Protein–RNA interactions for Protein: Q8TAD8

SNIP1, Smad nuclear-interacting protein 1, humanhuman

Known RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1Q8TAD8 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
SNIP1Q8TAD8 RN7SKP100-201ENST00000411258 284 ntBASIC4.86□□□□□ -1.63
SNIP1Q8TAD8 RPS20P14-201ENST00000412545 360 ntBASIC4.86□□□□□ -1.63
SNIP1Q8TAD8 AC074117.2-201ENST00000417130 397 ntBASIC4.86□□□□□ -1.63
SNIP1Q8TAD8 YPEL5P1-201ENST00000419731 367 ntBASIC4.86□□□□□ -1.63
SNIP1Q8TAD8 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC4.86□□□□□ -1.63
SNIP1Q8TAD8 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC4.86□□□□□ -1.63
SNIP1Q8TAD8 RN7SL817P-201ENST00000480777 288 ntBASIC4.86□□□□□ -1.63
SNIP1Q8TAD8 RNU4ATAC18P-201ENST00000516179 126 ntBASIC4.86□□□□□ -1.63
SNIP1Q8TAD8 MAL2-206ENST00000522187 547 ntTSL 4 BASIC4.86□□□□□ -1.63
SNIP1Q8TAD8 AP004607.1-201ENST00000524456 203 ntBASIC4.86□□□□□ -1.63
SNIP1Q8TAD8 AC005868.1-201ENST00000536421 331 ntBASIC4.86□□□□□ -1.63
SNIP1Q8TAD8 AL121603.1-201ENST00000553815 142 ntBASIC4.86□□□□□ -1.63
SNIP1Q8TAD8 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC4.86□□□□□ -1.63
SNIP1Q8TAD8 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC4.86□□□□□ -1.63
SNIP1Q8TAD8 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
SNIP1Q8TAD8 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC4.86□□□□□ -1.63
SNIP1Q8TAD8 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
SNIP1Q8TAD8 MAPK10-286ENST00000641208 8747 ntBASIC4.86□□□□□ -1.63
SNIP1Q8TAD8 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
SNIP1Q8TAD8 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC4.86□□□□□ -1.63
SNIP1Q8TAD8 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
SNIP1Q8TAD8 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC4.85□□□□□ -1.63
SNIP1Q8TAD8 PHKBP1-201ENST00000450951 1951 ntBASIC4.85□□□□□ -1.63
SNIP1Q8TAD8 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
SNIP1Q8TAD8 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
SNIP1Q8TAD8 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
SNIP1Q8TAD8 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC4.85□□□□□ -1.63
SNIP1Q8TAD8 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC4.85□□□□□ -1.63
SNIP1Q8TAD8 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC4.85□□□□□ -1.63
SNIP1Q8TAD8 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
SNIP1Q8TAD8 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
SNIP1Q8TAD8 RN7SKP145-201ENST00000363291 303 ntBASIC4.85□□□□□ -1.63
SNIP1Q8TAD8 RNA5SP90-201ENST00000364801 99 ntBASIC4.85□□□□□ -1.63
SNIP1Q8TAD8 SNORA66-201ENST00000384792 133 ntBASIC4.85□□□□□ -1.63
SNIP1Q8TAD8 MIR548A1-201ENST00000385041 97 ntBASIC4.85□□□□□ -1.63
SNIP1Q8TAD8 RNU2-68P-201ENST00000410878 191 ntBASIC4.85□□□□□ -1.63
SNIP1Q8TAD8 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
SNIP1Q8TAD8 AL451050.1-201ENST00000450126 415 ntBASIC4.85□□□□□ -1.63
SNIP1Q8TAD8 UQCRHP4-201ENST00000471686 272 ntBASIC4.85□□□□□ -1.63
SNIP1Q8TAD8 UBE2CP3-201ENST00000502715 450 ntBASIC4.85□□□□□ -1.63
SNIP1Q8TAD8 ENPP7P11-201ENST00000505915 627 ntBASIC4.85□□□□□ -1.63
SNIP1Q8TAD8 RNU6-513P-201ENST00000516104 104 ntBASIC4.85□□□□□ -1.63
SNIP1Q8TAD8 SCARNA15.2-201ENST00000516409 127 ntBASIC4.85□□□□□ -1.63
SNIP1Q8TAD8 RNU6-1256P-201ENST00000516539 103 ntBASIC4.85□□□□□ -1.63
SNIP1Q8TAD8 AC006199.1-201ENST00000548728 219 ntBASIC4.85□□□□□ -1.63
SNIP1Q8TAD8 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC4.85□□□□□ -1.63
SNIP1Q8TAD8 MIR6133-201ENST00000617057 108 ntBASIC4.85□□□□□ -1.63
SNIP1Q8TAD8 MESTIT1_1.1-201ENST00000618871 140 ntBASIC4.85□□□□□ -1.63
SNIP1Q8TAD8 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC4.85□□□□□ -1.63
SNIP1Q8TAD8 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
SNIP1Q8TAD8 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
SNIP1Q8TAD8 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC4.85□□□□□ -1.63
SNIP1Q8TAD8 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
SNIP1Q8TAD8 STX3-208ENST00000641815 3236 ntBASIC4.85□□□□□ -1.63
SNIP1Q8TAD8 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
SNIP1Q8TAD8 AC107027.3-201ENST00000565095 3473 ntBASIC4.85□□□□□ -1.63
SNIP1Q8TAD8 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC4.85□□□□□ -1.63
SNIP1Q8TAD8 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
SNIP1Q8TAD8 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC4.84□□□□□ -1.63
SNIP1Q8TAD8 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC4.84□□□□□ -1.63
SNIP1Q8TAD8 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
SNIP1Q8TAD8 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC4.84□□□□□ -1.63
SNIP1Q8TAD8 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC4.84□□□□□ -1.63
SNIP1Q8TAD8 Y_RNA.114-201ENST00000363265 113 ntBASIC4.84□□□□□ -1.63
SNIP1Q8TAD8 RNU6-727P-201ENST00000363592 107 ntBASIC4.84□□□□□ -1.63
SNIP1Q8TAD8 U3.9-201ENST00000363823 204 ntBASIC4.84□□□□□ -1.63
SNIP1Q8TAD8 SNORD58C-201ENST00000365223 64 ntBASIC4.84□□□□□ -1.63
SNIP1Q8TAD8 Y_RNA.348-201ENST00000365403 103 ntBASIC4.84□□□□□ -1.63
SNIP1Q8TAD8 Y_RNA.558-201ENST00000384685 113 ntBASIC4.84□□□□□ -1.63
SNIP1Q8TAD8 MIR23A-201ENST00000385245 73 ntBASIC4.84□□□□□ -1.63
SNIP1Q8TAD8 RPL21P17-201ENST00000397467 475 ntBASIC4.84□□□□□ -1.63
SNIP1Q8TAD8 MIR298-201ENST00000401212 88 ntBASIC4.84□□□□□ -1.63
SNIP1Q8TAD8 AL591473.1-201ENST00000464297 313 ntBASIC4.84□□□□□ -1.63
SNIP1Q8TAD8 AL132838.2-201ENST00000492041 314 ntBASIC4.84□□□□□ -1.63
SNIP1Q8TAD8 AC016632.1-201ENST00000503994 196 ntBASIC4.84□□□□□ -1.63
SNIP1Q8TAD8 RNA5SP43-201ENST00000516559 110 ntBASIC4.84□□□□□ -1.63
SNIP1Q8TAD8 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC4.84□□□□□ -1.63
SNIP1Q8TAD8 MIR1254-2-201ENST00000579553 63 ntBASIC4.84□□□□□ -1.63
SNIP1Q8TAD8 MIR7853-201ENST00000584820 132 ntBASIC4.84□□□□□ -1.63
SNIP1Q8TAD8 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC4.84□□□□□ -1.63
SNIP1Q8TAD8 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC4.84□□□□□ -1.63
SNIP1Q8TAD8 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.84□□□□□ -1.63
SNIP1Q8TAD8 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC4.84□□□□□ -1.63
SNIP1Q8TAD8 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
SNIP1Q8TAD8 AC005332.5-201ENST00000591222 2919 ntBASIC4.84□□□□□ -1.63
SNIP1Q8TAD8 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
SNIP1Q8TAD8 MAPK10-328ENST00000641553 4009 ntBASIC4.84□□□□□ -1.64
SNIP1Q8TAD8 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
SNIP1Q8TAD8 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC4.84□□□□□ -1.64
SNIP1Q8TAD8 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
SNIP1Q8TAD8 SCN1A-220ENST00000641603 12506 ntBASIC4.83□□□□□ -1.64
SNIP1Q8TAD8 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC4.83□□□□□ -1.64
SNIP1Q8TAD8 AC104964.3-201ENST00000606115 2860 ntBASIC4.83□□□□□ -1.64
SNIP1Q8TAD8 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
SNIP1Q8TAD8 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC4.83□□□□□ -1.64
SNIP1Q8TAD8 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
SNIP1Q8TAD8 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
SNIP1Q8TAD8 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
SNIP1Q8TAD8 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC4.83□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 121.5 ms