Protein–RNA interactions for Protein: Q502W7

CCDC38, Coiled-coil domain-containing protein 38, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38Q502W7 SCARNA4-202ENST00000625402 129 ntBASIC3.29□□□□□ -1.88
CCDC38Q502W7 AC108206.1-201ENST00000570186 4159 ntBASIC3.29□□□□□ -1.88
CCDC38Q502W7 OR4G1P-203ENST00000641984 1631 ntBASIC3.29□□□□□ -1.88
CCDC38Q502W7 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC3.28□□□□□ -1.88
CCDC38Q502W7 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC3.28□□□□□ -1.88
CCDC38Q502W7 Y_RNA.324-201ENST00000365165 102 ntBASIC3.28□□□□□ -1.88
CCDC38Q502W7 RNU6-19P-201ENST00000384718 107 ntBASIC3.28□□□□□ -1.88
CCDC38Q502W7 SNORA46-201ENST00000384762 135 ntBASIC3.28□□□□□ -1.88
CCDC38Q502W7 MIR34B-201ENST00000385076 84 ntBASIC3.28□□□□□ -1.88
CCDC38Q502W7 AC245054.2-201ENST00000415639 319 ntBASIC3.28□□□□□ -1.88
CCDC38Q502W7 PTGES3P4-201ENST00000426243 356 ntBASIC3.28□□□□□ -1.88
CCDC38Q502W7 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.28□□□□□ -1.88
CCDC38Q502W7 HIGD1AP2-201ENST00000446367 280 ntBASIC3.28□□□□□ -1.88
CCDC38Q502W7 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC3.28□□□□□ -1.88
CCDC38Q502W7 snoU109.2-201ENST00000459316 135 ntBASIC3.28□□□□□ -1.88
CCDC38Q502W7 DYNLL1P5-201ENST00000467158 270 ntBASIC3.28□□□□□ -1.88
CCDC38Q502W7 RPL21P99-201ENST00000480369 423 ntBASIC3.28□□□□□ -1.88
CCDC38Q502W7 RPL21P93-201ENST00000480465 489 ntBASIC3.28□□□□□ -1.88
CCDC38Q502W7 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC3.28□□□□□ -1.88
CCDC38Q502W7 MRPS36P2-201ENST00000512569 299 ntBASIC3.28□□□□□ -1.88
CCDC38Q502W7 MTND4LP26-201ENST00000518144 282 ntBASIC3.28□□□□□ -1.88
CCDC38Q502W7 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC3.28□□□□□ -1.88
CCDC38Q502W7 AP004607.1-201ENST00000524456 203 ntBASIC3.28□□□□□ -1.88
CCDC38Q502W7 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC3.28□□□□□ -1.88
CCDC38Q502W7 AC090115.3-201ENST00000553218 849 ntBASIC3.28□□□□□ -1.88
CCDC38Q502W7 OR11H5P-201ENST00000554039 926 ntBASIC3.28□□□□□ -1.88
CCDC38Q502W7 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC3.28□□□□□ -1.88
CCDC38Q502W7 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.28□□□□□ -1.88
CCDC38Q502W7 AC011471.1-201ENST00000585766 187 ntBASIC3.28□□□□□ -1.88
CCDC38Q502W7 AC020895.1-201ENST00000595362 272 ntBASIC3.28□□□□□ -1.88
CCDC38Q502W7 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC3.28□□□□□ -1.88
CCDC38Q502W7 USP12-203ENST00000620323 349 ntTSL 3 BASIC3.28□□□□□ -1.88
CCDC38Q502W7 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC3.28□□□□□ -1.88
CCDC38Q502W7 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC3.28□□□□□ -1.88
CCDC38Q502W7 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC3.28□□□□□ -1.88
CCDC38Q502W7 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.89
CCDC38Q502W7 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC3.28□□□□□ -1.89
CCDC38Q502W7 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.27□□□□□ -1.89
CCDC38Q502W7 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
CCDC38Q502W7 Y_RNA.231-201ENST00000364358 102 ntBASIC3.27□□□□□ -1.89
CCDC38Q502W7 RNU6-534P-201ENST00000364877 106 ntBASIC3.27□□□□□ -1.89
CCDC38Q502W7 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC3.27□□□□□ -1.89
CCDC38Q502W7 RNU6-877P-201ENST00000383868 107 ntBASIC3.27□□□□□ -1.89
CCDC38Q502W7 AL512633.1-201ENST00000399931 655 ntBASIC3.27□□□□□ -1.89
CCDC38Q502W7 MIR1277-201ENST00000408536 78 ntBASIC3.27□□□□□ -1.89
CCDC38Q502W7 MORN2-203ENST00000409131 544 ntTSL 5 BASIC3.27□□□□□ -1.89
CCDC38Q502W7 OR9R1P-201ENST00000412200 877 ntBASIC3.27□□□□□ -1.89
CCDC38Q502W7 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC3.27□□□□□ -1.89
CCDC38Q502W7 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC3.27□□□□□ -1.89
CCDC38Q502W7 CALM1P1-201ENST00000442082 433 ntBASIC3.27□□□□□ -1.89
CCDC38Q502W7 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC3.27□□□□□ -1.89
CCDC38Q502W7 RPL39P40-201ENST00000445481 146 ntBASIC3.27□□□□□ -1.89
CCDC38Q502W7 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC3.27□□□□□ -1.89
CCDC38Q502W7 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC3.27□□□□□ -1.89
CCDC38Q502W7 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC3.27□□□□□ -1.89
CCDC38Q502W7 SEM1P1-201ENST00000506694 209 ntBASIC3.27□□□□□ -1.89
CCDC38Q502W7 Y_RNA.687-201ENST00000516558 91 ntBASIC3.27□□□□□ -1.89
CCDC38Q502W7 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.27□□□□□ -1.89
CCDC38Q502W7 AC010525.2-201ENST00000590920 195 ntBASIC3.27□□□□□ -1.89
CCDC38Q502W7 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC3.27□□□□□ -1.89
CCDC38Q502W7 AC007179.3-201ENST00000604976 235 ntBASIC3.27□□□□□ -1.89
CCDC38Q502W7 AC107871.2-201ENST00000612894 502 ntBASIC3.27□□□□□ -1.89
CCDC38Q502W7 AC026585.1-201ENST00000619582 524 ntBASIC3.27□□□□□ -1.89
CCDC38Q502W7 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC3.27□□□□□ -1.89
CCDC38Q502W7 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
CCDC38Q502W7 AK9-203ENST00000368948 2478 ntTSL 5 BASIC3.27□□□□□ -1.89
CCDC38Q502W7 RNU1-33P-201ENST00000364249 162 ntBASIC3.26□□□□□ -1.89
CCDC38Q502W7 Y_RNA.295-201ENST00000364918 102 ntBASIC3.26□□□□□ -1.89
CCDC38Q502W7 SNORD21-201ENST00000383953 95 ntBASIC3.26□□□□□ -1.89
CCDC38Q502W7 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
CCDC38Q502W7 CD3D-202ENST00000392884 476 ntTSL 2 BASIC3.26□□□□□ -1.89
CCDC38Q502W7 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC3.26□□□□□ -1.89
CCDC38Q502W7 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC3.26□□□□□ -1.89
CCDC38Q502W7 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC3.26□□□□□ -1.89
CCDC38Q502W7 AL159987.2-201ENST00000432754 307 ntBASIC3.26□□□□□ -1.89
CCDC38Q502W7 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC3.26□□□□□ -1.89
CCDC38Q502W7 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC3.26□□□□□ -1.89
CCDC38Q502W7 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC3.26□□□□□ -1.89
CCDC38Q502W7 RPS3AP12-201ENST00000443616 753 ntBASIC3.26□□□□□ -1.89
CCDC38Q502W7 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC3.26□□□□□ -1.89
CCDC38Q502W7 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC3.26□□□□□ -1.89
CCDC38Q502W7 AC092989.1-201ENST00000481235 277 ntBASIC3.26□□□□□ -1.89
CCDC38Q502W7 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC3.26□□□□□ -1.89
CCDC38Q502W7 Y_RNA.654-201ENST00000497848 106 ntBASIC3.26□□□□□ -1.89
CCDC38Q502W7 AC074250.1-201ENST00000511117 192 ntBASIC3.26□□□□□ -1.89
CCDC38Q502W7 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC3.26□□□□□ -1.89
CCDC38Q502W7 ACA59.2-201ENST00000517061 156 ntBASIC3.26□□□□□ -1.89
CCDC38Q502W7 SNORA25.17-201ENST00000517184 124 ntBASIC3.26□□□□□ -1.89
CCDC38Q502W7 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC3.26□□□□□ -1.89
CCDC38Q502W7 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC3.26□□□□□ -1.89
CCDC38Q502W7 AC011611.1-201ENST00000552179 197 ntBASIC3.26□□□□□ -1.89
CCDC38Q502W7 AL118558.2-201ENST00000556294 238 ntBASIC3.26□□□□□ -1.89
CCDC38Q502W7 AC010620.2-201ENST00000600135 313 ntBASIC3.26□□□□□ -1.89
CCDC38Q502W7 AC010378.1-201ENST00000619270 362 ntBASIC3.26□□□□□ -1.89
CCDC38Q502W7 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.26□□□□□ -1.89
CCDC38Q502W7 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
CCDC38Q502W7 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
CCDC38Q502W7 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC3.26□□□□□ -1.89
CCDC38Q502W7 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
CCDC38Q502W7 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC3.25□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 252.3 ms