Protein–RNA interactions for Protein: Q8N1B4

VPS52, Vacuolar protein sorting-associated protein 52 homolog, humanhuman

Predictions only

Length 723 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52Q8N1B4 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC3.29□□□□□ -1.88
VPS52Q8N1B4 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC3.28□□□□□ -1.88
VPS52Q8N1B4 RNU6-799P-201ENST00000363567 107 ntBASIC3.28□□□□□ -1.88
VPS52Q8N1B4 Y_RNA.167-201ENST00000363735 109 ntBASIC3.28□□□□□ -1.88
VPS52Q8N1B4 RNU4-66P-201ENST00000365199 138 ntBASIC3.28□□□□□ -1.88
VPS52Q8N1B4 RNU6-715P-201ENST00000365204 103 ntBASIC3.28□□□□□ -1.88
VPS52Q8N1B4 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
VPS52Q8N1B4 SNORA16.2-201ENST00000390991 127 ntBASIC3.28□□□□□ -1.88
VPS52Q8N1B4 RPS4XP3-201ENST00000398541 413 ntBASIC3.28□□□□□ -1.88
VPS52Q8N1B4 AL031121.1-201ENST00000406553 254 ntBASIC3.28□□□□□ -1.88
VPS52Q8N1B4 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.28□□□□□ -1.88
VPS52Q8N1B4 NDUFB4P5-201ENST00000415445 361 ntBASIC3.28□□□□□ -1.88
VPS52Q8N1B4 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC3.28□□□□□ -1.88
VPS52Q8N1B4 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC3.28□□□□□ -1.88
VPS52Q8N1B4 AC244505.4-201ENST00000434905 287 ntBASIC3.28□□□□□ -1.88
VPS52Q8N1B4 SNRPEP9-201ENST00000436794 238 ntBASIC3.28□□□□□ -1.88
VPS52Q8N1B4 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC3.28□□□□□ -1.88
VPS52Q8N1B4 SSXP5-201ENST00000443473 287 ntBASIC3.28□□□□□ -1.88
VPS52Q8N1B4 AL360271.2-201ENST00000447710 161 ntBASIC3.28□□□□□ -1.88
VPS52Q8N1B4 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC3.28□□□□□ -1.88
VPS52Q8N1B4 CECR9-201ENST00000453421 199 ntBASIC3.28□□□□□ -1.88
VPS52Q8N1B4 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC3.28□□□□□ -1.88
VPS52Q8N1B4 AP000852.1-201ENST00000472460 573 ntBASIC3.28□□□□□ -1.88
VPS52Q8N1B4 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3.28□□□□□ -1.88
VPS52Q8N1B4 CENPUP1-201ENST00000526649 1202 ntBASIC3.28□□□□□ -1.88
VPS52Q8N1B4 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC3.28□□□□□ -1.88
VPS52Q8N1B4 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.28□□□□□ -1.88
VPS52Q8N1B4 AC018638.8-201ENST00000588755 281 ntBASIC3.28□□□□□ -1.88
VPS52Q8N1B4 BNIP3P10-201ENST00000605360 577 ntBASIC3.28□□□□□ -1.88
VPS52Q8N1B4 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
VPS52Q8N1B4 AC008264.2-201ENST00000610193 3731 ntBASIC3.28□□□□□ -1.89
VPS52Q8N1B4 AC233263.6-201ENST00000631132 1963 ntBASIC3.27□□□□□ -1.89
VPS52Q8N1B4 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
VPS52Q8N1B4 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
VPS52Q8N1B4 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
VPS52Q8N1B4 RNU6-140P-201ENST00000384566 108 ntBASIC3.27□□□□□ -1.89
VPS52Q8N1B4 RNU6-332P-201ENST00000391193 108 ntBASIC3.27□□□□□ -1.89
VPS52Q8N1B4 AL139039.1-201ENST00000401900 692 ntBASIC3.27□□□□□ -1.89
VPS52Q8N1B4 FAT1P1-201ENST00000406588 507 ntBASIC3.27□□□□□ -1.89
VPS52Q8N1B4 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC3.27□□□□□ -1.89
VPS52Q8N1B4 ZNF863P-201ENST00000426746 417 ntBASIC3.27□□□□□ -1.89
VPS52Q8N1B4 MYL8P-204ENST00000431574 518 ntBASIC3.27□□□□□ -1.89
VPS52Q8N1B4 AL121601.2-201ENST00000438019 707 ntBASIC3.27□□□□□ -1.89
VPS52Q8N1B4 RN7SL75P-201ENST00000461926 281 ntBASIC3.27□□□□□ -1.89
VPS52Q8N1B4 RPS26P21-201ENST00000475397 348 ntBASIC3.27□□□□□ -1.89
VPS52Q8N1B4 RPS29P26-201ENST00000477483 171 ntBASIC3.27□□□□□ -1.89
VPS52Q8N1B4 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC3.27□□□□□ -1.89
VPS52Q8N1B4 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC3.27□□□□□ -1.89
VPS52Q8N1B4 MTCO2P30-201ENST00000503662 364 ntBASIC3.27□□□□□ -1.89
