Protein–RNA interactions for Protein: Q8NDV3

SMC1B, Structural maintenance of chromosomes protein 1B, humanhuman

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1BQ8NDV3 AL512844.2-201ENST00000433990 593 ntBASIC4.06□□□□□ -1.76
SMC1BQ8NDV3 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC4.06□□□□□ -1.76
SMC1BQ8NDV3 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC4.06□□□□□ -1.76
SMC1BQ8NDV3 AL136097.1-201ENST00000456945 913 ntBASIC4.06□□□□□ -1.76
SMC1BQ8NDV3 Y_RNA.632-201ENST00000459189 102 ntBASIC4.06□□□□□ -1.76
SMC1BQ8NDV3 APOA2-205ENST00000468465 421 ntTSL 2 BASIC4.06□□□□□ -1.76
SMC1BQ8NDV3 RPS23P3-201ENST00000470993 430 ntBASIC4.06□□□□□ -1.76
SMC1BQ8NDV3 TRBV12-1-201ENST00000479785 344 ntBASIC4.06□□□□□ -1.76
SMC1BQ8NDV3 AC022493.1-201ENST00000492984 337 ntBASIC4.06□□□□□ -1.76
SMC1BQ8NDV3 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC4.06□□□□□ -1.76
SMC1BQ8NDV3 AC008526.1-201ENST00000509149 338 ntBASIC4.06□□□□□ -1.76
SMC1BQ8NDV3 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC4.06□□□□□ -1.76
SMC1BQ8NDV3 LIAS-206ENST00000513731 826 ntTSL 5 BASIC4.06□□□□□ -1.76
SMC1BQ8NDV3 RNU6-559P-201ENST00000516151 98 ntBASIC4.06□□□□□ -1.76
SMC1BQ8NDV3 SNORA25.17-201ENST00000517184 124 ntBASIC4.06□□□□□ -1.76
SMC1BQ8NDV3 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC4.06□□□□□ -1.76
SMC1BQ8NDV3 COPS8P3-201ENST00000526024 482 ntBASIC4.06□□□□□ -1.76
SMC1BQ8NDV3 MIR4524B-201ENST00000581569 115 ntBASIC4.06□□□□□ -1.76
SMC1BQ8NDV3 AL160413.1-201ENST00000622780 310 ntBASIC4.06□□□□□ -1.76
SMC1BQ8NDV3 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC4.06□□□□□ -1.76
SMC1BQ8NDV3 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC4.06□□□□□ -1.76
SMC1BQ8NDV3 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC4.06□□□□□ -1.76
SMC1BQ8NDV3 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC4.06□□□□□ -1.76
SMC1BQ8NDV3 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
SMC1BQ8NDV3 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC4.05□□□□□ -1.76
SMC1BQ8NDV3 MIR412-201ENST00000362142 91 ntBASIC4.05□□□□□ -1.76
SMC1BQ8NDV3 Y_RNA.135-201ENST00000363439 95 ntBASIC4.05□□□□□ -1.76
SMC1BQ8NDV3 Y_RNA.339-201ENST00000365325 102 ntBASIC4.05□□□□□ -1.76
SMC1BQ8NDV3 RNU6-214P-201ENST00000384130 107 ntBASIC4.05□□□□□ -1.76
SMC1BQ8NDV3 AL360182.1-201ENST00000397433 468 ntBASIC4.05□□□□□ -1.76
SMC1BQ8NDV3 HSPE1P26-201ENST00000405341 275 ntBASIC4.05□□□□□ -1.76
SMC1BQ8NDV3 RNU2-37P-201ENST00000410695 177 ntBASIC4.05□□□□□ -1.76
SMC1BQ8NDV3 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC4.05□□□□□ -1.76
SMC1BQ8NDV3 MTCO2P27-201ENST00000420740 428 ntBASIC4.05□□□□□ -1.76
SMC1BQ8NDV3 TMEM167AP1-201ENST00000423409 219 ntBASIC4.05□□□□□ -1.76
SMC1BQ8NDV3 AC092573.2-201ENST00000434546 243 ntBASIC4.05□□□□□ -1.76
SMC1BQ8NDV3 AL359672.1-201ENST00000442302 409 ntBASIC4.05□□□□□ -1.76
SMC1BQ8NDV3 RNU7-138P-201ENST00000459479 64 ntBASIC4.05□□□□□ -1.76
SMC1BQ8NDV3 AC087884.1-201ENST00000469738 328 ntBASIC4.05□□□□□ -1.76
SMC1BQ8NDV3 RPL7P47-201ENST00000497299 556 ntBASIC4.05□□□□□ -1.76
SMC1BQ8NDV3 RPS27P27-201ENST00000498779 255 ntBASIC4.05□□□□□ -1.76
SMC1BQ8NDV3 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC4.05□□□□□ -1.76
SMC1BQ8NDV3 RN7SKP24-201ENST00000515888 284 ntBASIC4.05□□□□□ -1.76
SMC1BQ8NDV3 RNU6-1332P-201ENST00000516666 104 ntBASIC4.05□□□□□ -1.76
SMC1BQ8NDV3 RNA5SP165-201ENST00000517142 115 ntBASIC4.05□□□□□ -1.76
SMC1BQ8NDV3 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC4.05□□□□□ -1.76
SMC1BQ8NDV3 POLR3GP2-201ENST00000588366 668 ntBASIC4.05□□□□□ -1.76
SMC1BQ8NDV3 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC4.05□□□□□ -1.76
SMC1BQ8NDV3 APOOP1-201ENST00000604695 592 ntBASIC4.05□□□□□ -1.76
SMC1BQ8NDV3 AC016727.1-205ENST00000605437 569 ntBASIC4.05□□□□□ -1.76
SMC1BQ8NDV3 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC4.05□□□□□ -1.76
SMC1BQ8NDV3 ZNF519P1-201ENST00000449011 1626 ntBASIC4.05□□□□□ -1.76
SMC1BQ8NDV3 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
SMC1BQ8NDV3 UBE3AP2-201ENST00000429033 2259 ntBASIC4.05□□□□□ -1.76
SMC1BQ8NDV3 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
SMC1BQ8NDV3 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
SMC1BQ8NDV3 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
SMC1BQ8NDV3 MIR325-201ENST00000385260 98 ntBASIC4.04□□□□□ -1.76
SMC1BQ8NDV3 U3.42-201ENST00000408746 214 ntBASIC4.04□□□□□ -1.76
SMC1BQ8NDV3 RN7SKP158-201ENST00000410453 326 ntBASIC4.04□□□□□ -1.76
SMC1BQ8NDV3 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC4.04□□□□□ -1.76
SMC1BQ8NDV3 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC4.04□□□□□ -1.76
SMC1BQ8NDV3 RPS3AP52-201ENST00000435639 297 ntBASIC4.04□□□□□ -1.76
SMC1BQ8NDV3 LAMTOR5P1-201ENST00000444290 270 ntBASIC4.04□□□□□ -1.76
SMC1BQ8NDV3 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC4.04□□□□□ -1.76
SMC1BQ8NDV3 RPL9P32-201ENST00000464118 620 ntBASIC4.04□□□□□ -1.76
SMC1BQ8NDV3 AC026801.1-201ENST00000497178 464 ntBASIC4.04□□□□□ -1.76
SMC1BQ8NDV3 ENSA-210ENST00000503241 574 ntTSL 3 BASIC4.04□□□□□ -1.76
SMC1BQ8NDV3 MTND5P5-201ENST00000503764 376 ntBASIC4.04□□□□□ -1.76
SMC1BQ8NDV3 RNU1-61P-201ENST00000516107 151 ntBASIC4.04□□□□□ -1.76
SMC1BQ8NDV3 MIR892C-201ENST00000516410 77 ntBASIC4.04□□□□□ -1.76
SMC1BQ8NDV3 RNU6-1282P-201ENST00000516735 96 ntBASIC4.04□□□□□ -1.76
SMC1BQ8NDV3 AP005639.2-201ENST00000527592 928 ntBASIC4.04□□□□□ -1.76
SMC1BQ8NDV3 HPRT1P3-201ENST00000539521 576 ntBASIC4.04□□□□□ -1.76
SMC1BQ8NDV3 TRAV37-201ENST00000553906 342 ntBASIC4.04□□□□□ -1.76
SMC1BQ8NDV3 AC091544.4-201ENST00000555268 342 ntBASIC4.04□□□□□ -1.76
SMC1BQ8NDV3 AL021368.2-201ENST00000606125 5352 ntBASIC4.03□□□□□ -1.76
SMC1BQ8NDV3 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC4.03□□□□□ -1.76
SMC1BQ8NDV3 AC022336.2-201ENST00000568966 2538 ntBASIC4.03□□□□□ -1.76
SMC1BQ8NDV3 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
SMC1BQ8NDV3 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC4.03□□□□□ -1.76
SMC1BQ8NDV3 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC4.03□□□□□ -1.76
SMC1BQ8NDV3 MFSD8-233ENST00000641482 4860 ntBASIC4.03□□□□□ -1.76
SMC1BQ8NDV3 XGY1-201ENST00000381172 446 ntBASIC4.03□□□□□ -1.76
SMC1BQ8NDV3 MTHFD2P2-201ENST00000407725 247 ntBASIC4.03□□□□□ -1.76
SMC1BQ8NDV3 RNA5SP508-201ENST00000411327 119 ntBASIC4.03□□□□□ -1.76
SMC1BQ8NDV3 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC4.03□□□□□ -1.76
SMC1BQ8NDV3 YPEL5P1-201ENST00000419731 367 ntBASIC4.03□□□□□ -1.76
SMC1BQ8NDV3 AC092047.1-201ENST00000424997 240 ntBASIC4.03□□□□□ -1.76
SMC1BQ8NDV3 TOMM20P4-201ENST00000427861 435 ntBASIC4.03□□□□□ -1.76
SMC1BQ8NDV3 SNRPEP9-201ENST00000436794 238 ntBASIC4.03□□□□□ -1.76
SMC1BQ8NDV3 AC010095.1-201ENST00000443543 144 ntBASIC4.03□□□□□ -1.76
SMC1BQ8NDV3 MTND1P17-201ENST00000448961 204 ntBASIC4.03□□□□□ -1.76
SMC1BQ8NDV3 CEACAMP4-201ENST00000457676 421 ntBASIC4.03□□□□□ -1.76
SMC1BQ8NDV3 RN7SL863P-201ENST00000462370 296 ntBASIC4.03□□□□□ -1.76
SMC1BQ8NDV3 AC104472.2-201ENST00000469035 601 ntBASIC4.03□□□□□ -1.76
SMC1BQ8NDV3 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC4.03□□□□□ -1.76
SMC1BQ8NDV3 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC4.03□□□□□ -1.76
SMC1BQ8NDV3 AC091826.1-201ENST00000514065 313 ntBASIC4.03□□□□□ -1.76
SMC1BQ8NDV3 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC4.03□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 127.3 ms