Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 AC096649.2-201ENST00000416186 393 ntBASIC4.16□□□□□ -1.74
CCDC144BQ3MJ40 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
CCDC144BQ3MJ40 BX510359.1-201ENST00000456973 237 ntBASIC4.16□□□□□ -1.74
CCDC144BQ3MJ40 RPL23AP14-201ENST00000468281 468 ntBASIC4.16□□□□□ -1.74
CCDC144BQ3MJ40 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC4.16□□□□□ -1.74
CCDC144BQ3MJ40 RNU6-377P-201ENST00000515965 102 ntBASIC4.16□□□□□ -1.74
CCDC144BQ3MJ40 Y_RNA.682-201ENST00000516457 100 ntBASIC4.16□□□□□ -1.74
CCDC144BQ3MJ40 AC105029.1-201ENST00000520250 669 ntBASIC4.16□□□□□ -1.74
CCDC144BQ3MJ40 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC4.16□□□□□ -1.74
CCDC144BQ3MJ40 AP005597.4-201ENST00000526762 229 ntBASIC4.16□□□□□ -1.74
CCDC144BQ3MJ40 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC4.16□□□□□ -1.74
CCDC144BQ3MJ40 KLKP1-201ENST00000595979 403 ntBASIC4.16□□□□□ -1.74
CCDC144BQ3MJ40 AC123912.5-201ENST00000605470 343 ntBASIC4.16□□□□□ -1.74
CCDC144BQ3MJ40 RNVU1-4-201ENST00000612985 164 ntBASIC4.16□□□□□ -1.74
CCDC144BQ3MJ40 RDM1-219ENST00000615378 542 ntTSL 3 BASIC4.16□□□□□ -1.74
CCDC144BQ3MJ40 AC009233.1-201ENST00000616477 371 ntBASIC4.16□□□□□ -1.74
CCDC144BQ3MJ40 DLEU2_6.2-201ENST00000620994 136 ntBASIC4.16□□□□□ -1.74
CCDC144BQ3MJ40 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC4.16□□□□□ -1.74
CCDC144BQ3MJ40 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
CCDC144BQ3MJ40 AC004944.1-201ENST00000517807 3059 ntBASIC4.16□□□□□ -1.74
CCDC144BQ3MJ40 ZNF519P1-201ENST00000449011 1626 ntBASIC4.16□□□□□ -1.74
CCDC144BQ3MJ40 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC4.16□□□□□ -1.74
CCDC144BQ3MJ40 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC4.15□□□□□ -1.74
CCDC144BQ3MJ40 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC4.15□□□□□ -1.74
CCDC144BQ3MJ40 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC4.15□□□□□ -1.75
CCDC144BQ3MJ40 RNU6-797P-201ENST00000363101 109 ntBASIC4.15□□□□□ -1.75
CCDC144BQ3MJ40 RNA5SP424-201ENST00000390988 115 ntBASIC4.15□□□□□ -1.75
CCDC144BQ3MJ40 AL365496.1-201ENST00000426885 215 ntBASIC4.15□□□□□ -1.75
CCDC144BQ3MJ40 AC093151.1-201ENST00000427711 313 ntBASIC4.15□□□□□ -1.75
CCDC144BQ3MJ40 RPS15AP10-201ENST00000432472 382 ntBASIC4.15□□□□□ -1.75
CCDC144BQ3MJ40 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC4.15□□□□□ -1.75
CCDC144BQ3MJ40 AC124916.1-201ENST00000444020 547 ntBASIC4.15□□□□□ -1.75
CCDC144BQ3MJ40 AC104472.2-201ENST00000469035 601 ntBASIC4.15□□□□□ -1.75
CCDC144BQ3MJ40 AL049830.2-201ENST00000480072 201 ntBASIC4.15□□□□□ -1.75
CCDC144BQ3MJ40 AC116655.1-201ENST00000508324 901 ntBASIC4.15□□□□□ -1.75
CCDC144BQ3MJ40 AC010186.2-204ENST00000537668 439 ntBASIC4.15□□□□□ -1.75
CCDC144BQ3MJ40 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC4.15□□□□□ -1.75
CCDC144BQ3MJ40 DNAJC8P1-201ENST00000554535 372 ntBASIC4.15□□□□□ -1.75
CCDC144BQ3MJ40 AL121821.2-201ENST00000556081 394 ntBASIC4.15□□□□□ -1.75
CCDC144BQ3MJ40 MIR4790-201ENST00000577799 79 ntBASIC4.15□□□□□ -1.75
CCDC144BQ3MJ40 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC4.15□□□□□ -1.75
CCDC144BQ3MJ40 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
CCDC144BQ3MJ40 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC4.15□□□□□ -1.75
CCDC144BQ3MJ40 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC4.14□□□□□ -1.75
CCDC144BQ3MJ40 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC4.14□□□□□ -1.75
CCDC144BQ3MJ40 RNU6-799P-201ENST00000363567 107 ntBASIC4.14□□□□□ -1.75
CCDC144BQ3MJ40 RNA5SP139-201ENST00000364340 117 ntBASIC4.14□□□□□ -1.75
CCDC144BQ3MJ40 RNU1-100P-201ENST00000365255 165 ntBASIC4.14□□□□□ -1.75
CCDC144BQ3MJ40 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
CCDC144BQ3MJ40 RNA5SP354-201ENST00000391247 136 ntBASIC4.14□□□□□ -1.75
CCDC144BQ3MJ40 AL445529.1-201ENST00000398713 389 ntBASIC4.14□□□□□ -1.75
CCDC144BQ3MJ40 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC4.14□□□□□ -1.75
CCDC144BQ3MJ40 AL161651.1-201ENST00000440882 223 ntBASIC4.14□□□□□ -1.75
CCDC144BQ3MJ40 AL031274.1-201ENST00000450334 232 ntBASIC4.14□□□□□ -1.75
CCDC144BQ3MJ40 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC4.14□□□□□ -1.75
CCDC144BQ3MJ40 RNU6-1037P-201ENST00000459571 107 ntBASIC4.14□□□□□ -1.75
CCDC144BQ3MJ40 AC008155.2-201ENST00000464337 397 ntBASIC4.14□□□□□ -1.75
CCDC144BQ3MJ40 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC4.14□□□□□ -1.75
CCDC144BQ3MJ40 AC092436.3-201ENST00000511788 257 ntBASIC4.14□□□□□ -1.75
CCDC144BQ3MJ40 LIAS-206ENST00000513731 826 ntTSL 5 BASIC4.14□□□□□ -1.75
CCDC144BQ3MJ40 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC4.14□□□□□ -1.75
CCDC144BQ3MJ40 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC4.14□□□□□ -1.75
CCDC144BQ3MJ40 RPS3AP23-202ENST00000574601 686 ntBASIC4.14□□□□□ -1.75
CCDC144BQ3MJ40 MIR5047-201ENST00000579212 100 ntBASIC4.14□□□□□ -1.75
CCDC144BQ3MJ40 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC4.14□□□□□ -1.75
CCDC144BQ3MJ40 USP12-203ENST00000620323 349 ntTSL 3 BASIC4.14□□□□□ -1.75
CCDC144BQ3MJ40 MIR3651-201ENST00000630427 90 ntBASIC4.14□□□□□ -1.75
CCDC144BQ3MJ40 AL133216.2-202ENST00000634512 349 ntBASIC4.14□□□□□ -1.75
CCDC144BQ3MJ40 U4.7-201ENST00000638126 106 ntBASIC4.14□□□□□ -1.75
CCDC144BQ3MJ40 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CCDC144BQ3MJ40 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CCDC144BQ3MJ40 Y_RNA.184-201ENST00000363884 108 ntBASIC4.13□□□□□ -1.75
CCDC144BQ3MJ40 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
CCDC144BQ3MJ40 MIR548K-201ENST00000408406 116 ntBASIC4.13□□□□□ -1.75
CCDC144BQ3MJ40 AC023141.4-201ENST00000412031 328 ntBASIC4.13□□□□□ -1.75
CCDC144BQ3MJ40 ARF4P2-201ENST00000430209 526 ntBASIC4.13□□□□□ -1.75
CCDC144BQ3MJ40 MTND1P17-201ENST00000448961 204 ntBASIC4.13□□□□□ -1.75
CCDC144BQ3MJ40 AC092001.1-201ENST00000453012 261 ntBASIC4.13□□□□□ -1.75
CCDC144BQ3MJ40 AC130509.1-201ENST00000464158 433 ntBASIC4.13□□□□□ -1.75
CCDC144BQ3MJ40 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC4.13□□□□□ -1.75
CCDC144BQ3MJ40 SNORA43.2-201ENST00000516652 128 ntBASIC4.13□□□□□ -1.75
CCDC144BQ3MJ40 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC4.13□□□□□ -1.75
CCDC144BQ3MJ40 AC008011.1-201ENST00000545989 227 ntBASIC4.13□□□□□ -1.75
CCDC144BQ3MJ40 UBE2Q2P8-201ENST00000560644 102 ntBASIC4.13□□□□□ -1.75
CCDC144BQ3MJ40 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC4.13□□□□□ -1.75
CCDC144BQ3MJ40 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC4.13□□□□□ -1.75
CCDC144BQ3MJ40 TEX41-280ENST00000629185 591 ntTSL 5 BASIC4.13□□□□□ -1.75
CCDC144BQ3MJ40 AP000553.6-201ENST00000641242 118 ntBASIC4.13□□□□□ -1.75
CCDC144BQ3MJ40 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CCDC144BQ3MJ40 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
CCDC144BQ3MJ40 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CCDC144BQ3MJ40 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC4.13□□□□□ -1.75
CCDC144BQ3MJ40 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CCDC144BQ3MJ40 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CCDC144BQ3MJ40 GABRG2-229ENST00000641017 3628 ntBASIC4.12□□□□□ -1.75
CCDC144BQ3MJ40 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC4.12□□□□□ -1.75
CCDC144BQ3MJ40 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CCDC144BQ3MJ40 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CCDC144BQ3MJ40 RNU6-78P-201ENST00000362897 107 ntBASIC4.12□□□□□ -1.75
CCDC144BQ3MJ40 MIR767-201ENST00000390228 109 ntBASIC4.12□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 122.3 ms