VPS52Q8N1B4 AC018710.1-201ENST00000506509 158 ntBASIC3.27□□□□□ -1.89
VPS52Q8N1B4 RNU2-69P-201ENST00000516061 100 ntBASIC3.27□□□□□ -1.89
VPS52Q8N1B4 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.27□□□□□ -1.89
VPS52Q8N1B4 OR11H5P-201ENST00000554039 926 ntBASIC3.27□□□□□ -1.89
VPS52Q8N1B4 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC3.27□□□□□ -1.89
VPS52Q8N1B4 MIR548AC-201ENST00000585049 88 ntBASIC3.27□□□□□ -1.89
VPS52Q8N1B4 FTX_3.1-201ENST00000610451 147 ntBASIC3.27□□□□□ -1.89
VPS52Q8N1B4 AP003400.5-201ENST00000624827 617 ntBASIC3.27□□□□□ -1.89
VPS52Q8N1B4 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC3.27□□□□□ -1.89
VPS52Q8N1B4 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC3.27□□□□□ -1.89
VPS52Q8N1B4 AC099654.7-201ENST00000635788 2127 ntBASIC3.27□□□□□ -1.89
VPS52Q8N1B4 AC121333.1-201ENST00000567488 2709 ntBASIC3.27□□□□□ -1.89
VPS52Q8N1B4 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
VPS52Q8N1B4 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.26□□□□□ -1.89
VPS52Q8N1B4 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC3.26□□□□□ -1.89
VPS52Q8N1B4 FTLP6-201ENST00000355274 422 ntBASIC3.26□□□□□ -1.89
VPS52Q8N1B4 Y_RNA.72-201ENST00000362894 103 ntBASIC3.26□□□□□ -1.89
VPS52Q8N1B4 Y_RNA.279-201ENST00000364763 95 ntBASIC3.26□□□□□ -1.89
VPS52Q8N1B4 SNORA51.4-201ENST00000364993 124 ntBASIC3.26□□□□□ -1.89
VPS52Q8N1B4 RNU6-395P-201ENST00000365662 106 ntBASIC3.26□□□□□ -1.89
VPS52Q8N1B4 RNU6-434P-201ENST00000384376 107 ntBASIC3.26□□□□□ -1.89
VPS52Q8N1B4 RNU6-393P-201ENST00000384475 107 ntBASIC3.26□□□□□ -1.89
VPS52Q8N1B4 SNORD70.1-201ENST00000391007 85 ntBASIC3.26□□□□□ -1.89
VPS52Q8N1B4 RNU6-876P-201ENST00000391295 104 ntBASIC3.26□□□□□ -1.89
VPS52Q8N1B4 CD3D-202ENST00000392884 476 ntTSL 2 BASIC3.26□□□□□ -1.89
VPS52Q8N1B4 Y_RNA.604-201ENST00000410574 102 ntBASIC3.26□□□□□ -1.89
VPS52Q8N1B4 RN7SKP58-201ENST00000411010 305 ntBASIC3.26□□□□□ -1.89
VPS52Q8N1B4 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC3.26□□□□□ -1.89
VPS52Q8N1B4 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC3.26□□□□□ -1.89
VPS52Q8N1B4 AL139132.1-201ENST00000431587 344 ntBASIC3.26□□□□□ -1.89
VPS52Q8N1B4 AL590664.1-201ENST00000448065 339 ntBASIC3.26□□□□□ -1.89
VPS52Q8N1B4 MTND3P10-201ENST00000450967 341 ntBASIC3.26□□□□□ -1.89
VPS52Q8N1B4 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC3.26□□□□□ -1.89
VPS52Q8N1B4 RNU6-1208P-201ENST00000459588 107 ntBASIC3.26□□□□□ -1.89
VPS52Q8N1B4 RPL21P93-201ENST00000480465 489 ntBASIC3.26□□□□□ -1.89
VPS52Q8N1B4 AC022493.1-201ENST00000492984 337 ntBASIC3.26□□□□□ -1.89
VPS52Q8N1B4 Y_RNA.654-201ENST00000497848 106 ntBASIC3.26□□□□□ -1.89
VPS52Q8N1B4 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC3.26□□□□□ -1.89
VPS52Q8N1B4 Y_RNA.665-201ENST00000516177 98 ntBASIC3.26□□□□□ -1.89
VPS52Q8N1B4 RNA5SP165-201ENST00000517142 115 ntBASIC3.26□□□□□ -1.89
VPS52Q8N1B4 AC009902.1-201ENST00000519351 183 ntBASIC3.26□□□□□ -1.89
VPS52Q8N1B4 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC3.26□□□□□ -1.89
VPS52Q8N1B4 AL121579.1-201ENST00000555129 305 ntBASIC3.26□□□□□ -1.89
VPS52Q8N1B4 GTF3AP2-201ENST00000557014 266 ntBASIC3.26□□□□□ -1.89
VPS52Q8N1B4 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.26□□□□□ -1.89
VPS52Q8N1B4 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.26□□□□□ -1.89
VPS52Q8N1B4 RPL23AP78-201ENST00000599928 470 ntBASIC3.26□□□□□ -1.89
VPS52Q8N1B4 HSPE1P7-201ENST00000604681 321 ntBASIC3.26□□□□□ -1.89
VPS52Q8N1B4 AC004805.2-201ENST00000605382 482 ntBASIC3.26□□□□□ -1.89
VPS52Q8N1B4 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC3.26□□□□□ -1.89
VPS52Q8N1B4 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 119.6 ms