Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 PARP4P3-201ENST00000510265 317 ntBASIC4.9□□□□□ -1.63
TRIM50Q86XT4 RNA5SP497-201ENST00000516081 97 ntBASIC4.9□□□□□ -1.63
TRIM50Q86XT4 RNA5SP315-201ENST00000516340 116 ntBASIC4.9□□□□□ -1.63
TRIM50Q86XT4 RNA5SP312-201ENST00000517068 116 ntBASIC4.9□□□□□ -1.63
TRIM50Q86XT4 TRAPPC2P2-201ENST00000517589 409 ntBASIC4.9□□□□□ -1.63
TRIM50Q86XT4 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC4.9□□□□□ -1.63
TRIM50Q86XT4 AC005255.1-201ENST00000593748 216 ntBASIC4.9□□□□□ -1.63
TRIM50Q86XT4 AL160290.3-201ENST00000604869 165 ntBASIC4.9□□□□□ -1.63
TRIM50Q86XT4 AL591034.3-201ENST00000605511 685 ntBASIC4.9□□□□□ -1.63
TRIM50Q86XT4 AC023043.4-201ENST00000612081 449 ntBASIC4.9□□□□□ -1.63
TRIM50Q86XT4 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.63
TRIM50Q86XT4 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC4.9□□□□□ -1.63
TRIM50Q86XT4 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
TRIM50Q86XT4 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
TRIM50Q86XT4 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.9□□□□□ -1.63
TRIM50Q86XT4 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
TRIM50Q86XT4 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
TRIM50Q86XT4 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
TRIM50Q86XT4 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.89□□□□□ -1.63
TRIM50Q86XT4 RNA5SP361-201ENST00000362686 118 ntBASIC4.89□□□□□ -1.63
TRIM50Q86XT4 SNORD63-201ENST00000384262 68 ntBASIC4.89□□□□□ -1.63
TRIM50Q86XT4 RNU6-541P-201ENST00000384709 110 ntBASIC4.89□□□□□ -1.63
TRIM50Q86XT4 SNORA19-201ENST00000384737 128 ntBASIC4.89□□□□□ -1.63
TRIM50Q86XT4 SNORA53-201ENST00000391141 249 ntBASIC4.89□□□□□ -1.63
TRIM50Q86XT4 RPS4XP3-201ENST00000398541 413 ntBASIC4.89□□□□□ -1.63
TRIM50Q86XT4 HMGN2P30-201ENST00000423237 256 ntBASIC4.89□□□□□ -1.63
TRIM50Q86XT4 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC4.89□□□□□ -1.63
TRIM50Q86XT4 AC005002.2-201ENST00000438228 269 ntBASIC4.89□□□□□ -1.63
TRIM50Q86XT4 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC4.89□□□□□ -1.63
TRIM50Q86XT4 MTATP6P7-201ENST00000453315 681 ntBASIC4.89□□□□□ -1.63
TRIM50Q86XT4 RPL23AP14-201ENST00000468281 468 ntBASIC4.89□□□□□ -1.63
TRIM50Q86XT4 SNRPGP7-201ENST00000469016 106 ntBASIC4.89□□□□□ -1.63
TRIM50Q86XT4 RN7SL691P-201ENST00000494487 301 ntBASIC4.89□□□□□ -1.63
TRIM50Q86XT4 RPL30P5-201ENST00000494923 336 ntBASIC4.89□□□□□ -1.63
TRIM50Q86XT4 AC078918.1-201ENST00000498515 228 ntBASIC4.89□□□□□ -1.63
TRIM50Q86XT4 RNU6-1114P-201ENST00000516022 107 ntBASIC4.89□□□□□ -1.63
TRIM50Q86XT4 AC024405.2-202ENST00000532731 184 ntBASIC4.89□□□□□ -1.63
TRIM50Q86XT4 ZNF192P1-203ENST00000565888 810 ntBASIC4.89□□□□□ -1.63
TRIM50Q86XT4 AL020997.2-201ENST00000602607 184 ntBASIC4.89□□□□□ -1.63
TRIM50Q86XT4 AC024581.2-201ENST00000619986 252 ntBASIC4.89□□□□□ -1.63
TRIM50Q86XT4 AC127459.3-201ENST00000624328 466 ntBASIC4.89□□□□□ -1.63
TRIM50Q86XT4 AL079305.1-201ENST00000623159 3008 ntBASIC4.89□□□□□ -1.63
TRIM50Q86XT4 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.89□□□□□ -1.63
TRIM50Q86XT4 MAPK10-303ENST00000641324 3959 ntBASIC4.89□□□□□ -1.63
TRIM50Q86XT4 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
TRIM50Q86XT4 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC4.89□□□□□ -1.63
TRIM50Q86XT4 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
TRIM50Q86XT4 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
TRIM50Q86XT4 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC4.89□□□□□ -1.63
TRIM50Q86XT4 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4.88□□□□□ -1.63
