Protein–RNA interactions for Protein: P78413

IRX4, Iroquois-class homeodomain protein IRX-4, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX4P78413 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC2.7□□□□□ -1.98
IRX4P78413 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.69□□□□□ -1.98
IRX4P78413 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.69□□□□□ -1.98
IRX4P78413 AL137003.2-201ENST00000606924 2538 ntBASIC2.69□□□□□ -1.98
IRX4P78413 RNU6-179P-201ENST00000363350 107 ntBASIC2.69□□□□□ -1.98
IRX4P78413 SNORA62.1-201ENST00000364287 154 ntBASIC2.69□□□□□ -1.98
IRX4P78413 Y_RNA.409-201ENST00000383990 98 ntBASIC2.69□□□□□ -1.98
IRX4P78413 SNORA24.1-201ENST00000384401 135 ntBASIC2.69□□□□□ -1.98
IRX4P78413 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
IRX4P78413 RNU6-817P-201ENST00000391083 104 ntBASIC2.69□□□□□ -1.98
IRX4P78413 MTCO3P40-201ENST00000392516 676 ntBASIC2.69□□□□□ -1.98
IRX4P78413 AL356057.3-201ENST00000402607 340 ntBASIC2.69□□□□□ -1.98
IRX4P78413 RNU2-49P-201ENST00000410666 184 ntBASIC2.69□□□□□ -1.98
IRX4P78413 Y_RNA.619-201ENST00000410951 90 ntBASIC2.69□□□□□ -1.98
IRX4P78413 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC2.69□□□□□ -1.98
IRX4P78413 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC2.69□□□□□ -1.98
IRX4P78413 AC009963.1-201ENST00000417265 157 ntBASIC2.69□□□□□ -1.98
IRX4P78413 SKA2P1-201ENST00000425592 390 ntBASIC2.69□□□□□ -1.98
IRX4P78413 ISCA1P1-201ENST00000426679 387 ntBASIC2.69□□□□□ -1.98
IRX4P78413 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC2.69□□□□□ -1.98
IRX4P78413 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC2.69□□□□□ -1.98
IRX4P78413 RPL23AP70-201ENST00000483361 460 ntBASIC2.69□□□□□ -1.98
IRX4P78413 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC2.69□□□□□ -1.98
IRX4P78413 SRIP1-201ENST00000489235 288 ntBASIC2.69□□□□□ -1.98
IRX4P78413 SNORD27.1-201ENST00000516319 72 ntBASIC2.69□□□□□ -1.98
IRX4P78413 RNU6-314P-201ENST00000516574 104 ntBASIC2.69□□□□□ -1.98
IRX4P78413 RNU6-677P-201ENST00000516914 101 ntBASIC2.69□□□□□ -1.98
IRX4P78413 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC2.69□□□□□ -1.98
IRX4P78413 RPL7P20-201ENST00000520308 745 ntBASIC2.69□□□□□ -1.98
IRX4P78413 AP003122.3-201ENST00000526316 255 ntBASIC2.69□□□□□ -1.98
IRX4P78413 AP003033.1-201ENST00000527244 415 ntBASIC2.69□□□□□ -1.98
IRX4P78413 OR5AL2P-201ENST00000532185 920 ntBASIC2.69□□□□□ -1.98
IRX4P78413 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC2.69□□□□□ -1.98
IRX4P78413 GLYCAM1-201ENST00000546596 285 ntBASIC2.69□□□□□ -1.98
IRX4P78413 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC2.69□□□□□ -1.98
IRX4P78413 AC024619.4-201ENST00000580924 316 ntBASIC2.69□□□□□ -1.98
IRX4P78413 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC2.69□□□□□ -1.98
IRX4P78413 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC2.69□□□□□ -1.98
IRX4P78413 AF250324.2-201ENST00000608299 610 ntBASIC2.69□□□□□ -1.98
IRX4P78413 AL365204.3-201ENST00000612448 685 ntBASIC2.69□□□□□ -1.98
IRX4P78413 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC2.69□□□□□ -1.98
IRX4P78413 AL359880.1-201ENST00000621879 266 ntBASIC2.69□□□□□ -1.98
IRX4P78413 AC025034.2-201ENST00000623264 286 ntBASIC2.69□□□□□ -1.98
IRX4P78413 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
IRX4P78413 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.69□□□□□ -1.98
IRX4P78413 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC2.68□□□□□ -1.98
IRX4P78413 ZNF658B-202ENST00000615961 3375 ntBASIC2.68□□□□□ -1.98
IRX4P78413 RNU6-1180P-201ENST00000364935 107 ntBASIC2.68□□□□□ -1.98
