Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC4.67□□□□□ -1.66
DEPDC4Q8N2C3 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
DEPDC4Q8N2C3 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
DEPDC4Q8N2C3 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
DEPDC4Q8N2C3 RNY1P5-201ENST00000383890 115 ntBASIC4.67□□□□□ -1.66
DEPDC4Q8N2C3 RNU6-245P-201ENST00000384020 107 ntBASIC4.67□□□□□ -1.66
DEPDC4Q8N2C3 Y_RNA.435-201ENST00000384095 112 ntBASIC4.67□□□□□ -1.66
DEPDC4Q8N2C3 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
DEPDC4Q8N2C3 RNA5SP339-201ENST00000390987 122 ntBASIC4.67□□□□□ -1.66
DEPDC4Q8N2C3 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC4.67□□□□□ -1.66
DEPDC4Q8N2C3 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC4.67□□□□□ -1.66
DEPDC4Q8N2C3 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC4.67□□□□□ -1.66
DEPDC4Q8N2C3 AC072052.1-201ENST00000496556 306 ntBASIC4.67□□□□□ -1.66
DEPDC4Q8N2C3 AC008953.1-201ENST00000497334 318 ntBASIC4.67□□□□□ -1.66
DEPDC4Q8N2C3 TRAPPC2P7-201ENST00000509650 231 ntBASIC4.67□□□□□ -1.66
DEPDC4Q8N2C3 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC4.67□□□□□ -1.66
DEPDC4Q8N2C3 Y_RNA.662-201ENST00000516028 97 ntBASIC4.67□□□□□ -1.66
DEPDC4Q8N2C3 RNU6-928P-201ENST00000516876 104 ntBASIC4.67□□□□□ -1.66
DEPDC4Q8N2C3 IGKV2-38-201ENST00000517443 247 ntBASIC4.67□□□□□ -1.66
DEPDC4Q8N2C3 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC4.67□□□□□ -1.66
DEPDC4Q8N2C3 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
DEPDC4Q8N2C3 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC4.67□□□□□ -1.66
DEPDC4Q8N2C3 Mico1.1-201ENST00000611698 204 ntBASIC4.67□□□□□ -1.66
DEPDC4Q8N2C3 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC4.67□□□□□ -1.66
DEPDC4Q8N2C3 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC4.67□□□□□ -1.66
DEPDC4Q8N2C3 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
DEPDC4Q8N2C3 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
DEPDC4Q8N2C3 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
DEPDC4Q8N2C3 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.67□□□□□ -1.66
DEPDC4Q8N2C3 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
DEPDC4Q8N2C3 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
DEPDC4Q8N2C3 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
DEPDC4Q8N2C3 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.66
DEPDC4Q8N2C3 BX322639.1-202ENST00000423987 2213 ntBASIC4.66□□□□□ -1.66
DEPDC4Q8N2C3 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.66□□□□□ -1.66
DEPDC4Q8N2C3 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
DEPDC4Q8N2C3 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.66
DEPDC4Q8N2C3 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC4.66□□□□□ -1.66
DEPDC4Q8N2C3 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
DEPDC4Q8N2C3 MIR133B-201ENST00000362210 119 ntBASIC4.66□□□□□ -1.66
DEPDC4Q8N2C3 Y_RNA.240-201ENST00000364469 95 ntBASIC4.66□□□□□ -1.66
DEPDC4Q8N2C3 RNA5SP90-201ENST00000364801 99 ntBASIC4.66□□□□□ -1.66
DEPDC4Q8N2C3 RNU6-47P-201ENST00000383866 107 ntBASIC4.66□□□□□ -1.66
DEPDC4Q8N2C3 RNU6-1289P-201ENST00000384431 106 ntBASIC4.66□□□□□ -1.66
DEPDC4Q8N2C3 SNORA1.3-201ENST00000384676 136 ntBASIC4.66□□□□□ -1.66
DEPDC4Q8N2C3 MIR550A3-201ENST00000390735 95 ntBASIC4.66□□□□□ -1.66
DEPDC4Q8N2C3 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC4.66□□□□□ -1.66
DEPDC4Q8N2C3 RN7SKP177-201ENST00000410567 355 ntBASIC4.66□□□□□ -1.66
DEPDC4Q8N2C3 RNU6-651P-201ENST00000411040 105 ntBASIC4.66□□□□□ -1.66
DEPDC4Q8N2C3 RN7SKP100-201ENST00000411258 284 ntBASIC4.66□□□□□ -1.66
