Protein–RNA interactions for Protein: Q96K76

USP47, Ubiquitin carboxyl-terminal hydrolase 47, humanhuman

Predictions only

Length 1,375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP47Q96K76 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC2.08□□□□□ -2.08
USP47Q96K76 LARP1BP3-201ENST00000437229 869 ntBASIC2.08□□□□□ -2.08
USP47Q96K76 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC2.08□□□□□ -2.08
USP47Q96K76 MTND4P25-201ENST00000441039 533 ntBASIC2.08□□□□□ -2.08
USP47Q96K76 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC2.08□□□□□ -2.08
USP47Q96K76 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC2.08□□□□□ -2.08
USP47Q96K76 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC2.08□□□□□ -2.08
USP47Q96K76 AC108059.3-201ENST00000456388 214 ntBASIC2.08□□□□□ -2.08
USP47Q96K76 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC2.08□□□□□ -2.08
USP47Q96K76 RPL23AP41-201ENST00000484754 458 ntBASIC2.08□□□□□ -2.08
USP47Q96K76 SNORA31.24-201ENST00000517232 57 ntBASIC2.08□□□□□ -2.08
USP47Q96K76 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC2.08□□□□□ -2.08
USP47Q96K76 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC2.08□□□□□ -2.08
USP47Q96K76 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC2.08□□□□□ -2.08
USP47Q96K76 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC2.08□□□□□ -2.08
USP47Q96K76 AL450336.1-201ENST00000605180 586 ntBASIC2.08□□□□□ -2.08
USP47Q96K76 AC091965.4-201ENST00000607691 587 ntBASIC2.08□□□□□ -2.08
USP47Q96K76 uc_338.14-201ENST00000613162 166 ntBASIC2.08□□□□□ -2.08
USP47Q96K76 AC245884.12-201ENST00000615364 59 ntBASIC2.08□□□□□ -2.08
USP47Q96K76 U6.99-201ENST00000637524 83 ntBASIC2.08□□□□□ -2.08
USP47Q96K76 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC2.08□□□□□ -2.08
USP47Q96K76 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC2.07□□□□□ -2.08
USP47Q96K76 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
USP47Q96K76 ZNF736P9Y-201ENST00000439586 1345 ntBASIC2.07□□□□□ -2.08
USP47Q96K76 SNORA3A-201ENST00000364113 130 ntBASIC2.07□□□□□ -2.08
USP47Q96K76 MIR524-201ENST00000385242 87 ntBASIC2.07□□□□□ -2.08
USP47Q96K76 RNU4-72P-201ENST00000410754 173 ntBASIC2.07□□□□□ -2.08
USP47Q96K76 ZNF90P2-204ENST00000419323 1075 ntBASIC2.07□□□□□ -2.08
USP47Q96K76 MTCO2P21-201ENST00000419780 677 ntBASIC2.07□□□□□ -2.08
USP47Q96K76 AL354692.1-201ENST00000423044 315 ntBASIC2.07□□□□□ -2.08
USP47Q96K76 AC084290.1-201ENST00000434995 374 ntBASIC2.07□□□□□ -2.08
USP47Q96K76 AC004383.1-201ENST00000438135 289 ntBASIC2.07□□□□□ -2.08
USP47Q96K76 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC2.07□□□□□ -2.08
USP47Q96K76 MTND2P39-201ENST00000457230 764 ntBASIC2.07□□□□□ -2.08
USP47Q96K76 AC080013.2-201ENST00000460866 323 ntBASIC2.07□□□□□ -2.08
USP47Q96K76 KLF3P2-201ENST00000465138 268 ntBASIC2.07□□□□□ -2.08
USP47Q96K76 AC104685.1-201ENST00000502445 371 ntBASIC2.07□□□□□ -2.08
USP47Q96K76 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC2.07□□□□□ -2.08
USP47Q96K76 UBE2V1P12-201ENST00000503954 474 ntBASIC2.07□□□□□ -2.08
USP47Q96K76 MTND3P3-201ENST00000505004 126 ntBASIC2.07□□□□□ -2.08
USP47Q96K76 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
USP47Q96K76 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC2.07□□□□□ -2.08
USP47Q96K76 AC068587.4-201ENST00000533893 186 ntBASIC2.07□□□□□ -2.08
USP47Q96K76 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC2.07□□□□□ -2.08
USP47Q96K76 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC2.07□□□□□ -2.08
USP47Q96K76 AL161670.1-201ENST00000554348 137 ntBASIC2.07□□□□□ -2.08
USP47Q96K76 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC2.07□□□□□ -2.08
USP47Q96K76 ROCK1P1-201ENST00000573767 549 ntBASIC2.07□□□□□ -2.08
USP47Q96K76 MIR4421-201ENST00000578133 69 ntBASIC2.07□□□□□ -2.08
