Protein–RNA interactions for Protein: Q96DI7

SNRNP40, U5 small nuclear ribonucleoprotein 40 kDa protein, humanhuman

Known RBP Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40Q96DI7 AC090582.1-201ENST00000636321 199 ntBASIC2.49□□□□□ -2.01
SNRNP40Q96DI7 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC2.49□□□□□ -2.01
SNRNP40Q96DI7 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC2.49□□□□□ -2.01
SNRNP40Q96DI7 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC2.48□□□□□ -2.01
SNRNP40Q96DI7 Z75746.1-201ENST00000440243 2080 ntBASIC2.48□□□□□ -2.01
SNRNP40Q96DI7 SNORD115-7-201ENST00000365306 82 ntBASIC2.48□□□□□ -2.01
SNRNP40Q96DI7 SNORA75B-201ENST00000384053 137 ntBASIC2.48□□□□□ -2.01
SNRNP40Q96DI7 SNORA67.4-201ENST00000384688 142 ntBASIC2.48□□□□□ -2.01
SNRNP40Q96DI7 MIR518D-201ENST00000385014 87 ntBASIC2.48□□□□□ -2.01
SNRNP40Q96DI7 RNU6-220P-201ENST00000390919 107 ntBASIC2.48□□□□□ -2.01
SNRNP40Q96DI7 FGFR1OP2P1-201ENST00000395943 500 ntBASIC2.48□□□□□ -2.01
SNRNP40Q96DI7 AL133475.1-201ENST00000404414 305 ntBASIC2.48□□□□□ -2.01
SNRNP40Q96DI7 OFD1P1Y-201ENST00000411756 1225 ntBASIC2.48□□□□□ -2.01
SNRNP40Q96DI7 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC2.48□□□□□ -2.01
SNRNP40Q96DI7 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC2.48□□□□□ -2.01
SNRNP40Q96DI7 RPL21P90-201ENST00000415692 466 ntBASIC2.48□□□□□ -2.01
SNRNP40Q96DI7 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC2.48□□□□□ -2.01
SNRNP40Q96DI7 RPL23AP20-201ENST00000447965 421 ntBASIC2.48□□□□□ -2.01
SNRNP40Q96DI7 AL122001.1-201ENST00000457027 370 ntBASIC2.48□□□□□ -2.01
SNRNP40Q96DI7 AC006026.2-201ENST00000457376 180 ntBASIC2.48□□□□□ -2.01
SNRNP40Q96DI7 RNU7-182P-201ENST00000459009 62 ntBASIC2.48□□□□□ -2.01
SNRNP40Q96DI7 KLF3P2-201ENST00000465138 268 ntBASIC2.48□□□□□ -2.01
SNRNP40Q96DI7 MRPL42P6-201ENST00000486397 371 ntBASIC2.48□□□□□ -2.01
SNRNP40Q96DI7 CKS1BP2-201ENST00000497342 240 ntBASIC2.48□□□□□ -2.01
SNRNP40Q96DI7 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC2.48□□□□□ -2.01
SNRNP40Q96DI7 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC2.48□□□□□ -2.01
SNRNP40Q96DI7 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC2.48□□□□□ -2.01
SNRNP40Q96DI7 AC008716.1-201ENST00000511084 513 ntBASIC2.48□□□□□ -2.01
SNRNP40Q96DI7 MTCO3P28-201ENST00000513351 515 ntBASIC2.48□□□□□ -2.01
SNRNP40Q96DI7 RNA5SP24-201ENST00000516478 95 ntBASIC2.48□□□□□ -2.01
SNRNP40Q96DI7 AP002963.1-201ENST00000530590 184 ntBASIC2.48□□□□□ -2.01
SNRNP40Q96DI7 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC2.48□□□□□ -2.01
SNRNP40Q96DI7 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC2.48□□□□□ -2.01
SNRNP40Q96DI7 AC023824.2-201ENST00000566185 400 ntBASIC2.48□□□□□ -2.01
SNRNP40Q96DI7 AC025678.1-201ENST00000567861 338 ntBASIC2.48□□□□□ -2.01
SNRNP40Q96DI7 MIR3913-1-201ENST00000577744 102 ntBASIC2.48□□□□□ -2.01
SNRNP40Q96DI7 AC105245.1-201ENST00000581934 244 ntBASIC2.48□□□□□ -2.01
SNRNP40Q96DI7 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.48□□□□□ -2.01
SNRNP40Q96DI7 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC2.48□□□□□ -2.01
SNRNP40Q96DI7 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
SNRNP40Q96DI7 AC108206.1-201ENST00000570186 4159 ntBASIC2.47□□□□□ -2.01
SNRNP40Q96DI7 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
SNRNP40Q96DI7 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
SNRNP40Q96DI7 Y_RNA.51-201ENST00000362725 102 ntBASIC2.47□□□□□ -2.01
SNRNP40Q96DI7 SNORD3E-201ENST00000362899 217 ntBASIC2.47□□□□□ -2.01
SNRNP40Q96DI7 RNU4-40P-201ENST00000364351 143 ntBASIC2.47□□□□□ -2.01
SNRNP40Q96DI7 MIR578-201ENST00000384828 96 ntBASIC2.47□□□□□ -2.01
SNRNP40Q96DI7 MIR1-2-201ENST00000384961 85 ntBASIC2.47□□□□□ -2.01
SNRNP40Q96DI7 MIR454-201ENST00000390180 115 ntBASIC2.47□□□□□ -2.01
SNRNP40Q96DI7 FTH1P15-201ENST00000406984 280 ntBASIC2.47□□□□□ -2.01
