Protein–RNA interactions for Protein: Q96JM3

CHAMP1, Chromosome alignment-maintaining phosphoprotein 1, humanhuman

Predictions only

Length 812 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1Q96JM3 RNU6-1256P-201ENST00000516539 103 ntBASIC4.17□□□□□ -1.74
CHAMP1Q96JM3 AC026403.1-201ENST00000518938 295 ntBASIC4.17□□□□□ -1.74
CHAMP1Q96JM3 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC4.17□□□□□ -1.74
CHAMP1Q96JM3 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC4.17□□□□□ -1.74
CHAMP1Q96JM3 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC4.17□□□□□ -1.74
CHAMP1Q96JM3 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC4.17□□□□□ -1.74
CHAMP1Q96JM3 AC104695.3-201ENST00000604052 296 ntBASIC4.17□□□□□ -1.74
CHAMP1Q96JM3 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC4.17□□□□□ -1.74
CHAMP1Q96JM3 AC068647.1-201ENST00000489539 2265 ntBASIC4.17□□□□□ -1.74
CHAMP1Q96JM3 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC4.17□□□□□ -1.74
CHAMP1Q96JM3 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
CHAMP1Q96JM3 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC4.16□□□□□ -1.74
CHAMP1Q96JM3 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
CHAMP1Q96JM3 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC4.16□□□□□ -1.74
CHAMP1Q96JM3 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC4.16□□□□□ -1.74
CHAMP1Q96JM3 Y_RNA.33-201ENST00000362591 102 ntBASIC4.16□□□□□ -1.74
CHAMP1Q96JM3 Y_RNA.80-201ENST00000362996 102 ntBASIC4.16□□□□□ -1.74
CHAMP1Q96JM3 RNU6-596P-201ENST00000365395 98 ntBASIC4.16□□□□□ -1.74
CHAMP1Q96JM3 RNU6-395P-201ENST00000365662 106 ntBASIC4.16□□□□□ -1.74
CHAMP1Q96JM3 AL445529.1-201ENST00000398713 389 ntBASIC4.16□□□□□ -1.74
CHAMP1Q96JM3 RNU6-174P-201ENST00000410406 106 ntBASIC4.16□□□□□ -1.74
CHAMP1Q96JM3 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
CHAMP1Q96JM3 AL158156.1-201ENST00000422509 473 ntBASIC4.16□□□□□ -1.74
CHAMP1Q96JM3 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC4.16□□□□□ -1.74
CHAMP1Q96JM3 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC4.16□□□□□ -1.74
CHAMP1Q96JM3 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC4.16□□□□□ -1.74
CHAMP1Q96JM3 RPL23AP31-201ENST00000456160 467 ntBASIC4.16□□□□□ -1.74
CHAMP1Q96JM3 HMGB1P30-201ENST00000492455 606 ntBASIC4.16□□□□□ -1.74
CHAMP1Q96JM3 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC4.16□□□□□ -1.74
CHAMP1Q96JM3 AC116655.1-201ENST00000508324 901 ntBASIC4.16□□□□□ -1.74
CHAMP1Q96JM3 HMGN1P11-201ENST00000508668 303 ntBASIC4.16□□□□□ -1.74
CHAMP1Q96JM3 AC113155.1-201ENST00000511141 769 ntBASIC4.16□□□□□ -1.74
CHAMP1Q96JM3 MIR892C-201ENST00000516410 77 ntBASIC4.16□□□□□ -1.74
CHAMP1Q96JM3 RNU6-143P-201ENST00000516942 93 ntBASIC4.16□□□□□ -1.74
CHAMP1Q96JM3 AC005899.2-201ENST00000584353 90 ntBASIC4.16□□□□□ -1.74
CHAMP1Q96JM3 AC006077.1-201ENST00000604746 343 ntBASIC4.16□□□□□ -1.74
CHAMP1Q96JM3 RNVU1-4-201ENST00000612985 164 ntBASIC4.16□□□□□ -1.74
CHAMP1Q96JM3 AC022149.2-201ENST00000621061 203 ntBASIC4.16□□□□□ -1.74
CHAMP1Q96JM3 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC4.16□□□□□ -1.74
CHAMP1Q96JM3 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
CHAMP1Q96JM3 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
CHAMP1Q96JM3 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC4.16□□□□□ -1.74
CHAMP1Q96JM3 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC4.16□□□□□ -1.74
CHAMP1Q96JM3 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
CHAMP1Q96JM3 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
CHAMP1Q96JM3 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC4.16□□□□□ -1.74
CHAMP1Q96JM3 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
CHAMP1Q96JM3 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
CHAMP1Q96JM3 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC4.15□□□□□ -1.74
