Protein–RNA interactions for Protein: Q96T58

SPEN, Msx2-interacting protein, humanhuman

Known RBP Predictions only

Length 3,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPENQ96T58 Z77249.1-201ENST00000444622 1175 ntBASIC0.08□□□□□ -2.4
SPENQ96T58 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC0.08□□□□□ -2.4
SPENQ96T58 Y_RNA.659-201ENST00000515994 113 ntBASIC0.08□□□□□ -2.4
SPENQ96T58 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC0.08□□□□□ -2.4
SPENQ96T58 MTCYBP22-201ENST00000603788 447 ntBASIC0.08□□□□□ -2.4
SPENQ96T58 AL355810.1-201ENST00000614629 552 ntBASIC0.08□□□□□ -2.4
SPENQ96T58 U4.2-201ENST00000618561 85 ntBASIC0.08□□□□□ -2.4
SPENQ96T58 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC0.08□□□□□ -2.4
SPENQ96T58 RNU6-348P-201ENST00000384386 107 ntBASIC0.08□□□□□ -2.4
SPENQ96T58 MIR1295A-201ENST00000408463 79 ntBASIC0.08□□□□□ -2.4
SPENQ96T58 RNA5SP451-201ENST00000410588 110 ntBASIC0.08□□□□□ -2.4
SPENQ96T58 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC0.08□□□□□ -2.4
SPENQ96T58 RPL21P47-201ENST00000483696 477 ntBASIC0.08□□□□□ -2.4
SPENQ96T58 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC0.08□□□□□ -2.4
SPENQ96T58 AL158211.1-201ENST00000566763 763 ntBASIC0.08□□□□□ -2.4
SPENQ96T58 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC0.07□□□□□ -2.4
SPENQ96T58 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC0.07□□□□□ -2.4
SPENQ96T58 HMGN2P39-201ENST00000398005 273 ntBASIC0.07□□□□□ -2.4
SPENQ96T58 ZNF736P11Y-201ENST00000442535 1213 ntBASIC0.07□□□□□ -2.4
SPENQ96T58 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC0.07□□□□□ -2.4
SPENQ96T58 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC0.07□□□□□ -2.4
SPENQ96T58 FARSBP1-201ENST00000435808 1778 ntBASIC0.07□□□□□ -2.4
SPENQ96T58 MIR493-201ENST00000385254 89 ntBASIC0.07□□□□□ -2.4
SPENQ96T58 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC0.07□□□□□ -2.4
SPENQ96T58 AL049830.1-201ENST00000468034 425 ntBASIC0.07□□□□□ -2.4
SPENQ96T58 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC0.07□□□□□ -2.4
SPENQ96T58 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC0.07□□□□□ -2.4
SPENQ96T58 AC092423.1-201ENST00000430165 186 ntBASIC0.07□□□□□ -2.4
SPENQ96T58 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC0.07□□□□□ -2.4
SPENQ96T58 COX6CP6-201ENST00000490840 228 ntBASIC0.07□□□□□ -2.4
SPENQ96T58 IGKV1-22-201ENST00000524313 326 ntBASIC0.07□□□□□ -2.4
SPENQ96T58 uc_338.6-201ENST00000613544 171 ntBASIC0.07□□□□□ -2.4
SPENQ96T58 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC0.07□□□□□ -2.4
SPENQ96T58 RNU5D-1-201ENST00000363299 116 ntBASIC0.06□□□□□ -2.4
SPENQ96T58 RNU6-220P-201ENST00000390919 107 ntBASIC0.06□□□□□ -2.4
SPENQ96T58 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC0.06□□□□□ -2.4
SPENQ96T58 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC0.06□□□□□ -2.4
SPENQ96T58 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC0.06□□□□□ -2.4
SPENQ96T58 MIR5739-201ENST00000619803 80 ntBASIC0.06□□□□□ -2.4
SPENQ96T58 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC0.06□□□□□ -2.4
SPENQ96T58 EIF4EP2-201ENST00000422816 654 ntBASIC0.06□□□□□ -2.4
SPENQ96T58 AC107626.1-201ENST00000471084 183 ntBASIC0.06□□□□□ -2.4
SPENQ96T58 RPS26P55-201ENST00000471178 356 ntBASIC0.06□□□□□ -2.4
SPENQ96T58 MIR8074-201ENST00000615081 81 ntBASIC0.06□□□□□ -2.4
SPENQ96T58 AC096656.1-201ENST00000623826 1364 ntBASIC0.06□□□□□ -2.4
SPENQ96T58 U3.9-201ENST00000363823 204 ntBASIC0.06□□□□□ -2.4
SPENQ96T58 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC0.06□□□□□ -2.4
SPENQ96T58 HNRNPDP2-201ENST00000406475 478 ntBASIC0.06□□□□□ -2.4
SPENQ96T58 SSR1P1-201ENST00000407630 814 ntBASIC0.06□□□□□ -2.4
