Protein–RNA interactions for Protein: Q8IXF0

NPAS3, Neuronal PAS domain-containing protein 3, humanhuman

Predictions only

Length 933 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3Q8IXF0 MIR659-201ENST00000384963 97 ntBASIC4.84□□□□□ -1.63
NPAS3Q8IXF0 MIR301A-201ENST00000385261 86 ntBASIC4.84□□□□□ -1.63
NPAS3Q8IXF0 MT-TT-201ENST00000387460 66 ntBASIC4.84□□□□□ -1.63
NPAS3Q8IXF0 RNU6-1248P-201ENST00000391096 64 ntBASIC4.84□□□□□ -1.63
NPAS3Q8IXF0 RNA5SP225-201ENST00000410874 135 ntBASIC4.84□□□□□ -1.63
NPAS3Q8IXF0 AC010095.1-201ENST00000443543 144 ntBASIC4.84□□□□□ -1.63
NPAS3Q8IXF0 AL158147.1-201ENST00000443970 75 ntBASIC4.84□□□□□ -1.63
NPAS3Q8IXF0 RPS27P1-201ENST00000450552 247 ntBASIC4.84□□□□□ -1.63
NPAS3Q8IXF0 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC4.84□□□□□ -1.63
NPAS3Q8IXF0 RNU5F-2P-201ENST00000516066 82 ntBASIC4.84□□□□□ -1.63
NPAS3Q8IXF0 IGLVIV-65-201ENST00000517313 360 ntBASIC4.84□□□□□ -1.63
NPAS3Q8IXF0 IGKV2D-36-201ENST00000518643 226 ntBASIC4.84□□□□□ -1.63
NPAS3Q8IXF0 AC004467.1-201ENST00000615678 330 ntBASIC4.84□□□□□ -1.63
NPAS3Q8IXF0 AP001318.4-201ENST00000616637 121 ntBASIC4.84□□□□□ -1.63
NPAS3Q8IXF0 AC104260.2-201ENST00000623551 3497 ntBASIC4.84□□□□□ -1.63
NPAS3Q8IXF0 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC4.84□□□□□ -1.64
NPAS3Q8IXF0 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC4.84□□□□□ -1.64
NPAS3Q8IXF0 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.84□□□□□ -1.64
NPAS3Q8IXF0 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC4.84□□□□□ -1.64
NPAS3Q8IXF0 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC4.84□□□□□ -1.64
NPAS3Q8IXF0 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
NPAS3Q8IXF0 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC4.84□□□□□ -1.64
NPAS3Q8IXF0 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
NPAS3Q8IXF0 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
NPAS3Q8IXF0 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC4.83□□□□□ -1.64
NPAS3Q8IXF0 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
NPAS3Q8IXF0 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC4.83□□□□□ -1.64
NPAS3Q8IXF0 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
NPAS3Q8IXF0 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
NPAS3Q8IXF0 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC4.83□□□□□ -1.64
NPAS3Q8IXF0 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
NPAS3Q8IXF0 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
NPAS3Q8IXF0 SNORA51.10-201ENST00000384418 136 ntBASIC4.83□□□□□ -1.64
NPAS3Q8IXF0 MIR888-201ENST00000401186 77 ntBASIC4.83□□□□□ -1.64
NPAS3Q8IXF0 Z98745.1-201ENST00000402553 494 ntBASIC4.83□□□□□ -1.64
NPAS3Q8IXF0 ELOCP21-201ENST00000412558 336 ntBASIC4.83□□□□□ -1.64
NPAS3Q8IXF0 RAB9AP3-201ENST00000412737 573 ntBASIC4.83□□□□□ -1.64
NPAS3Q8IXF0 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC4.83□□□□□ -1.64
NPAS3Q8IXF0 AL356387.2-201ENST00000422272 243 ntBASIC4.83□□□□□ -1.64
NPAS3Q8IXF0 PPP1R11P2-201ENST00000423543 382 ntBASIC4.83□□□□□ -1.64
NPAS3Q8IXF0 AC090774.1-201ENST00000435925 246 ntBASIC4.83□□□□□ -1.64
NPAS3Q8IXF0 RAB9AP1-201ENST00000449393 573 ntBASIC4.83□□□□□ -1.64
NPAS3Q8IXF0 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC4.83□□□□□ -1.64
NPAS3Q8IXF0 Y_RNA.649-201ENST00000459077 103 ntBASIC4.83□□□□□ -1.64
NPAS3Q8IXF0 RPL7AP28-201ENST00000464513 571 ntBASIC4.83□□□□□ -1.64
NPAS3Q8IXF0 AC073073.1-201ENST00000493920 463 ntBASIC4.83□□□□□ -1.64
NPAS3Q8IXF0 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
NPAS3Q8IXF0 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
NPAS3Q8IXF0 AC090142.3-201ENST00000519012 385 ntBASIC4.83□□□□□ -1.64