DEPDC4Q8N2C3 CYCSP48-201ENST00000417124 323 ntBASIC4.66□□□□□ -1.66
DEPDC4Q8N2C3 AC108075.1-201ENST00000424692 529 ntBASIC4.66□□□□□ -1.66
DEPDC4Q8N2C3 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.66□□□□□ -1.66
DEPDC4Q8N2C3 AC092017.2-201ENST00000427600 362 ntBASIC4.66□□□□□ -1.66
DEPDC4Q8N2C3 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC4.66□□□□□ -1.66
DEPDC4Q8N2C3 RPS29P10-201ENST00000439197 166 ntBASIC4.66□□□□□ -1.66
DEPDC4Q8N2C3 AC010095.1-201ENST00000443543 144 ntBASIC4.66□□□□□ -1.66
DEPDC4Q8N2C3 RPS29P20-201ENST00000489592 171 ntBASIC4.66□□□□□ -1.66
DEPDC4Q8N2C3 RNU1-61P-201ENST00000516107 151 ntBASIC4.66□□□□□ -1.66
DEPDC4Q8N2C3 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.66□□□□□ -1.66
DEPDC4Q8N2C3 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC4.66□□□□□ -1.66
DEPDC4Q8N2C3 CYCSP40-201ENST00000575927 294 ntBASIC4.66□□□□□ -1.66
DEPDC4Q8N2C3 MIR3609-201ENST00000582661 80 ntBASIC4.66□□□□□ -1.66
DEPDC4Q8N2C3 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC4.66□□□□□ -1.66
DEPDC4Q8N2C3 MZT1P2-201ENST00000604387 248 ntBASIC4.66□□□□□ -1.66
DEPDC4Q8N2C3 AC132825.6-201ENST00000638861 357 ntBASIC4.66□□□□□ -1.66
DEPDC4Q8N2C3 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
DEPDC4Q8N2C3 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
DEPDC4Q8N2C3 MAPK10-263ENST00000641052 4307 ntBASIC4.66□□□□□ -1.66
DEPDC4Q8N2C3 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC4.66□□□□□ -1.66
DEPDC4Q8N2C3 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC4.66□□□□□ -1.66
DEPDC4Q8N2C3 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
DEPDC4Q8N2C3 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC4.65□□□□□ -1.66
DEPDC4Q8N2C3 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
DEPDC4Q8N2C3 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.66
DEPDC4Q8N2C3 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.66
DEPDC4Q8N2C3 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC4.65□□□□□ -1.66
DEPDC4Q8N2C3 RNA5SP183-201ENST00000362452 119 ntBASIC4.65□□□□□ -1.67
DEPDC4Q8N2C3 SNORD113-1-201ENST00000365321 69 ntBASIC4.65□□□□□ -1.67
DEPDC4Q8N2C3 RNU6ATAC21P-201ENST00000408656 126 ntBASIC4.65□□□□□ -1.67
DEPDC4Q8N2C3 RN7SKP213-201ENST00000410746 298 ntBASIC4.65□□□□□ -1.67
DEPDC4Q8N2C3 SETP5-201ENST00000437270 562 ntBASIC4.65□□□□□ -1.67
DEPDC4Q8N2C3 TMSB4XP3-201ENST00000445144 114 ntBASIC4.65□□□□□ -1.67
DEPDC4Q8N2C3 NUTF2P3-201ENST00000448540 384 ntBASIC4.65□□□□□ -1.67
DEPDC4Q8N2C3 AC073850.1-201ENST00000449243 255 ntBASIC4.65□□□□□ -1.67
DEPDC4Q8N2C3 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC4.65□□□□□ -1.67
DEPDC4Q8N2C3 snoU13.6-201ENST00000458785 104 ntBASIC4.65□□□□□ -1.67
DEPDC4Q8N2C3 AC022795.1-201ENST00000473808 480 ntBASIC4.65□□□□□ -1.67
DEPDC4Q8N2C3 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC4.65□□□□□ -1.67
DEPDC4Q8N2C3 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC4.65□□□□□ -1.67
DEPDC4Q8N2C3 AP005660.1-201ENST00000522972 293 ntBASIC4.65□□□□□ -1.67
DEPDC4Q8N2C3 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC4.65□□□□□ -1.67
DEPDC4Q8N2C3 BPIFA4P-203ENST00000603168 689 ntBASIC4.65□□□□□ -1.67
DEPDC4Q8N2C3 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC4.65□□□□□ -1.67
DEPDC4Q8N2C3 MIR6820-201ENST00000611508 62 ntBASIC4.65□□□□□ -1.67
DEPDC4Q8N2C3 AC073308.1-201ENST00000623696 305 ntBASIC4.65□□□□□ -1.67
DEPDC4Q8N2C3 AC048347.1-201ENST00000624621 427 ntBASIC4.65□□□□□ -1.67
DEPDC4Q8N2C3 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC4.65□□□□□ -1.67
DEPDC4Q8N2C3 AL133243.3-201ENST00000617415 3004 ntBASIC4.65□□□□□ -1.67
DEPDC4Q8N2C3 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 151.3 ms