Protein–RNA interactions for Protein: Q96NY8

NECTIN4, Nectin-4, humanhuman

Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN4Q96NY8 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.75□□□□□ -1.97
NECTIN4Q96NY8 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
NECTIN4Q96NY8 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
NECTIN4Q96NY8 AC103710.2-202ENST00000641454 2853 ntBASIC2.75□□□□□ -1.97
NECTIN4Q96NY8 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
NECTIN4Q96NY8 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC2.74□□□□□ -1.97
NECTIN4Q96NY8 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC2.74□□□□□ -1.97
NECTIN4Q96NY8 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.74□□□□□ -1.97
NECTIN4Q96NY8 AL139276.1-201ENST00000311910 1001 ntBASIC2.74□□□□□ -1.97
NECTIN4Q96NY8 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
NECTIN4Q96NY8 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.74□□□□□ -1.97
NECTIN4Q96NY8 RNU6-1167P-201ENST00000363227 94 ntBASIC2.74□□□□□ -1.97
NECTIN4Q96NY8 Y_RNA.409-201ENST00000383990 98 ntBASIC2.74□□□□□ -1.97
NECTIN4Q96NY8 Y_RNA.534-201ENST00000384599 112 ntBASIC2.74□□□□□ -1.97
NECTIN4Q96NY8 MIR627-201ENST00000384979 97 ntBASIC2.74□□□□□ -1.97
NECTIN4Q96NY8 MIR27B-201ENST00000385129 97 ntBASIC2.74□□□□□ -1.97
NECTIN4Q96NY8 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
NECTIN4Q96NY8 RNU6-1158P-201ENST00000391167 107 ntBASIC2.74□□□□□ -1.97
NECTIN4Q96NY8 SNORA26.7-201ENST00000391288 122 ntBASIC2.74□□□□□ -1.97
NECTIN4Q96NY8 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC2.74□□□□□ -1.97
NECTIN4Q96NY8 RNA5SP492-201ENST00000411330 114 ntBASIC2.74□□□□□ -1.97
NECTIN4Q96NY8 RPS12P24-201ENST00000412619 387 ntBASIC2.74□□□□□ -1.97
NECTIN4Q96NY8 RPLP0P7-201ENST00000416050 667 ntBASIC2.74□□□□□ -1.97
NECTIN4Q96NY8 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC2.74□□□□□ -1.97
NECTIN4Q96NY8 AC009963.1-201ENST00000417265 157 ntBASIC2.74□□□□□ -1.97
NECTIN4Q96NY8 Z98742.3-201ENST00000418637 326 ntBASIC2.74□□□□□ -1.97
NECTIN4Q96NY8 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC2.74□□□□□ -1.97
NECTIN4Q96NY8 AC009414.1-201ENST00000427200 443 ntBASIC2.74□□□□□ -1.97
NECTIN4Q96NY8 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.74□□□□□ -1.97
NECTIN4Q96NY8 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
NECTIN4Q96NY8 AC003071.1-201ENST00000451219 789 ntBASIC2.74□□□□□ -1.97
NECTIN4Q96NY8 AC126182.1-201ENST00000478134 357 ntBASIC2.74□□□□□ -1.97
NECTIN4Q96NY8 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC2.74□□□□□ -1.97
NECTIN4Q96NY8 Y_RNA.693-201ENST00000516641 110 ntBASIC2.74□□□□□ -1.97
NECTIN4Q96NY8 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC2.74□□□□□ -1.97
NECTIN4Q96NY8 AC022634.1-201ENST00000520765 532 ntBASIC2.74□□□□□ -1.97
NECTIN4Q96NY8 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC2.74□□□□□ -1.97
NECTIN4Q96NY8 OR4R1P-201ENST00000529879 463 ntBASIC2.74□□□□□ -1.97
NECTIN4Q96NY8 AC007536.1-201ENST00000533382 349 ntBASIC2.74□□□□□ -1.97
NECTIN4Q96NY8 AK6P1-201ENST00000540219 478 ntBASIC2.74□□□□□ -1.97
NECTIN4Q96NY8 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC2.74□□□□□ -1.97
NECTIN4Q96NY8 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC2.74□□□□□ -1.97
NECTIN4Q96NY8 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC2.74□□□□□ -1.97
NECTIN4Q96NY8 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC2.74□□□□□ -1.97
NECTIN4Q96NY8 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC2.74□□□□□ -1.97
NECTIN4Q96NY8 MIR3605-201ENST00000583214 100 ntBASIC2.74□□□□□ -1.97
NECTIN4Q96NY8 AC008521.1-201ENST00000587471 187 ntBASIC2.74□□□□□ -1.97
NECTIN4Q96NY8 AC012507.3-201ENST00000603556 477 ntBASIC2.74□□□□□ -1.97
NECTIN4Q96NY8 AC011155.2-201ENST00000623202 216 ntBASIC2.74□□□□□ -1.97