NPAS3Q8IXF0 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC4.83□□□□□ -1.64
NPAS3Q8IXF0 MIR3138-201ENST00000585238 82 ntBASIC4.83□□□□□ -1.64
NPAS3Q8IXF0 AL360181.4-201ENST00000621752 134 ntBASIC4.83□□□□□ -1.64
NPAS3Q8IXF0 AC091932.3-201ENST00000624223 323 ntBASIC4.83□□□□□ -1.64
NPAS3Q8IXF0 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC4.83□□□□□ -1.64
NPAS3Q8IXF0 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
NPAS3Q8IXF0 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
NPAS3Q8IXF0 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC4.83□□□□□ -1.64
NPAS3Q8IXF0 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
NPAS3Q8IXF0 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
NPAS3Q8IXF0 THAP12P5-201ENST00000405864 2275 ntBASIC4.83□□□□□ -1.64
NPAS3Q8IXF0 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC4.82□□□□□ -1.64
NPAS3Q8IXF0 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
NPAS3Q8IXF0 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC4.82□□□□□ -1.64
NPAS3Q8IXF0 AC083843.2-201ENST00000568248 6253 ntBASIC4.82□□□□□ -1.64
NPAS3Q8IXF0 FTX-210ENST00000603037 8347 ntTSL 5 BASIC4.82□□□□□ -1.64
NPAS3Q8IXF0 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
NPAS3Q8IXF0 MIR412-201ENST00000362142 91 ntBASIC4.82□□□□□ -1.64
NPAS3Q8IXF0 RNU6-1082P-201ENST00000364574 107 ntBASIC4.82□□□□□ -1.64
NPAS3Q8IXF0 Y_RNA.393-201ENST00000383936 102 ntBASIC4.82□□□□□ -1.64
NPAS3Q8IXF0 RNU6-813P-201ENST00000384691 107 ntBASIC4.82□□□□□ -1.64
NPAS3Q8IXF0 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
NPAS3Q8IXF0 RNU2-21P-201ENST00000410368 188 ntBASIC4.82□□□□□ -1.64
NPAS3Q8IXF0 AL158156.1-201ENST00000422509 473 ntBASIC4.82□□□□□ -1.64
NPAS3Q8IXF0 RPS27AP12-201ENST00000429552 465 ntBASIC4.82□□□□□ -1.64
NPAS3Q8IXF0 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC4.82□□□□□ -1.64
NPAS3Q8IXF0 EEF1A1P1-201ENST00000447052 739 ntBASIC4.82□□□□□ -1.64
NPAS3Q8IXF0 RNU6-1218P-201ENST00000458990 108 ntBASIC4.82□□□□□ -1.64
NPAS3Q8IXF0 GMPSP1-201ENST00000514075 579 ntBASIC4.82□□□□□ -1.64
NPAS3Q8IXF0 RNU6-1146P-201ENST00000516282 102 ntBASIC4.82□□□□□ -1.64
NPAS3Q8IXF0 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.82□□□□□ -1.64
NPAS3Q8IXF0 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC4.82□□□□□ -1.64
NPAS3Q8IXF0 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC4.82□□□□□ -1.64
NPAS3Q8IXF0 AC015914.2-201ENST00000618167 288 ntBASIC4.82□□□□□ -1.64
NPAS3Q8IXF0 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
NPAS3Q8IXF0 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
NPAS3Q8IXF0 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC4.82□□□□□ -1.64
NPAS3Q8IXF0 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
NPAS3Q8IXF0 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
NPAS3Q8IXF0 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
NPAS3Q8IXF0 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
NPAS3Q8IXF0 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
NPAS3Q8IXF0 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC4.81□□□□□ -1.64
NPAS3Q8IXF0 RNU6-249P-201ENST00000363016 102 ntBASIC4.81□□□□□ -1.64
NPAS3Q8IXF0 Y_RNA.329-201ENST00000365209 107 ntBASIC4.81□□□□□ -1.64
NPAS3Q8IXF0 SNORD58C-201ENST00000365223 64 ntBASIC4.81□□□□□ -1.64
NPAS3Q8IXF0 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC4.81□□□□□ -1.64
NPAS3Q8IXF0 RNU6-1286P-201ENST00000383871 107 ntBASIC4.81□□□□□ -1.64
NPAS3Q8IXF0 RNU6-969P-201ENST00000383900 105 ntBASIC4.81□□□□□ -1.64
NPAS3Q8IXF0 SNORA75.5-201ENST00000391291 81 ntBASIC4.81□□□□□ -1.64
NPAS3Q8IXF0 RNU6-1199P-201ENST00000411249 104 ntBASIC4.81□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms