Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 AL353705.4-201ENST00000449661 238 ntBASIC4.81□□□□□ -1.64
FOXR1Q6PIV2 snoU13.1-201ENST00000459157 104 ntBASIC4.81□□□□□ -1.64
FOXR1Q6PIV2 AF186996.7-201ENST00000492781 209 ntBASIC4.81□□□□□ -1.64
FOXR1Q6PIV2 RNU6-1114P-201ENST00000516022 107 ntBASIC4.81□□□□□ -1.64
FOXR1Q6PIV2 RNU6-191P-201ENST00000516295 94 ntBASIC4.81□□□□□ -1.64
FOXR1Q6PIV2 RNU7-121P-201ENST00000516604 62 ntBASIC4.81□□□□□ -1.64
FOXR1Q6PIV2 RN7SKP49-201ENST00000516675 260 ntBASIC4.81□□□□□ -1.64
FOXR1Q6PIV2 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC4.81□□□□□ -1.64
FOXR1Q6PIV2 ASB8-204ENST00000536071 568 ntTSL 4 BASIC4.81□□□□□ -1.64
FOXR1Q6PIV2 AP001880.2-201ENST00000538233 448 ntBASIC4.81□□□□□ -1.64
FOXR1Q6PIV2 AL391261.3-201ENST00000557194 520 ntBASIC4.81□□□□□ -1.64
FOXR1Q6PIV2 AC074140.1-201ENST00000621617 208 ntBASIC4.81□□□□□ -1.64
FOXR1Q6PIV2 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
FOXR1Q6PIV2 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.81□□□□□ -1.64
FOXR1Q6PIV2 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
FOXR1Q6PIV2 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC4.81□□□□□ -1.64
FOXR1Q6PIV2 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC4.81□□□□□ -1.64
FOXR1Q6PIV2 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
FOXR1Q6PIV2 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
FOXR1Q6PIV2 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC4.81□□□□□ -1.64
FOXR1Q6PIV2 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC4.8□□□□□ -1.64
FOXR1Q6PIV2 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC4.8□□□□□ -1.64
FOXR1Q6PIV2 AC126755.2-208ENST00000327792 462 ntBASIC4.8□□□□□ -1.64
FOXR1Q6PIV2 AC138969.1-213ENST00000331436 462 ntBASIC4.8□□□□□ -1.64
FOXR1Q6PIV2 RNU6-898P-201ENST00000365627 104 ntBASIC4.8□□□□□ -1.64
FOXR1Q6PIV2 RNA5SP332-201ENST00000391063 115 ntBASIC4.8□□□□□ -1.64
FOXR1Q6PIV2 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
FOXR1Q6PIV2 HLA-N-201ENST00000437516 135 ntBASIC4.8□□□□□ -1.64
FOXR1Q6PIV2 RPS29P9-201ENST00000440360 171 ntBASIC4.8□□□□□ -1.64
FOXR1Q6PIV2 AL359073.1-201ENST00000448036 403 ntBASIC4.8□□□□□ -1.64
FOXR1Q6PIV2 AL451050.1-201ENST00000450126 415 ntBASIC4.8□□□□□ -1.64
FOXR1Q6PIV2 AC009963.2-201ENST00000453431 138 ntBASIC4.8□□□□□ -1.64
FOXR1Q6PIV2 snoU109.2-201ENST00000459316 135 ntBASIC4.8□□□□□ -1.64
FOXR1Q6PIV2 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC4.8□□□□□ -1.64
FOXR1Q6PIV2 AC008694.2-201ENST00000517591 306 ntBASIC4.8□□□□□ -1.64
FOXR1Q6PIV2 MIR4679-2-201ENST00000578358 77 ntBASIC4.8□□□□□ -1.64
FOXR1Q6PIV2 MIR5695-201ENST00000579717 85 ntBASIC4.8□□□□□ -1.64
FOXR1Q6PIV2 MIR3613-201ENST00000579844 87 ntBASIC4.8□□□□□ -1.64
FOXR1Q6PIV2 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC4.8□□□□□ -1.64
FOXR1Q6PIV2 AC005520.5-201ENST00000613926 164 ntBASIC4.8□□□□□ -1.64
FOXR1Q6PIV2 AC005296.1-201ENST00000616145 209 ntBASIC4.8□□□□□ -1.64
FOXR1Q6PIV2 MIR4275-201ENST00000636486 87 ntBASIC4.8□□□□□ -1.64
FOXR1Q6PIV2 AC009541.1-201ENST00000438279 2662 ntBASIC4.8□□□□□ -1.64
FOXR1Q6PIV2 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
FOXR1Q6PIV2 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC4.8□□□□□ -1.64
FOXR1Q6PIV2 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
FOXR1Q6PIV2 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
FOXR1Q6PIV2 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
FOXR1Q6PIV2 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC4.79□□□□□ -1.64
FOXR1Q6PIV2 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