USP47Q96K76 AC010928.2-201ENST00000588017 287 ntBASIC2.07□□□□□ -2.08
USP47Q96K76 RPS15AP11-201ENST00000594193 385 ntBASIC2.07□□□□□ -2.08
USP47Q96K76 AC098657.3-201ENST00000620434 263 ntBASIC2.07□□□□□ -2.08
USP47Q96K76 AC025048.6-202ENST00000627667 438 ntBASIC2.07□□□□□ -2.08
USP47Q96K76 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC2.07□□□□□ -2.08
USP47Q96K76 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC2.07□□□□□ -2.08
USP47Q96K76 AL359854.1-201ENST00000614203 1594 ntBASIC2.06□□□□□ -2.08
USP47Q96K76 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
USP47Q96K76 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC2.06□□□□□ -2.08
USP47Q96K76 RNU6-288P-201ENST00000363690 104 ntBASIC2.06□□□□□ -2.08
USP47Q96K76 SNORA6-201ENST00000384033 151 ntBASIC2.06□□□□□ -2.08
USP47Q96K76 MIR1304-201ENST00000408243 91 ntBASIC2.06□□□□□ -2.08
USP47Q96K76 U6atac.2-201ENST00000408644 118 ntBASIC2.06□□□□□ -2.08
USP47Q96K76 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC2.06□□□□□ -2.08
USP47Q96K76 AL513185.2-201ENST00000425543 193 ntBASIC2.06□□□□□ -2.08
USP47Q96K76 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC2.06□□□□□ -2.08
USP47Q96K76 TIMM9P1-201ENST00000436122 256 ntBASIC2.06□□□□□ -2.08
USP47Q96K76 IPO7P1-201ENST00000442031 636 ntBASIC2.06□□□□□ -2.08
USP47Q96K76 NEFMP1-201ENST00000443423 1006 ntBASIC2.06□□□□□ -2.08
USP47Q96K76 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC2.06□□□□□ -2.08
USP47Q96K76 AP001324.2-201ENST00000461163 319 ntBASIC2.06□□□□□ -2.08
USP47Q96K76 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC2.06□□□□□ -2.08
USP47Q96K76 BZW1P2-201ENST00000473537 826 ntBASIC2.06□□□□□ -2.08
USP47Q96K76 AC026801.1-201ENST00000497178 464 ntBASIC2.06□□□□□ -2.08
USP47Q96K76 RNU6-143P-201ENST00000516942 93 ntBASIC2.06□□□□□ -2.08
USP47Q96K76 RNU6-1183P-201ENST00000517054 60 ntBASIC2.06□□□□□ -2.08
USP47Q96K76 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC2.06□□□□□ -2.08
USP47Q96K76 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC2.06□□□□□ -2.08
USP47Q96K76 NDUFA5P6-201ENST00000542110 379 ntBASIC2.06□□□□□ -2.08
USP47Q96K76 ARL2BPP2-201ENST00000550907 489 ntBASIC2.06□□□□□ -2.08
USP47Q96K76 SNORA4-201ENST00000584302 138 ntBASIC2.06□□□□□ -2.08
USP47Q96K76 MTCO2P2-201ENST00000591258 225 ntBASIC2.06□□□□□ -2.08
USP47Q96K76 WISP1-OT1-201ENST00000602893 642 ntBASIC2.06□□□□□ -2.08
USP47Q96K76 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
USP47Q96K76 AC009974.1-201ENST00000608881 455 ntBASIC2.06□□□□□ -2.08
USP47Q96K76 AL391834.2-201ENST00000609982 546 ntBASIC2.06□□□□□ -2.08
USP47Q96K76 RMST_6.1-201ENST00000611980 203 ntBASIC2.06□□□□□ -2.08
USP47Q96K76 AC090970.3-201ENST00000612566 866 ntBASIC2.06□□□□□ -2.08
USP47Q96K76 AL139418.1-201ENST00000613613 177 ntBASIC2.06□□□□□ -2.08
USP47Q96K76 AL109620.1-201ENST00000618738 1197 ntBASIC2.06□□□□□ -2.08
USP47Q96K76 AC013470.4-201ENST00000619978 986 ntBASIC2.06□□□□□ -2.08
USP47Q96K76 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC2.06□□□□□ -2.08
USP47Q96K76 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC2.05□□□□□ -2.08
USP47Q96K76 RNU6-188P-201ENST00000364207 107 ntBASIC2.05□□□□□ -2.08
USP47Q96K76 RNU6-157P-201ENST00000383957 107 ntBASIC2.05□□□□□ -2.08
USP47Q96K76 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC2.05□□□□□ -2.08
USP47Q96K76 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.05□□□□□ -2.08
USP47Q96K76 RPS3AP44-201ENST00000425466 790 ntBASIC2.05□□□□□ -2.08
USP47Q96K76 PTGES3P4-201ENST00000426243 356 ntBASIC2.05□□□□□ -2.08
USP47Q96K76 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC2.05□□□□□ -2.08
USP47Q96K76 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC2.05□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 120.8 ms