CHAMP1Q96JM3 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4.15□□□□□ -1.74
CHAMP1Q96JM3 OTUD4P1-201ENST00000237841 3067 ntBASIC4.15□□□□□ -1.75
CHAMP1Q96JM3 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC4.15□□□□□ -1.75
CHAMP1Q96JM3 Y_RNA.557-201ENST00000384680 107 ntBASIC4.15□□□□□ -1.75
CHAMP1Q96JM3 HIST1H2APS3-201ENST00000403259 134 ntBASIC4.15□□□□□ -1.75
CHAMP1Q96JM3 MTHFD2P2-201ENST00000407725 247 ntBASIC4.15□□□□□ -1.75
CHAMP1Q96JM3 HNRNPDLP1-201ENST00000412834 550 ntBASIC4.15□□□□□ -1.75
CHAMP1Q96JM3 MRPS18CP6-201ENST00000423587 223 ntBASIC4.15□□□□□ -1.75
CHAMP1Q96JM3 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC4.15□□□□□ -1.75
CHAMP1Q96JM3 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC4.15□□□□□ -1.75
CHAMP1Q96JM3 AC011816.1-201ENST00000441346 546 ntBASIC4.15□□□□□ -1.75
CHAMP1Q96JM3 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC4.15□□□□□ -1.75
CHAMP1Q96JM3 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC4.15□□□□□ -1.75
CHAMP1Q96JM3 PCMTD1P1-201ENST00000455560 355 ntBASIC4.15□□□□□ -1.75
CHAMP1Q96JM3 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC4.15□□□□□ -1.75
CHAMP1Q96JM3 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC4.15□□□□□ -1.75
CHAMP1Q96JM3 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
CHAMP1Q96JM3 SNORA31.8-201ENST00000516327 108 ntBASIC4.15□□□□□ -1.75
CHAMP1Q96JM3 SNORA70.16-201ENST00000516390 95 ntBASIC4.15□□□□□ -1.75
CHAMP1Q96JM3 IGKV2D-23-201ENST00000518179 286 ntBASIC4.15□□□□□ -1.75
CHAMP1Q96JM3 AC023442.1-201ENST00000531247 422 ntBASIC4.15□□□□□ -1.75
CHAMP1Q96JM3 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC4.15□□□□□ -1.75
CHAMP1Q96JM3 SUB1P3-201ENST00000564581 315 ntBASIC4.15□□□□□ -1.75
CHAMP1Q96JM3 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC4.15□□□□□ -1.75
CHAMP1Q96JM3 CPDP1-201ENST00000579660 283 ntBASIC4.15□□□□□ -1.75
CHAMP1Q96JM3 AL591516.1-201ENST00000611326 274 ntBASIC4.15□□□□□ -1.75
CHAMP1Q96JM3 AL354798.1-201ENST00000622505 329 ntBASIC4.15□□□□□ -1.75
CHAMP1Q96JM3 MPP6-209ENST00000625307 126 ntTSL 5 BASIC4.15□□□□□ -1.75
CHAMP1Q96JM3 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC4.15□□□□□ -1.75
CHAMP1Q96JM3 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC4.15□□□□□ -1.75
CHAMP1Q96JM3 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC4.15□□□□□ -1.75
CHAMP1Q96JM3 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC4.15□□□□□ -1.75
CHAMP1Q96JM3 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.75
CHAMP1Q96JM3 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
CHAMP1Q96JM3 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC4.15□□□□□ -1.75
CHAMP1Q96JM3 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC4.15□□□□□ -1.75
CHAMP1Q96JM3 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
CHAMP1Q96JM3 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
CHAMP1Q96JM3 Y_RNA.153-201ENST00000363615 91 ntBASIC4.14□□□□□ -1.75
CHAMP1Q96JM3 U3.15-201ENST00000365398 212 ntBASIC4.14□□□□□ -1.75
CHAMP1Q96JM3 Y_RNA.428-201ENST00000384078 102 ntBASIC4.14□□□□□ -1.75
CHAMP1Q96JM3 Y_RNA.452-201ENST00000384202 108 ntBASIC4.14□□□□□ -1.75
CHAMP1Q96JM3 RNU6-1025P-201ENST00000410629 104 ntBASIC4.14□□□□□ -1.75
CHAMP1Q96JM3 RPS29P4-201ENST00000414733 161 ntBASIC4.14□□□□□ -1.75
CHAMP1Q96JM3 EI24P1-201ENST00000416584 867 ntBASIC4.14□□□□□ -1.75
CHAMP1Q96JM3 AC128713.1-201ENST00000471495 306 ntBASIC4.14□□□□□ -1.75
CHAMP1Q96JM3 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC4.14□□□□□ -1.75
CHAMP1Q96JM3 AL359273.1-201ENST00000510918 627 ntBASIC4.14□□□□□ -1.75
CHAMP1Q96JM3 SNORD116.3-201ENST00000517176 78 ntBASIC4.14□□□□□ -1.75
CHAMP1Q96JM3 AC026333.2-201ENST00000542164 106 ntBASIC4.14□□□□□ -1.75
CHAMP1Q96JM3 TRAV32-201ENST00000553993 340 ntBASIC4.14□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms