Protein–RNA interactions for Protein: Q06643

LTB, Lymphotoxin-beta, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBQ06643 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC3.06□□□□□ -1.92
LTBQ06643 AC009812.4-201ENST00000569134 1805 ntBASIC3.06□□□□□ -1.92
LTBQ06643 AC006504.6-201ENST00000590142 199 ntBASIC3.06□□□□□ -1.92
LTBQ06643 AL355802.3-201ENST00000607571 545 ntBASIC3.06□□□□□ -1.92
LTBQ06643 MIR7851-201ENST00000610611 160 ntBASIC3.06□□□□□ -1.92
LTBQ06643 AC013412.1-201ENST00000610687 192 ntBASIC3.06□□□□□ -1.92
LTBQ06643 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC3.06□□□□□ -1.92
LTBQ06643 MIR7112-201ENST00000616126 65 ntBASIC3.06□□□□□ -1.92
LTBQ06643 uc_338.22-201ENST00000622722 187 ntBASIC3.06□□□□□ -1.92
LTBQ06643 AC007496.3-201ENST00000624987 3443 ntBASIC3.06□□□□□ -1.92
LTBQ06643 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.05□□□□□ -1.92
LTBQ06643 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.05□□□□□ -1.92
LTBQ06643 RNU6-600P-201ENST00000362524 99 ntBASIC3.05□□□□□ -1.92
LTBQ06643 Y_RNA.146-201ENST00000363549 102 ntBASIC3.05□□□□□ -1.92
LTBQ06643 SNORA80A-201ENST00000363922 136 ntBASIC3.05□□□□□ -1.92
LTBQ06643 SNORA22B-201ENST00000383876 138 ntBASIC3.05□□□□□ -1.92
LTBQ06643 RNU6-434P-201ENST00000384376 107 ntBASIC3.05□□□□□ -1.92
LTBQ06643 Y_RNA.482-201ENST00000384377 111 ntBASIC3.05□□□□□ -1.92
LTBQ06643 RNU6-1160P-201ENST00000384546 104 ntBASIC3.05□□□□□ -1.92
LTBQ06643 AL360182.1-201ENST00000397433 468 ntBASIC3.05□□□□□ -1.92
LTBQ06643 RNU6ATAC16P-201ENST00000408591 138 ntBASIC3.05□□□□□ -1.92
LTBQ06643 AC126124.2-201ENST00000413542 321 ntBASIC3.05□□□□□ -1.92
LTBQ06643 AL139396.1-201ENST00000421137 167 ntBASIC3.05□□□□□ -1.92
LTBQ06643 PMCHL1-202ENST00000423102 261 ntBASIC3.05□□□□□ -1.92
LTBQ06643 AL160275.3-201ENST00000423876 471 ntBASIC3.05□□□□□ -1.92
LTBQ06643 AL590632.1-201ENST00000424289 371 ntBASIC3.05□□□□□ -1.92
LTBQ06643 MTCO1P39-201ENST00000426148 480 ntBASIC3.05□□□□□ -1.92
LTBQ06643 MTATP6P4-201ENST00000427725 675 ntBASIC3.05□□□□□ -1.92
LTBQ06643 HMGB1P12-201ENST00000438594 598 ntBASIC3.05□□□□□ -1.92
LTBQ06643 HMGB3P8-201ENST00000449709 577 ntBASIC3.05□□□□□ -1.92
LTBQ06643 RPL30P15-201ENST00000457129 321 ntBASIC3.05□□□□□ -1.92
LTBQ06643 HMGN1P18-201ENST00000457642 277 ntBASIC3.05□□□□□ -1.92
LTBQ06643 AC130509.1-201ENST00000464158 433 ntBASIC3.05□□□□□ -1.92
LTBQ06643 TRBV1-201ENST00000476502 284 ntBASIC3.05□□□□□ -1.92
LTBQ06643 RPL21P13-201ENST00000488305 481 ntBASIC3.05□□□□□ -1.92
LTBQ06643 RPL7P47-201ENST00000497299 556 ntBASIC3.05□□□□□ -1.92
LTBQ06643 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC3.05□□□□□ -1.92
LTBQ06643 RNU6-677P-201ENST00000516914 101 ntBASIC3.05□□□□□ -1.92
LTBQ06643 SNORA31.20-201ENST00000517111 133 ntBASIC3.05□□□□□ -1.92
LTBQ06643 RNU6-840P-201ENST00000517275 65 ntBASIC3.05□□□□□ -1.92
LTBQ06643 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC3.05□□□□□ -1.92
LTBQ06643 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
LTBQ06643 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC3.05□□□□□ -1.92
LTBQ06643 MIR3941-201ENST00000582572 103 ntBASIC3.05□□□□□ -1.92
LTBQ06643 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.05□□□□□ -1.92
LTBQ06643 AC019193.3-201ENST00000609144 554 ntBASIC3.05□□□□□ -1.92
LTBQ06643 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC3.05□□□□□ -1.92
LTBQ06643 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.05□□□□□ -1.92
LTBQ06643 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.05□□□□□ -1.92
LTBQ06643 AP001148.1-201ENST00000624124 2359 ntBASIC3.05□□□□□ -1.92
LTBQ06643 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.05□□□□□ -1.92
LTBQ06643 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
LTBQ06643 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
LTBQ06643 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC3.05□□□□□ -1.92
LTBQ06643 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
LTBQ06643 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.05□□□□□ -1.92
LTBQ06643 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC3.04□□□□□ -1.92
LTBQ06643 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.04□□□□□ -1.92
LTBQ06643 RNU6-562P-201ENST00000362731 107 ntBASIC3.04□□□□□ -1.92
LTBQ06643 RNA5SP374-201ENST00000362939 125 ntBASIC3.04□□□□□ -1.92
LTBQ06643 RNU6-1303P-201ENST00000364841 107 ntBASIC3.04□□□□□ -1.92
LTBQ06643 RNU6-805P-201ENST00000365643 106 ntBASIC3.04□□□□□ -1.92
LTBQ06643 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
LTBQ06643 RNU6-601P-201ENST00000384540 107 ntBASIC3.04□□□□□ -1.92
LTBQ06643 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.04□□□□□ -1.92
LTBQ06643 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC3.04□□□□□ -1.92
LTBQ06643 RN7SKP111-201ENST00000410349 271 ntBASIC3.04□□□□□ -1.92
LTBQ06643 RPS12P24-201ENST00000412619 387 ntBASIC3.04□□□□□ -1.92
LTBQ06643 AC245291.1-201ENST00000419501 328 ntBASIC3.04□□□□□ -1.92
LTBQ06643 RPL7P37-201ENST00000425095 738 ntBASIC3.04□□□□□ -1.92
LTBQ06643 AL591704.1-201ENST00000432574 275 ntBASIC3.04□□□□□ -1.92
LTBQ06643 AL591212.2-201ENST00000433923 257 ntBASIC3.04□□□□□ -1.92
LTBQ06643 AL121871.1-201ENST00000443413 436 ntBASIC3.04□□□□□ -1.92
LTBQ06643 AL137792.2-201ENST00000443484 235 ntBASIC3.04□□□□□ -1.92
LTBQ06643 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.04□□□□□ -1.92
LTBQ06643 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.04□□□□□ -1.92
LTBQ06643 ELOCP24-201ENST00000456370 334 ntBASIC3.04□□□□□ -1.92
LTBQ06643 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC3.04□□□□□ -1.92
LTBQ06643 Y_RNA.653-201ENST00000459091 95 ntBASIC3.04□□□□□ -1.92
LTBQ06643 RPL23AP67-201ENST00000465341 474 ntBASIC3.04□□□□□ -1.92
LTBQ06643 S100A11P2-201ENST00000467589 312 ntBASIC3.04□□□□□ -1.92
LTBQ06643 RPS4XP13-201ENST00000483219 789 ntBASIC3.04□□□□□ -1.92
LTBQ06643 MTCYBP40-201ENST00000509390 1135 ntBASIC3.04□□□□□ -1.92
LTBQ06643 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
LTBQ06643 RNU6-1332P-201ENST00000516666 104 ntBASIC3.04□□□□□ -1.92
LTBQ06643 RNU6-1073P-201ENST00000517182 106 ntBASIC3.04□□□□□ -1.92
LTBQ06643 AC107934.2-201ENST00000518653 310 ntBASIC3.04□□□□□ -1.92
LTBQ06643 IL7-206ENST00000520269 456 ntTSL 3 BASIC3.04□□□□□ -1.92
LTBQ06643 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC3.04□□□□□ -1.92
LTBQ06643 APAF1-207ENST00000547743 651 ntTSL 3 BASIC3.04□□□□□ -1.92
LTBQ06643 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC3.04□□□□□ -1.92
LTBQ06643 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC3.04□□□□□ -1.92
LTBQ06643 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.04□□□□□ -1.92
LTBQ06643 MIR5690-201ENST00000583739 73 ntBASIC3.04□□□□□ -1.92
LTBQ06643 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.04□□□□□ -1.92
LTBQ06643 AC012119.1-201ENST00000603184 222 ntBASIC3.04□□□□□ -1.92
LTBQ06643 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC3.04□□□□□ -1.92
LTBQ06643 AC006023.1-201ENST00000603944 259 ntBASIC3.04□□□□□ -1.92
LTBQ06643 AC016925.2-201ENST00000605108 242 ntBASIC3.04□□□□□ -1.92
LTBQ06643 MIR15A-201ENST00000607334 83 ntBASIC3.04□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 85.3 ms