SNRNP40Q96DI7 OR6C66P-201ENST00000414917 930 ntBASIC2.47□□□□□ -2.01
SNRNP40Q96DI7 AC138623.1-201ENST00000418060 216 ntBASIC2.47□□□□□ -2.01
SNRNP40Q96DI7 AC097463.2-201ENST00000421074 142 ntBASIC2.47□□□□□ -2.01
SNRNP40Q96DI7 MTCO2P34-201ENST00000421994 607 ntBASIC2.47□□□□□ -2.01
SNRNP40Q96DI7 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.47□□□□□ -2.01
SNRNP40Q96DI7 ACTR3BP6-201ENST00000422332 1241 ntBASIC2.47□□□□□ -2.01
SNRNP40Q96DI7 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.47□□□□□ -2.01
SNRNP40Q96DI7 RPL30P4-201ENST00000429309 333 ntBASIC2.47□□□□□ -2.01
SNRNP40Q96DI7 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC2.47□□□□□ -2.01
SNRNP40Q96DI7 MTCO3P5-201ENST00000433620 714 ntBASIC2.47□□□□□ -2.01
SNRNP40Q96DI7 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.47□□□□□ -2.01
SNRNP40Q96DI7 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC2.47□□□□□ -2.01
SNRNP40Q96DI7 HIGD1AP2-201ENST00000446367 280 ntBASIC2.47□□□□□ -2.01
SNRNP40Q96DI7 RPL7P12-201ENST00000446719 750 ntBASIC2.47□□□□□ -2.01
SNRNP40Q96DI7 NDUFB1P2-201ENST00000449477 176 ntBASIC2.47□□□□□ -2.01
SNRNP40Q96DI7 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC2.47□□□□□ -2.01
SNRNP40Q96DI7 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC2.47□□□□□ -2.01
SNRNP40Q96DI7 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC2.47□□□□□ -2.01
SNRNP40Q96DI7 AC112771.1-201ENST00000463581 102 ntBASIC2.47□□□□□ -2.01
SNRNP40Q96DI7 UBL5P3-201ENST00000475112 231 ntBASIC2.47□□□□□ -2.01
SNRNP40Q96DI7 AC011005.2-201ENST00000487324 359 ntBASIC2.47□□□□□ -2.01
SNRNP40Q96DI7 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC2.47□□□□□ -2.01
SNRNP40Q96DI7 AC079140.3-201ENST00000511111 550 ntBASIC2.47□□□□□ -2.01
SNRNP40Q96DI7 RNA5SP503-201ENST00000517047 117 ntBASIC2.47□□□□□ -2.01
SNRNP40Q96DI7 RNU6-685P-201ENST00000517088 95 ntBASIC2.47□□□□□ -2.01
SNRNP40Q96DI7 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC2.47□□□□□ -2.01
SNRNP40Q96DI7 AP004607.1-201ENST00000524456 203 ntBASIC2.47□□□□□ -2.01
SNRNP40Q96DI7 HPRT1P3-201ENST00000539521 576 ntBASIC2.47□□□□□ -2.01
SNRNP40Q96DI7 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC2.47□□□□□ -2.01
SNRNP40Q96DI7 NDUFAF4P1-201ENST00000559425 519 ntBASIC2.47□□□□□ -2.01
SNRNP40Q96DI7 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC2.47□□□□□ -2.01
SNRNP40Q96DI7 AL391840.1-201ENST00000571144 367 ntBASIC2.47□□□□□ -2.01
SNRNP40Q96DI7 RN7SKP299-201ENST00000606679 301 ntBASIC2.47□□□□□ -2.01
SNRNP40Q96DI7 AC096772.1-201ENST00000609146 564 ntBASIC2.47□□□□□ -2.01
SNRNP40Q96DI7 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.47□□□□□ -2.01
SNRNP40Q96DI7 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.47□□□□□ -2.01
SNRNP40Q96DI7 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.47□□□□□ -2.01
SNRNP40Q96DI7 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
SNRNP40Q96DI7 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
SNRNP40Q96DI7 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.47□□□□□ -2.01
SNRNP40Q96DI7 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC2.47□□□□□ -2.01
SNRNP40Q96DI7 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
SNRNP40Q96DI7 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.01
SNRNP40Q96DI7 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.46□□□□□ -2.01
SNRNP40Q96DI7 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC2.46□□□□□ -2.01
SNRNP40Q96DI7 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.46□□□□□ -2.02
SNRNP40Q96DI7 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
SNRNP40Q96DI7 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
SNRNP40Q96DI7 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.46□□□□□ -2.02
SNRNP40Q96DI7 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.46□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 116.8 ms