NECTIN4Q96NY8 AC139792.3-201ENST00000623525 224 ntBASIC2.74□□□□□ -1.97
NECTIN4Q96NY8 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.74□□□□□ -1.97
NECTIN4Q96NY8 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.74□□□□□ -1.97
NECTIN4Q96NY8 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.74□□□□□ -1.97
NECTIN4Q96NY8 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
NECTIN4Q96NY8 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC2.73□□□□□ -1.97
NECTIN4Q96NY8 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
NECTIN4Q96NY8 UBE2L2-201ENST00000254302 429 ntBASIC2.73□□□□□ -1.97
NECTIN4Q96NY8 SNORD115-7-201ENST00000365306 82 ntBASIC2.73□□□□□ -1.97
NECTIN4Q96NY8 RNU6-780P-201ENST00000391030 104 ntBASIC2.73□□□□□ -1.97
NECTIN4Q96NY8 RNU2-9P-201ENST00000410194 145 ntBASIC2.73□□□□□ -1.97
NECTIN4Q96NY8 FCF1P9-201ENST00000412546 282 ntBASIC2.73□□□□□ -1.97
NECTIN4Q96NY8 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC2.73□□□□□ -1.97
NECTIN4Q96NY8 AC092809.3-201ENST00000415453 231 ntBASIC2.73□□□□□ -1.97
NECTIN4Q96NY8 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC2.73□□□□□ -1.97
NECTIN4Q96NY8 MTCYBP5-201ENST00000423752 1135 ntBASIC2.73□□□□□ -1.97
NECTIN4Q96NY8 RPL7P37-201ENST00000425095 738 ntBASIC2.73□□□□□ -1.97
NECTIN4Q96NY8 AL356320.1-201ENST00000429616 163 ntBASIC2.73□□□□□ -1.97
NECTIN4Q96NY8 FABP5P15-201ENST00000453566 214 ntBASIC2.73□□□□□ -1.97
NECTIN4Q96NY8 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC2.73□□□□□ -1.97
NECTIN4Q96NY8 RPL26P9-201ENST00000457466 433 ntBASIC2.73□□□□□ -1.97
NECTIN4Q96NY8 snoU13.23-201ENST00000458863 104 ntBASIC2.73□□□□□ -1.97
NECTIN4Q96NY8 RPL21P41-201ENST00000459863 264 ntBASIC2.73□□□□□ -1.97
NECTIN4Q96NY8 RPL37P6-201ENST00000460682 294 ntBASIC2.73□□□□□ -1.97
NECTIN4Q96NY8 AC003982.1-202ENST00000469928 248 ntBASIC2.73□□□□□ -1.97
NECTIN4Q96NY8 AC108078.2-201ENST00000510750 236 ntBASIC2.73□□□□□ -1.97
NECTIN4Q96NY8 RNU6-685P-201ENST00000517088 95 ntBASIC2.73□□□□□ -1.97
NECTIN4Q96NY8 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC2.73□□□□□ -1.97
NECTIN4Q96NY8 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.73□□□□□ -1.97
NECTIN4Q96NY8 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC2.73□□□□□ -1.97
NECTIN4Q96NY8 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC2.73□□□□□ -1.97
NECTIN4Q96NY8 HMGB1P33-201ENST00000563485 527 ntBASIC2.73□□□□□ -1.97
NECTIN4Q96NY8 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC2.73□□□□□ -1.97
NECTIN4Q96NY8 MIR4648-201ENST00000580107 72 ntBASIC2.73□□□□□ -1.97
NECTIN4Q96NY8 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.73□□□□□ -1.97
NECTIN4Q96NY8 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC2.73□□□□□ -1.97
NECTIN4Q96NY8 AC007938.3-201ENST00000604965 623 ntBASIC2.73□□□□□ -1.97
NECTIN4Q96NY8 AP001596.2-201ENST00000608410 312 ntBASIC2.73□□□□□ -1.97
NECTIN4Q96NY8 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC2.73□□□□□ -1.97
NECTIN4Q96NY8 ATM-228ENST00000639240 498 ntTSL 5 BASIC2.73□□□□□ -1.97
NECTIN4Q96NY8 ATM-230ENST00000640388 578 ntTSL 5 BASIC2.73□□□□□ -1.97
NECTIN4Q96NY8 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.73□□□□□ -1.97
NECTIN4Q96NY8 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
NECTIN4Q96NY8 ZBTB8OSP1-201ENST00000342688 498 ntBASIC2.72□□□□□ -1.97
NECTIN4Q96NY8 RNU6-179P-201ENST00000363350 107 ntBASIC2.72□□□□□ -1.97
NECTIN4Q96NY8 Y_RNA.372-201ENST00000365599 102 ntBASIC2.72□□□□□ -1.97
NECTIN4Q96NY8 Y_RNA.481-201ENST00000384373 102 ntBASIC2.72□□□□□ -1.97
NECTIN4Q96NY8 Y_RNA.576-201ENST00000384781 102 ntBASIC2.72□□□□□ -1.97
NECTIN4Q96NY8 RPL21P75-201ENST00000396599 483 ntBASIC2.72□□□□□ -1.97
NECTIN4Q96NY8 RPL21P28-201ENST00000401418 483 ntBASIC2.72□□□□□ -1.97
NECTIN4Q96NY8 AL592114.1-201ENST00000403842 483 ntBASIC2.72□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 119.2 ms