FOXR1Q6PIV2 AP000756.2-201ENST00000624168 2567 ntBASIC4.79□□□□□ -1.64
FOXR1Q6PIV2 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC4.79□□□□□ -1.64
FOXR1Q6PIV2 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
FOXR1Q6PIV2 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC4.79□□□□□ -1.64
FOXR1Q6PIV2 RNU6-741P-201ENST00000383889 107 ntBASIC4.79□□□□□ -1.64
FOXR1Q6PIV2 RNU6-968P-201ENST00000384076 107 ntBASIC4.79□□□□□ -1.64
FOXR1Q6PIV2 Y_RNA.525-201ENST00000384570 113 ntBASIC4.79□□□□□ -1.64
FOXR1Q6PIV2 MIR10B-201ENST00000385011 110 ntBASIC4.79□□□□□ -1.64
FOXR1Q6PIV2 BTF3L4P2-201ENST00000392798 346 ntBASIC4.79□□□□□ -1.64
FOXR1Q6PIV2 RNA5SP113-201ENST00000410486 84 ntBASIC4.79□□□□□ -1.64
FOXR1Q6PIV2 AL513331.1-201ENST00000411908 397 ntBASIC4.79□□□□□ -1.64
FOXR1Q6PIV2 RPL30P13-201ENST00000418873 348 ntBASIC4.79□□□□□ -1.64
FOXR1Q6PIV2 EBAG9P1-201ENST00000418955 543 ntBASIC4.79□□□□□ -1.64
FOXR1Q6PIV2 AC091390.3-201ENST00000426478 338 ntBASIC4.79□□□□□ -1.64
FOXR1Q6PIV2 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC4.79□□□□□ -1.64
FOXR1Q6PIV2 AL627311.1-201ENST00000431514 115 ntBASIC4.79□□□□□ -1.64
FOXR1Q6PIV2 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC4.79□□□□□ -1.64
FOXR1Q6PIV2 RPL10P17-201ENST00000453852 316 ntBASIC4.79□□□□□ -1.64
FOXR1Q6PIV2 RN7SKP276-201ENST00000516242 268 ntBASIC4.79□□□□□ -1.64
FOXR1Q6PIV2 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC4.79□□□□□ -1.64
FOXR1Q6PIV2 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC4.79□□□□□ -1.64
FOXR1Q6PIV2 MIR4284-201ENST00000578924 81 ntBASIC4.79□□□□□ -1.64
FOXR1Q6PIV2 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC4.79□□□□□ -1.64
FOXR1Q6PIV2 AC107294.1-201ENST00000609524 467 ntBASIC4.79□□□□□ -1.64
FOXR1Q6PIV2 RMST_6.1-201ENST00000611980 203 ntBASIC4.79□□□□□ -1.64
FOXR1Q6PIV2 MIR6780A-201ENST00000615089 68 ntBASIC4.79□□□□□ -1.64
FOXR1Q6PIV2 AC019206.1-201ENST00000621938 425 ntBASIC4.79□□□□□ -1.64
FOXR1Q6PIV2 AL353748.2-201ENST00000622148 471 ntBASIC4.79□□□□□ -1.64
FOXR1Q6PIV2 U4.7-201ENST00000638126 106 ntBASIC4.79□□□□□ -1.64
FOXR1Q6PIV2 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4.79□□□□□ -1.64
FOXR1Q6PIV2 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
FOXR1Q6PIV2 ST7-212ENST00000422922 1887 ntTSL 5 BASIC4.79□□□□□ -1.64
FOXR1Q6PIV2 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
FOXR1Q6PIV2 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
FOXR1Q6PIV2 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
FOXR1Q6PIV2 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC4.78□□□□□ -1.64
FOXR1Q6PIV2 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
FOXR1Q6PIV2 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
FOXR1Q6PIV2 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
FOXR1Q6PIV2 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC4.78□□□□□ -1.64
FOXR1Q6PIV2 RNU6-1056P-201ENST00000383996 107 ntBASIC4.78□□□□□ -1.64
FOXR1Q6PIV2 RNU6-213P-201ENST00000384051 104 ntBASIC4.78□□□□□ -1.64
FOXR1Q6PIV2 RNU6-281P-201ENST00000384212 103 ntBASIC4.78□□□□□ -1.64
FOXR1Q6PIV2 MIR329-1-201ENST00000385028 80 ntBASIC4.78□□□□□ -1.64
FOXR1Q6PIV2 RNA5SP104-201ENST00000410989 118 ntBASIC4.78□□□□□ -1.64
FOXR1Q6PIV2 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC4.78□□□□□ -1.64
FOXR1Q6PIV2 MTATP6P4-201ENST00000427725 675 ntBASIC4.78□□□□□ -1.64
FOXR1Q6PIV2 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC4.78□□□□□ -1.64
FOXR1Q6PIV2 TEX41-209ENST00000451478 452 ntTSL 2 BASIC4.78□□□□□ -1.64
FOXR1Q6PIV2 RPL23AP49-201ENST00000492925 468 ntBASIC4.78□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 106.4 ms