRZ2 S100A11P1-201ENST00000477525 312 ntBASIC4.44□□□□□ -1.7
TRIM56Q9BRZ2 Y_RNA.674-201ENST00000516362 113 ntBASIC4.44□□□□□ -1.7
TRIM56Q9BRZ2 SNORA31.18-201ENST00000517043 134 ntBASIC4.44□□□□□ -1.7
TRIM56Q9BRZ2 AP004607.1-201ENST00000524456 203 ntBASIC4.44□□□□□ -1.7
TRIM56Q9BRZ2 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC4.44□□□□□ -1.7
TRIM56Q9BRZ2 AC060766.3-201ENST00000591442 263 ntBASIC4.44□□□□□ -1.7
TRIM56Q9BRZ2 FTX_3.1-201ENST00000610451 147 ntBASIC4.44□□□□□ -1.7
TRIM56Q9BRZ2 AC240442.1-201ENST00000616055 283 ntBASIC4.44□□□□□ -1.7
TRIM56Q9BRZ2 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.44□□□□□ -1.7
TRIM56Q9BRZ2 U6.99-201ENST00000637524 83 ntBASIC4.44□□□□□ -1.7
TRIM56Q9BRZ2 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.44□□□□□ -1.7
TRIM56Q9BRZ2 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC4.44□□□□□ -1.7
TRIM56Q9BRZ2 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
TRIM56Q9BRZ2 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.44□□□□□ -1.7
TRIM56Q9BRZ2 FAM35BP-202ENST00000497389 3337 ntBASIC4.44□□□□□ -1.7
TRIM56Q9BRZ2 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
TRIM56Q9BRZ2 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 107.4 ms