Protein–RNA interactions for Protein: Q66K89

E4F1, Transcription factor E4F1, humanhuman

Predicted RBP Predictions only

Length 784 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
E4F1Q66K89 MIR607-201ENST00000385241 96 ntBASIC4.05□□□□□ -1.76
E4F1Q66K89 AL591034.2-201ENST00000402839 359 ntBASIC4.05□□□□□ -1.76
E4F1Q66K89 AL138885.1-201ENST00000405921 675 ntBASIC4.05□□□□□ -1.76
E4F1Q66K89 AC114482.1-201ENST00000418010 247 ntBASIC4.05□□□□□ -1.76
E4F1Q66K89 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC4.05□□□□□ -1.76
E4F1Q66K89 FTH1P6-201ENST00000430768 320 ntBASIC4.05□□□□□ -1.76
E4F1Q66K89 SNRPEP9-201ENST00000436794 238 ntBASIC4.05□□□□□ -1.76
E4F1Q66K89 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC4.05□□□□□ -1.76
E4F1Q66K89 CHEK2P4-201ENST00000450340 246 ntBASIC4.05□□□□□ -1.76
E4F1Q66K89 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
E4F1Q66K89 RPL21P11-201ENST00000461458 483 ntBASIC4.05□□□□□ -1.76
E4F1Q66K89 AC110768.1-201ENST00000509222 400 ntBASIC4.05□□□□□ -1.76
E4F1Q66K89 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC4.05□□□□□ -1.76
E4F1Q66K89 AC022695.1-201ENST00000522089 237 ntBASIC4.05□□□□□ -1.76
E4F1Q66K89 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC4.05□□□□□ -1.76
E4F1Q66K89 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC4.05□□□□□ -1.76
E4F1Q66K89 AC011602.1-201ENST00000546484 331 ntBASIC4.05□□□□□ -1.76
E4F1Q66K89 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC4.05□□□□□ -1.76
E4F1Q66K89 IGKV2OR2-8-201ENST00000558710 300 ntBASIC4.05□□□□□ -1.76
E4F1Q66K89 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC4.05□□□□□ -1.76
E4F1Q66K89 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC4.05□□□□□ -1.76
E4F1Q66K89 MIR1244-1-201ENST00000612829 85 ntBASIC4.05□□□□□ -1.76
E4F1Q66K89 MIR6716-201ENST00000613413 80 ntBASIC4.05□□□□□ -1.76
E4F1Q66K89 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC4.05□□□□□ -1.76
E4F1Q66K89 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC4.05□□□□□ -1.76
E4F1Q66K89 AC099506.2-201ENST00000623074 221 ntBASIC4.05□□□□□ -1.76
E4F1Q66K89 MIR1244-3-201ENST00000635744 85 ntBASIC4.05□□□□□ -1.76
E4F1Q66K89 MIR4272-201ENST00000635924 64 ntBASIC4.05□□□□□ -1.76
E4F1Q66K89 MIR1244-2-201ENST00000636449 85 ntBASIC4.05□□□□□ -1.76
E4F1Q66K89 MIR1244-4-202ENST00000636813 85 ntBASIC4.05□□□□□ -1.76
E4F1Q66K89 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC4.05□□□□□ -1.76
E4F1Q66K89 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
E4F1Q66K89 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
E4F1Q66K89 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
E4F1Q66K89 AC058791.1-201ENST00000608412 3198 ntBASIC4.04□□□□□ -1.76
E4F1Q66K89 USP33-201ENST00000357428 4155 ntTSL 5 BASIC4.04□□□□□ -1.76
E4F1Q66K89 AL359693.1-201ENST00000614959 2407 ntBASIC4.04□□□□□ -1.76
E4F1Q66K89 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
E4F1Q66K89 RNU6-428P-201ENST00000362942 107 ntBASIC4.04□□□□□ -1.76
E4F1Q66K89 RNU4-42P-201ENST00000364738 142 ntBASIC4.04□□□□□ -1.76
E4F1Q66K89 RNU6-213P-201ENST00000384051 104 ntBASIC4.04□□□□□ -1.76
E4F1Q66K89 RNU1-13P-201ENST00000384499 162 ntBASIC4.04□□□□□ -1.76
E4F1Q66K89 MIR625-201ENST00000385047 85 ntBASIC4.04□□□□□ -1.76
E4F1Q66K89 AL117339.3-201ENST00000418733 162 ntBASIC4.04□□□□□ -1.76
E4F1Q66K89 RPL7P2-201ENST00000427639 268 ntBASIC4.04□□□□□ -1.76
E4F1Q66K89 MTND3P9-201ENST00000429526 346 ntBASIC4.04□□□□□ -1.76
E4F1Q66K89 AC092423.1-201ENST00000430165 186 ntBASIC4.04□□□□□ -1.76
E4F1Q66K89 VDAC1P3-201ENST00000434069 851 ntBASIC4.04□□□□□ -1.76
E4F1Q66K89 OR4C10P-201ENST00000434991 931 ntBASIC4.04□□□□□ -1.76
E4F1Q66K89 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC4.04□□□□□ -1.76
E4F1Q66K89 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC4.04□□□□□ -1.76
E4F1Q66K89 AC010655.3-201ENST00000478818 450 ntBASIC4.04□□□□□ -1.76
E4F1Q66K89 SLC25A15P5-201ENST00000508033 253 ntBASIC4.04□□□□□ -1.76
E4F1Q66K89 AP005902.1-201ENST00000521358 186 ntBASIC4.04□□□□□ -1.76
E4F1Q66K89 AP006245.1-201ENST00000522549 120 ntBASIC4.04□□□□□ -1.76
E4F1Q66K89 AC131281.1-201ENST00000522984 164 ntBASIC4.04□□□□□ -1.76
E4F1Q66K89 AC022616.4-201ENST00000522985 181 ntBASIC4.04□□□□□ -1.76
E4F1Q66K89 AC004584.2-201ENST00000570407 410 ntBASIC4.04□□□□□ -1.76
E4F1Q66K89 AC006600.1-201ENST00000572529 153 ntBASIC4.04□□□□□ -1.76
E4F1Q66K89 AC136601.2-201ENST00000604356 474 ntBASIC4.04□□□□□ -1.76
E4F1Q66K89 UBE2Q2P6-201ENST00000612666 153 ntBASIC4.04□□□□□ -1.76
E4F1Q66K89 AL138825.1-201ENST00000618587 192 ntBASIC4.04□□□□□ -1.76
E4F1Q66K89 CCT7-217ENST00000626868 249 ntTSL 5 BASIC4.04□□□□□ -1.76
E4F1Q66K89 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC4.04□□□□□ -1.76
E4F1Q66K89 AP001486.2-201ENST00000561652 5113 ntBASIC4.04□□□□□ -1.76
E4F1Q66K89 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
E4F1Q66K89 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
E4F1Q66K89 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
E4F1Q66K89 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
E4F1Q66K89 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC4.03□□□□□ -1.76
E4F1Q66K89 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
E4F1Q66K89 Y_RNA.152-201ENST00000363578 100 ntBASIC4.03□□□□□ -1.76
E4F1Q66K89 RNA5SP167-201ENST00000365461 116 ntBASIC4.03□□□□□ -1.76
E4F1Q66K89 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC4.03□□□□□ -1.76
E4F1Q66K89 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC4.03□□□□□ -1.76
E4F1Q66K89 Y_RNA.512-201ENST00000384518 102 ntBASIC4.03□□□□□ -1.76
E4F1Q66K89 RNA5SP239-201ENST00000410218 129 ntBASIC4.03□□□□□ -1.76
E4F1Q66K89 RN7SKP177-201ENST00000410567 355 ntBASIC4.03□□□□□ -1.76
E4F1Q66K89 Y_RNA.618-201ENST00000410949 107 ntBASIC4.03□□□□□ -1.76
E4F1Q66K89 RPL17P36-201ENST00000420302 549 ntBASIC4.03□□□□□ -1.76
E4F1Q66K89 AC098614.2-201ENST00000426040 255 ntBASIC4.03□□□□□ -1.76
E4F1Q66K89 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC4.03□□□□□ -1.76
E4F1Q66K89 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC4.03□□□□□ -1.76
E4F1Q66K89 RN7SKP122-201ENST00000515923 296 ntBASIC4.03□□□□□ -1.76
E4F1Q66K89 RNU7-4P-201ENST00000516961 62 ntBASIC4.03□□□□□ -1.76
E4F1Q66K89 AC109479.2-201ENST00000517842 174 ntBASIC4.03□□□□□ -1.76
E4F1Q66K89 AP000889.1-201ENST00000530968 660 ntBASIC4.03□□□□□ -1.76
E4F1Q66K89 AC008011.1-201ENST00000545989 227 ntBASIC4.03□□□□□ -1.76
E4F1Q66K89 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC4.03□□□□□ -1.76
E4F1Q66K89 AC120057.2-201ENST00000571520 271 ntBASIC4.03□□□□□ -1.76
E4F1Q66K89 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC4.03□□□□□ -1.76
E4F1Q66K89 MIR3668-201ENST00000582138 75 ntBASIC4.03□□□□□ -1.76
E4F1Q66K89 MIR5188-201ENST00000583467 113 ntBASIC4.03□□□□□ -1.76
E4F1Q66K89 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC4.03□□□□□ -1.76
E4F1Q66K89 AC100812.1-201ENST00000607622 580 ntBASIC4.03□□□□□ -1.76
E4F1Q66K89 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC4.03□□□□□ -1.76
E4F1Q66K89 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
E4F1Q66K89 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC4.03□□□□□ -1.76
E4F1Q66K89 AL133412.1-201ENST00000380194 2992 ntBASIC4.03□□□□□ -1.76
E4F1Q66K89 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 96.8 ms