IRX4P78413 Y_RNA.381-201ENST00000365666 102 ntBASIC2.68□□□□□ -1.98
IRX4P78413 CALM2P3-201ENST00000400429 449 ntBASIC2.68□□□□□ -1.98
IRX4P78413 FO393413.1-201ENST00000402892 195 ntBASIC2.68□□□□□ -1.98
IRX4P78413 RNA5SP181-201ENST00000410246 98 ntBASIC2.68□□□□□ -1.98
IRX4P78413 AL353193.1-201ENST00000421444 268 ntBASIC2.68□□□□□ -1.98
IRX4P78413 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
IRX4P78413 AL358075.3-201ENST00000426289 226 ntBASIC2.68□□□□□ -1.98
IRX4P78413 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC2.68□□□□□ -1.98
IRX4P78413 C8orf59P1-201ENST00000429930 303 ntBASIC2.68□□□□□ -1.98
IRX4P78413 GPM6BP2-201ENST00000432046 144 ntBASIC2.68□□□□□ -1.98
IRX4P78413 AC112220.1-201ENST00000434628 355 ntBASIC2.68□□□□□ -1.98
IRX4P78413 MTND4P25-201ENST00000441039 533 ntBASIC2.68□□□□□ -1.98
IRX4P78413 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC2.68□□□□□ -1.98
IRX4P78413 GPM6BP1-201ENST00000446387 144 ntBASIC2.68□□□□□ -1.98
IRX4P78413 RPL23AP20-201ENST00000447965 421 ntBASIC2.68□□□□□ -1.98
IRX4P78413 PSPHP1-201ENST00000450062 261 ntBASIC2.68□□□□□ -1.98
IRX4P78413 AC093899.1-201ENST00000457984 376 ntBASIC2.68□□□□□ -1.98
IRX4P78413 RPS29P15-201ENST00000458329 171 ntBASIC2.68□□□□□ -1.98
IRX4P78413 RNU6-953P-201ENST00000459154 107 ntBASIC2.68□□□□□ -1.98
IRX4P78413 AP001893.2-201ENST00000526949 202 ntBASIC2.68□□□□□ -1.98
IRX4P78413 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
IRX4P78413 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
IRX4P78413 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC2.68□□□□□ -1.98
IRX4P78413 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
IRX4P78413 AL359212.1-201ENST00000556608 614 ntBASIC2.68□□□□□ -1.98
IRX4P78413 AL158032.1-201ENST00000605401 106 ntBASIC2.68□□□□□ -1.98
IRX4P78413 AC130324.3-201ENST00000614165 542 ntBASIC2.68□□□□□ -1.98
IRX4P78413 AC068792.1-201ENST00000621354 417 ntBASIC2.68□□□□□ -1.98
IRX4P78413 AC139792.3-201ENST00000623525 224 ntBASIC2.68□□□□□ -1.98
IRX4P78413 MTND5P42-201ENST00000637720 498 ntBASIC2.68□□□□□ -1.98
IRX4P78413 MTND4P5-201ENST00000435821 1374 ntBASIC2.68□□□□□ -1.98
IRX4P78413 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
IRX4P78413 ZNF680P1-201ENST00000436625 1469 ntBASIC2.68□□□□□ -1.98
IRX4P78413 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC2.68□□□□□ -1.98
IRX4P78413 ZNF271P-202ENST00000465539 1970 ntBASIC2.68□□□□□ -1.98
IRX4P78413 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.68□□□□□ -1.98
IRX4P78413 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.67□□□□□ -1.98
IRX4P78413 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.67□□□□□ -1.98
IRX4P78413 AC138915.1-201ENST00000565427 1685 ntBASIC2.67□□□□□ -1.98
IRX4P78413 OR4G2P-201ENST00000328113 903 ntBASIC2.67□□□□□ -1.98
IRX4P78413 RNU6-61P-201ENST00000365528 109 ntBASIC2.67□□□□□ -1.98
IRX4P78413 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC2.67□□□□□ -1.98
IRX4P78413 MIR454-201ENST00000390180 115 ntBASIC2.67□□□□□ -1.98
IRX4P78413 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
IRX4P78413 RNU6-780P-201ENST00000391030 104 ntBASIC2.67□□□□□ -1.98
IRX4P78413 AL139039.1-201ENST00000401900 692 ntBASIC2.67□□□□□ -1.98
IRX4P78413 RPS4XP7-201ENST00000406274 780 ntBASIC2.67□□□□□ -1.98
IRX4P78413 Y_RNA.599-201ENST00000410489 109 ntBASIC2.67□□□□□ -1.98
IRX4P78413 BPY2DP-201ENST00000422208 265 ntBASIC2.67□□□□□ -1.98
IRX4P78413 TOMM20P4-201ENST00000427861 435 ntBASIC2.67□□□□□ -1.98
IRX4P78413 AL591212.2-201ENST00000433923 257 ntBASIC2.67□□□□□ -1.98
IRX4P78413 RPS15AP5-201ENST00000436276 388 ntBASIC2.67□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 138.1 ms