TRIM50Q86XT4 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC4.88□□□□□ -1.63
TRIM50Q86XT4 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC4.88□□□□□ -1.63
TRIM50Q86XT4 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
TRIM50Q86XT4 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
TRIM50Q86XT4 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
TRIM50Q86XT4 SNORD56.1-201ENST00000362913 68 ntBASIC4.88□□□□□ -1.63
TRIM50Q86XT4 Y_RNA.76-201ENST00000362931 109 ntBASIC4.88□□□□□ -1.63
TRIM50Q86XT4 RN7SKP280-201ENST00000364196 304 ntBASIC4.88□□□□□ -1.63
TRIM50Q86XT4 RNU1-140P-201ENST00000365040 165 ntBASIC4.88□□□□□ -1.63
TRIM50Q86XT4 RFX3-203ENST00000381984 364 ntTSL 3 BASIC4.88□□□□□ -1.63
TRIM50Q86XT4 SNORA29-201ENST00000384183 140 ntBASIC4.88□□□□□ -1.63
TRIM50Q86XT4 PCNPP3-201ENST00000393579 471 ntBASIC4.88□□□□□ -1.63
TRIM50Q86XT4 SNORA11F-201ENST00000408237 128 ntBASIC4.88□□□□□ -1.63
TRIM50Q86XT4 SNORD12B-201ENST00000410433 91 ntBASIC4.88□□□□□ -1.63
TRIM50Q86XT4 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC4.88□□□□□ -1.63
TRIM50Q86XT4 NDUFB4P6-201ENST00000436819 366 ntBASIC4.88□□□□□ -1.63
TRIM50Q86XT4 RPS26P2-201ENST00000440331 348 ntBASIC4.88□□□□□ -1.63
TRIM50Q86XT4 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
TRIM50Q86XT4 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
TRIM50Q86XT4 AC026784.1-201ENST00000507986 352 ntBASIC4.88□□□□□ -1.63
TRIM50Q86XT4 RNA5SP446-201ENST00000515955 82 ntBASIC4.88□□□□□ -1.63
TRIM50Q86XT4 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC4.88□□□□□ -1.63
TRIM50Q86XT4 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC4.88□□□□□ -1.63
TRIM50Q86XT4 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC4.88□□□□□ -1.63
TRIM50Q86XT4 U2.21-201ENST00000637295 81 ntBASIC4.88□□□□□ -1.63
TRIM50Q86XT4 AL353743.1-202ENST00000431724 1695 ntBASIC4.88□□□□□ -1.63
TRIM50Q86XT4 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
TRIM50Q86XT4 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
TRIM50Q86XT4 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.88□□□□□ -1.63
TRIM50Q86XT4 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
TRIM50Q86XT4 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
TRIM50Q86XT4 HSP90AA4P-202ENST00000506915 2228 ntBASIC4.88□□□□□ -1.63
TRIM50Q86XT4 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC4.88□□□□□ -1.63
TRIM50Q86XT4 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
TRIM50Q86XT4 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
TRIM50Q86XT4 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
TRIM50Q86XT4 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
TRIM50Q86XT4 MIR411-201ENST00000362239 96 ntBASIC4.87□□□□□ -1.63
TRIM50Q86XT4 Y_RNA.44-201ENST00000362676 108 ntBASIC4.87□□□□□ -1.63
TRIM50Q86XT4 Y_RNA.286-201ENST00000364813 102 ntBASIC4.87□□□□□ -1.63
TRIM50Q86XT4 RNU1-73P-201ENST00000383971 164 ntBASIC4.87□□□□□ -1.63
TRIM50Q86XT4 RNU6-217P-201ENST00000384164 104 ntBASIC4.87□□□□□ -1.63
TRIM50Q86XT4 RNU1-139P-201ENST00000391307 165 ntBASIC4.87□□□□□ -1.63
TRIM50Q86XT4 RPS26P8-201ENST00000393490 348 ntBASIC4.87□□□□□ -1.63
TRIM50Q86XT4 RNU4-30P-201ENST00000410245 143 ntBASIC4.87□□□□□ -1.63
TRIM50Q86XT4 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.87□□□□□ -1.63
TRIM50Q86XT4 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC4.87□□□□□ -1.63
TRIM50Q86XT4 RPL37P4-201ENST00000448908 268 ntBASIC4.87□□□□□ -1.63
TRIM50Q86XT4 SSXP4-201ENST00000451349 245 ntBASIC4.87□□□□□ -1.63
TRIM50Q86XT4 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms