Protein–RNA interactions for Protein: Q95604

HLA-C, HLA class I histocompatibility antigen, Cw-17 alpha chain, humanhuman

Predictions only

Length 372 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-CQ95604 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC5.09□□□□□ -1.59
HLA-CQ95604 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC5.09□□□□□ -1.59
HLA-CQ95604 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
HLA-CQ95604 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC5.09□□□□□ -1.59
HLA-CQ95604 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC5.09□□□□□ -1.59
HLA-CQ95604 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC5.09□□□□□ -1.59
HLA-CQ95604 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC5.09□□□□□ -1.59
HLA-CQ95604 RNU6-763P-201ENST00000390865 106 ntBASIC5.09□□□□□ -1.59
HLA-CQ95604 MIR888-201ENST00000401186 77 ntBASIC5.09□□□□□ -1.59
HLA-CQ95604 RNU2-52P-201ENST00000410680 190 ntBASIC5.09□□□□□ -1.59
HLA-CQ95604 AC096649.2-201ENST00000416186 393 ntBASIC5.09□□□□□ -1.59
HLA-CQ95604 GNG5P5-201ENST00000420444 220 ntBASIC5.09□□□□□ -1.59
HLA-CQ95604 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC5.09□□□□□ -1.59
HLA-CQ95604 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC5.09□□□□□ -1.59
HLA-CQ95604 PTMAP3-201ENST00000447474 330 ntBASIC5.09□□□□□ -1.59
HLA-CQ95604 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC5.09□□□□□ -1.59
HLA-CQ95604 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC5.09□□□□□ -1.59
HLA-CQ95604 AC136628.3-201ENST00000521868 290 ntBASIC5.09□□□□□ -1.59
HLA-CQ95604 AC115990.1-201ENST00000526957 301 ntBASIC5.09□□□□□ -1.59
HLA-CQ95604 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC5.09□□□□□ -1.59
HLA-CQ95604 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
HLA-CQ95604 AC112693.2-201ENST00000556538 232 ntBASIC5.09□□□□□ -1.59
HLA-CQ95604 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC5.09□□□□□ -1.59
HLA-CQ95604 MIR5688-201ENST00000580619 83 ntBASIC5.09□□□□□ -1.59
HLA-CQ95604 AC013791.1-201ENST00000616619 62 ntBASIC5.09□□□□□ -1.59
HLA-CQ95604 AP005019.3-201ENST00000620418 560 ntBASIC5.09□□□□□ -1.59
HLA-CQ95604 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC5.09□□□□□ -1.59
HLA-CQ95604 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC5.09□□□□□ -1.59
HLA-CQ95604 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
HLA-CQ95604 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC5.09□□□□□ -1.6
HLA-CQ95604 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC5.08□□□□□ -1.6
HLA-CQ95604 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
HLA-CQ95604 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
HLA-CQ95604 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
HLA-CQ95604 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
HLA-CQ95604 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
HLA-CQ95604 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC5.08□□□□□ -1.6
HLA-CQ95604 RN7SKP280-201ENST00000364196 304 ntBASIC5.08□□□□□ -1.6
HLA-CQ95604 Y_RNA.329-201ENST00000365209 107 ntBASIC5.08□□□□□ -1.6
HLA-CQ95604 RNU6-1197P-201ENST00000391183 107 ntBASIC5.08□□□□□ -1.6
HLA-CQ95604 PTGES3P4-201ENST00000426243 356 ntBASIC5.08□□□□□ -1.6
HLA-CQ95604 SNORD108-201ENST00000459332 71 ntBASIC5.08□□□□□ -1.6
HLA-CQ95604 SNRPGP7-201ENST00000469016 106 ntBASIC5.08□□□□□ -1.6
HLA-CQ95604 AC091179.3-201ENST00000474761 144 ntBASIC5.08□□□□□ -1.6
HLA-CQ95604 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC5.08□□□□□ -1.6
HLA-CQ95604 Y_RNA.686-201ENST00000516548 134 ntBASIC5.08□□□□□ -1.6
HLA-CQ95604 RNA5SP392-201ENST00000516905 112 ntBASIC5.08□□□□□ -1.6
HLA-CQ95604 RNU2-12P-201ENST00000517216 168 ntBASIC5.08□□□□□ -1.6
HLA-CQ95604 MRPL49P2-201ENST00000521066 465 ntBASIC5.08□□□□□ -1.6
HLA-CQ95604 DEFB131C-201ENST00000528817 165 ntBASIC5.08□□□□□ -1.6
HLA-CQ95604 MIR3158-1-201ENST00000583596 81 ntBASIC5.08□□□□□ -1.6
HLA-CQ95604 AC069294.1-201ENST00000608397 350 ntBASIC5.08□□□□□ -1.6
HLA-CQ95604 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC5.08□□□□□ -1.6
HLA-CQ95604 AC000095.2-202ENST00000637415 154 ntBASIC5.08□□□□□ -1.6
HLA-CQ95604 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC5.08□□□□□ -1.6
HLA-CQ95604 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
HLA-CQ95604 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
HLA-CQ95604 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
HLA-CQ95604 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC5.08□□□□□ -1.6
HLA-CQ95604 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
HLA-CQ95604 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
HLA-CQ95604 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC5.07□□□□□ -1.6
HLA-CQ95604 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC5.07□□□□□ -1.6
HLA-CQ95604 AC083899.1-201ENST00000454465 3819 ntBASIC5.07□□□□□ -1.6
HLA-CQ95604 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
HLA-CQ95604 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
HLA-CQ95604 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC5.07□□□□□ -1.6
HLA-CQ95604 DLEU2_6.3-201ENST00000340052 136 ntBASIC5.07□□□□□ -1.6
HLA-CQ95604 Y_RNA.172-201ENST00000363765 102 ntBASIC5.07□□□□□ -1.6
HLA-CQ95604 SNORA62.3-201ENST00000365110 153 ntBASIC5.07□□□□□ -1.6
HLA-CQ95604 RNU6-1264P-201ENST00000383891 107 ntBASIC5.07□□□□□ -1.6
HLA-CQ95604 SNORA8.3-201ENST00000384679 139 ntBASIC5.07□□□□□ -1.6
HLA-CQ95604 PPIAP31-201ENST00000405422 495 ntBASIC5.07□□□□□ -1.6
HLA-CQ95604 RN7SKP17-201ENST00000411242 351 ntBASIC5.07□□□□□ -1.6
HLA-CQ95604 AC009238.2-201ENST00000431026 355 ntBASIC5.07□□□□□ -1.6
HLA-CQ95604 PHBP16-201ENST00000446318 950 ntBASIC5.07□□□□□ -1.6
HLA-CQ95604 HMGB3P8-201ENST00000449709 577 ntBASIC5.07□□□□□ -1.6
HLA-CQ95604 RNU6-1211P-201ENST00000459179 105 ntBASIC5.07□□□□□ -1.6
HLA-CQ95604 AC023632.4-201ENST00000517783 191 ntBASIC5.07□□□□□ -1.6
HLA-CQ95604 AP001781.1-201ENST00000530977 207 ntBASIC5.07□□□□□ -1.6
HLA-CQ95604 AC021269.2-201ENST00000532318 330 ntBASIC5.07□□□□□ -1.6
HLA-CQ95604 AC009163.5-201ENST00000575421 637 ntBASIC5.07□□□□□ -1.6
HLA-CQ95604 MIR4444-1-201ENST00000581696 74 ntBASIC5.07□□□□□ -1.6
HLA-CQ95604 MIR4444-2-201ENST00000584390 74 ntBASIC5.07□□□□□ -1.6
HLA-CQ95604 IPO5P1-202ENST00000600039 287 ntBASIC5.07□□□□□ -1.6
HLA-CQ95604 AC108738.1-201ENST00000603703 237 ntBASIC5.07□□□□□ -1.6
HLA-CQ95604 SNRPGP20-201ENST00000604477 205 ntBASIC5.07□□□□□ -1.6
HLA-CQ95604 AC091979.2-201ENST00000607514 214 ntBASIC5.07□□□□□ -1.6
HLA-CQ95604 AL445567.2-201ENST00000618935 498 ntBASIC5.07□□□□□ -1.6
HLA-CQ95604 DLEU2_6.2-201ENST00000620994 136 ntBASIC5.07□□□□□ -1.6
HLA-CQ95604 ALB-202ENST00000401494 1659 ntTSL 5 BASIC5.07□□□□□ -1.6
HLA-CQ95604 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
HLA-CQ95604 AL031595.2-201ENST00000624215 19071 ntBASIC5.07□□□□□ -1.6
HLA-CQ95604 KIF27-202ENST00000334204 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
HLA-CQ95604 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
HLA-CQ95604 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC5.07□□□□□ -1.6
HLA-CQ95604 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC5.07□□□□□ -1.6
HLA-CQ95604 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
HLA-CQ95604 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC5.07□□□□□ -1.6
HLA-CQ95604 AL022311.1-201ENST00000623726 19416 ntBASIC5.07□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 106 ms