Protein–RNA interactions for Protein: Q5SRH9

TTC39A, Tetratricopeptide repeat protein 39A, humanhuman

Predictions only

Length 613 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39AQ5SRH9 Y_RNA.373-201ENST00000365600 103 ntBASIC3.37□□□□□ -1.87
TTC39AQ5SRH9 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
TTC39AQ5SRH9 CISD1P1-201ENST00000393907 327 ntBASIC3.37□□□□□ -1.87
TTC39AQ5SRH9 AL139397.2-201ENST00000404529 772 ntBASIC3.37□□□□□ -1.87
TTC39AQ5SRH9 RNA5SP111-201ENST00000411386 101 ntBASIC3.37□□□□□ -1.87
TTC39AQ5SRH9 PDCL2P1-201ENST00000419302 352 ntBASIC3.37□□□□□ -1.87
TTC39AQ5SRH9 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC3.37□□□□□ -1.87
TTC39AQ5SRH9 RPL7P12-201ENST00000446719 750 ntBASIC3.37□□□□□ -1.87
TTC39AQ5SRH9 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC3.37□□□□□ -1.87
TTC39AQ5SRH9 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC3.37□□□□□ -1.87
TTC39AQ5SRH9 TTC39CP1-201ENST00000512513 755 ntBASIC3.37□□□□□ -1.87
TTC39AQ5SRH9 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC3.37□□□□□ -1.87
TTC39AQ5SRH9 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.37□□□□□ -1.87
TTC39AQ5SRH9 MTND4P7-201ENST00000523876 130 ntBASIC3.37□□□□□ -1.87
TTC39AQ5SRH9 MDM2-233ENST00000545204 398 ntTSL 5 BASIC3.37□□□□□ -1.87
TTC39AQ5SRH9 AL117336.2-201ENST00000602435 335 ntBASIC3.37□□□□□ -1.87
TTC39AQ5SRH9 AC104763.2-201ENST00000604179 382 ntBASIC3.37□□□□□ -1.87
TTC39AQ5SRH9 MIR6076-201ENST00000617521 113 ntBASIC3.37□□□□□ -1.87
TTC39AQ5SRH9 AC009248.2-201ENST00000619826 254 ntBASIC3.37□□□□□ -1.87
TTC39AQ5SRH9 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
TTC39AQ5SRH9 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
TTC39AQ5SRH9 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC3.37□□□□□ -1.87
TTC39AQ5SRH9 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
TTC39AQ5SRH9 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
TTC39AQ5SRH9 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC3.37□□□□□ -1.87
TTC39AQ5SRH9 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
TTC39AQ5SRH9 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
TTC39AQ5SRH9 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC3.36□□□□□ -1.87
TTC39AQ5SRH9 Y_RNA.142-201ENST00000363491 102 ntBASIC3.36□□□□□ -1.87
TTC39AQ5SRH9 RNU6-522P-201ENST00000364497 107 ntBASIC3.36□□□□□ -1.87
TTC39AQ5SRH9 Y_RNA.378-201ENST00000365652 113 ntBASIC3.36□□□□□ -1.87
TTC39AQ5SRH9 MIR514A1-201ENST00000385133 98 ntBASIC3.36□□□□□ -1.87
TTC39AQ5SRH9 AL139039.1-201ENST00000401900 692 ntBASIC3.36□□□□□ -1.87
TTC39AQ5SRH9 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.36□□□□□ -1.87
TTC39AQ5SRH9 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC3.36□□□□□ -1.87
TTC39AQ5SRH9 AL451054.2-201ENST00000420896 202 ntBASIC3.36□□□□□ -1.87
TTC39AQ5SRH9 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC3.36□□□□□ -1.87
TTC39AQ5SRH9 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.36□□□□□ -1.87
TTC39AQ5SRH9 AC009969.1-201ENST00000438726 172 ntBASIC3.36□□□□□ -1.87
TTC39AQ5SRH9 TRAPPC2P3-201ENST00000443200 321 ntBASIC3.36□□□□□ -1.87
TTC39AQ5SRH9 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC3.36□□□□□ -1.87
TTC39AQ5SRH9 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC3.36□□□□□ -1.87
TTC39AQ5SRH9 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC3.36□□□□□ -1.87
TTC39AQ5SRH9 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC3.36□□□□□ -1.87
TTC39AQ5SRH9 Y_RNA.665-201ENST00000516177 98 ntBASIC3.36□□□□□ -1.87
TTC39AQ5SRH9 RNU6-685P-201ENST00000517088 95 ntBASIC3.36□□□□□ -1.87
TTC39AQ5SRH9 RNU6-1314P-201ENST00000517139 104 ntBASIC3.36□□□□□ -1.87
TTC39AQ5SRH9 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC3.36□□□□□ -1.87
TTC39AQ5SRH9 RPL7P20-201ENST00000520308 745 ntBASIC3.36□□□□□ -1.87