SPENQ96T58 MTND4LP11-201ENST00000422184 280 ntBASIC0.06□□□□□ -2.4
SPENQ96T58 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC0.06□□□□□ -2.4
SPENQ96T58 AL096803.2-201ENST00000450032 677 ntBASIC0.06□□□□□ -2.4
SPENQ96T58 snoU13.25-201ENST00000458945 104 ntBASIC0.06□□□□□ -2.4
SPENQ96T58 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC0.06□□□□□ -2.4
SPENQ96T58 AC100812.1-201ENST00000607622 580 ntBASIC0.06□□□□□ -2.4
SPENQ96T58 Y_RNA.468-201ENST00000384298 102 ntBASIC0.05□□□□□ -2.4
SPENQ96T58 RNU2-63P-201ENST00000410792 194 ntBASIC0.05□□□□□ -2.4
SPENQ96T58 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC0.05□□□□□ -2.4
SPENQ96T58 AL109913.1-201ENST00000421173 514 ntBASIC0.05□□□□□ -2.4
SPENQ96T58 MICF-203ENST00000432679 129 ntBASIC0.05□□□□□ -2.4
SPENQ96T58 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC0.05□□□□□ -2.4
SPENQ96T58 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC0.05□□□□□ -2.4
SPENQ96T58 AC145146.1-201ENST00000496370 254 ntBASIC0.05□□□□□ -2.4
SPENQ96T58 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC0.05□□□□□ -2.4
SPENQ96T58 SCARNA16.5-201ENST00000517114 183 ntBASIC0.05□□□□□ -2.4
SPENQ96T58 AC022254.1-201ENST00000567857 235 ntBASIC0.05□□□□□ -2.4
SPENQ96T58 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC0.05□□□□□ -2.4
SPENQ96T58 AC093838.1-201ENST00000613014 469 ntBASIC0.05□□□□□ -2.4
SPENQ96T58 AL360181.4-201ENST00000621752 134 ntBASIC0.05□□□□□ -2.4
SPENQ96T58 RNU6-110P-201ENST00000384508 104 ntBASIC0.05□□□□□ -2.4
SPENQ96T58 RNU6-1328P-201ENST00000410938 106 ntBASIC0.05□□□□□ -2.4
SPENQ96T58 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC0.05□□□□□ -2.4
SPENQ96T58 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC0.05□□□□□ -2.4
SPENQ96T58 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC0.05□□□□□ -2.4
SPENQ96T58 AC105224.1-201ENST00000587055 421 ntBASIC0.05□□□□□ -2.4
SPENQ96T58 AC113194.1-201ENST00000606037 500 ntBASIC0.05□□□□□ -2.4
SPENQ96T58 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC0.05□□□□□ -2.4
SPENQ96T58 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC0.05□□□□□ -2.4
SPENQ96T58 Y_RNA.551-201ENST00000384661 102 ntBASIC0.05□□□□□ -2.4
SPENQ96T58 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC0.05□□□□□ -2.4
SPENQ96T58 NDUFB4P10-201ENST00000452541 359 ntBASIC0.05□□□□□ -2.4
SPENQ96T58 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC0.05□□□□□ -2.4
SPENQ96T58 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC0.05□□□□□ -2.4
SPENQ96T58 MIR3678-201ENST00000578455 94 ntBASIC0.05□□□□□ -2.4
SPENQ96T58 AC004852.3-201ENST00000614131 326 ntBASIC0.05□□□□□ -2.4
SPENQ96T58 AL078604.3-201ENST00000615580 211 ntBASIC0.05□□□□□ -2.4
SPENQ96T58 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC0.05□□□□□ -2.4
SPENQ96T58 Y_RNA.583-201ENST00000391033 113 ntBASIC0.04□□□□□ -2.4
SPENQ96T58 RNU7-40P-201ENST00000516397 64 ntBASIC0.04□□□□□ -2.4
SPENQ96T58 SCARNA16.2-201ENST00000516520 172 ntBASIC0.04□□□□□ -2.4
SPENQ96T58 RN7SKP287-201ENST00000516546 266 ntBASIC0.04□□□□□ -2.4
SPENQ96T58 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC0.04□□□□□ -2.4
SPENQ96T58 DUXAP1-201ENST00000556632 463 ntBASIC0.04□□□□□ -2.4
SPENQ96T58 RNU6-654P-201ENST00000364373 107 ntBASIC0.04□□□□□ -2.4
SPENQ96T58 Y_RNA.495-201ENST00000384435 112 ntBASIC0.04□□□□□ -2.4
SPENQ96T58 PTGES3P4-201ENST00000426243 356 ntBASIC0.04□□□□□ -2.4
SPENQ96T58 BTF3P11-201ENST00000426582 477 ntBASIC0.04□□□□□ -2.4
SPENQ96T58 COX7A2P2-201ENST00000505291 250 ntBASIC0.04□□□□□ -2.4
SPENQ96T58 AC009712.1-201ENST00000564938 316 ntBASIC0.04□□□□□ -2.4
SPENQ96T58 NAA50-211ENST00000630058 177 ntTSL 5 BASIC0.04□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 88.6 ms