TTC39AQ5SRH9 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC3.36□□□□□ -1.87
TTC39AQ5SRH9 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC3.36□□□□□ -1.87
TTC39AQ5SRH9 BNIP3P6-201ENST00000549284 499 ntBASIC3.36□□□□□ -1.87
TTC39AQ5SRH9 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC3.36□□□□□ -1.87
TTC39AQ5SRH9 TRAV37-201ENST00000553906 342 ntBASIC3.36□□□□□ -1.87
TTC39AQ5SRH9 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC3.36□□□□□ -1.87
TTC39AQ5SRH9 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC3.36□□□□□ -1.87
TTC39AQ5SRH9 MIR4319-201ENST00000577285 85 ntBASIC3.36□□□□□ -1.87
TTC39AQ5SRH9 AC009570.1-201ENST00000609599 745 ntBASIC3.36□□□□□ -1.87
TTC39AQ5SRH9 DUSP12P1-201ENST00000612874 516 ntBASIC3.36□□□□□ -1.87
TTC39AQ5SRH9 MIR6852-201ENST00000621699 66 ntBASIC3.36□□□□□ -1.87
TTC39AQ5SRH9 AC112487.2-201ENST00000637950 304 ntBASIC3.36□□□□□ -1.87
TTC39AQ5SRH9 AC091564.4-201ENST00000533934 2194 ntBASIC3.36□□□□□ -1.87
TTC39AQ5SRH9 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
TTC39AQ5SRH9 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.35□□□□□ -1.87
TTC39AQ5SRH9 MIR26A1-201ENST00000362205 77 ntBASIC3.35□□□□□ -1.87
TTC39AQ5SRH9 Y_RNA.61-201ENST00000362835 102 ntBASIC3.35□□□□□ -1.87
TTC39AQ5SRH9 Y_RNA.263-201ENST00000364659 114 ntBASIC3.35□□□□□ -1.87
TTC39AQ5SRH9 SNORA51.4-201ENST00000364993 124 ntBASIC3.35□□□□□ -1.87
TTC39AQ5SRH9 SNORD81.2-201ENST00000365153 76 ntBASIC3.35□□□□□ -1.87
TTC39AQ5SRH9 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC3.35□□□□□ -1.87
TTC39AQ5SRH9 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
TTC39AQ5SRH9 RNU4-26P-201ENST00000410270 107 ntBASIC3.35□□□□□ -1.87
TTC39AQ5SRH9 RNU4-46P-201ENST00000410818 138 ntBASIC3.35□□□□□ -1.87
TTC39AQ5SRH9 NDUFB4P5-201ENST00000415445 361 ntBASIC3.35□□□□□ -1.87
TTC39AQ5SRH9 BTF3L4P3-201ENST00000418879 476 ntBASIC3.35□□□□□ -1.87
TTC39AQ5SRH9 AC093019.1-201ENST00000443135 252 ntBASIC3.35□□□□□ -1.87
TTC39AQ5SRH9 AC007547.1-201ENST00000462177 490 ntBASIC3.35□□□□□ -1.87
TTC39AQ5SRH9 AC104472.2-201ENST00000469035 601 ntBASIC3.35□□□□□ -1.87
TTC39AQ5SRH9 AC083904.1-201ENST00000487828 231 ntBASIC3.35□□□□□ -1.87
TTC39AQ5SRH9 AC092185.1-201ENST00000491371 97 ntBASIC3.35□□□□□ -1.87
TTC39AQ5SRH9 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC3.35□□□□□ -1.87
TTC39AQ5SRH9 SNORA31.3-201ENST00000516029 96 ntBASIC3.35□□□□□ -1.87
TTC39AQ5SRH9 RNU6-677P-201ENST00000516914 101 ntBASIC3.35□□□□□ -1.87
TTC39AQ5SRH9 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC3.35□□□□□ -1.87
TTC39AQ5SRH9 AL137161.1-201ENST00000532231 390 ntBASIC3.35□□□□□ -1.87
TTC39AQ5SRH9 DNAJC8P1-201ENST00000554535 372 ntBASIC3.35□□□□□ -1.87
TTC39AQ5SRH9 SCOCP1-201ENST00000554676 349 ntBASIC3.35□□□□□ -1.87
TTC39AQ5SRH9 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC3.35□□□□□ -1.87
TTC39AQ5SRH9 AC005261.5-201ENST00000596280 355 ntBASIC3.35□□□□□ -1.87
TTC39AQ5SRH9 AC093913.1-201ENST00000614178 329 ntBASIC3.35□□□□□ -1.87
TTC39AQ5SRH9 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC3.35□□□□□ -1.87
TTC39AQ5SRH9 uc_338.11-201ENST00000619132 160 ntBASIC3.35□□□□□ -1.87
TTC39AQ5SRH9 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC3.35□□□□□ -1.87
TTC39AQ5SRH9 AL137003.2-201ENST00000606924 2538 ntBASIC3.35□□□□□ -1.87
TTC39AQ5SRH9 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC3.34□□□□□ -1.87
TTC39AQ5SRH9 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC3.34□□□□□ -1.87
TTC39AQ5SRH9 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
TTC39AQ5SRH9 DEFB108F-201ENST00000344638 222 ntBASIC3.34□□□□□ -1.87
TTC39AQ5SRH9 Y_RNA.529-201ENST00000384586 119 ntBASIC3.34□□□□□ -1.87
TTC39AQ5SRH9 AL360182.1-201ENST00000397433 468 ntBASIC3.34□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms