Protein–RNA interactions for Protein: P56645

PER3, Period circadian protein homolog 3, humanhuman

Predictions only

Length 1,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER3P56645 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
PER3P56645 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
PER3P56645 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC3.6□□□□□ -1.83
PER3P56645 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
PER3P56645 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
PER3P56645 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
PER3P56645 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
PER3P56645 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
PER3P56645 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
PER3P56645 Y_RNA.28-201ENST00000362554 111 ntBASIC3.6□□□□□ -1.83
PER3P56645 RNU6-270P-201ENST00000364131 105 ntBASIC3.6□□□□□ -1.83
PER3P56645 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.6□□□□□ -1.83
PER3P56645 SNORA5A-201ENST00000384111 134 ntBASIC3.6□□□□□ -1.83
PER3P56645 Y_RNA.463-201ENST00000384271 102 ntBASIC3.6□□□□□ -1.83
PER3P56645 SNORA3.3-201ENST00000408712 125 ntBASIC3.6□□□□□ -1.83
PER3P56645 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3.6□□□□□ -1.83
PER3P56645 RPS29P4-201ENST00000414733 161 ntBASIC3.6□□□□□ -1.83
PER3P56645 AL117339.3-201ENST00000418733 162 ntBASIC3.6□□□□□ -1.83
PER3P56645 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC3.6□□□□□ -1.83
PER3P56645 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
PER3P56645 AC091286.1-201ENST00000431233 461 ntBASIC3.6□□□□□ -1.83
PER3P56645 AL133396.1-201ENST00000432048 687 ntBASIC3.6□□□□□ -1.83
PER3P56645 PCMTD1P1-201ENST00000455560 355 ntBASIC3.6□□□□□ -1.83
PER3P56645 snoU109.2-201ENST00000459316 135 ntBASIC3.6□□□□□ -1.83
PER3P56645 SNRPGP3-201ENST00000469405 227 ntBASIC3.6□□□□□ -1.83
PER3P56645 SNORA70.14-201ENST00000516205 110 ntBASIC3.6□□□□□ -1.83
PER3P56645 SYF2P1-201ENST00000550658 413 ntBASIC3.6□□□□□ -1.83
PER3P56645 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC3.6□□□□□ -1.83
PER3P56645 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC3.6□□□□□ -1.83
PER3P56645 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC3.6□□□□□ -1.83
PER3P56645 AC016925.2-201ENST00000605108 242 ntBASIC3.6□□□□□ -1.83
PER3P56645 MIR6868-201ENST00000611215 58 ntBASIC3.6□□□□□ -1.83
PER3P56645 AL591516.1-201ENST00000611326 274 ntBASIC3.6□□□□□ -1.83
PER3P56645 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC3.6□□□□□ -1.83
PER3P56645 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
PER3P56645 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC3.6□□□□□ -1.83
PER3P56645 AC048347.1-201ENST00000624621 427 ntBASIC3.6□□□□□ -1.83
PER3P56645 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
PER3P56645 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
PER3P56645 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.6□□□□□ -1.83
PER3P56645 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
PER3P56645 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.6□□□□□ -1.83
PER3P56645 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
PER3P56645 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
PER3P56645 ZNF807-201ENST00000328088 1707 ntBASIC3.59□□□□□ -1.83
PER3P56645 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
PER3P56645 Y_RNA.2-201ENST00000362330 96 ntBASIC3.59□□□□□ -1.83
PER3P56645 RNU6-827P-201ENST00000365553 106 ntBASIC3.59□□□□□ -1.83
PER3P56645 RNU6-1160P-201ENST00000384546 104 ntBASIC3.59□□□□□ -1.83
PER3P56645 MIR1251-201ENST00000408552 70 ntBASIC3.59□□□□□ -1.83
PER3P56645 RNA5SP31-201ENST00000411144 127 ntBASIC3.59□□□□□ -1.83
PER3P56645 UBE2Q2P12-201ENST00000414573 204 ntBASIC3.59□□□□□ -1.83
PER3P56645 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.59□□□□□ -1.83
PER3P56645 USMG5P1-201ENST00000425964 177 ntBASIC3.59□□□□□ -1.83
PER3P56645 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
PER3P56645 AL158071.1-201ENST00000430315 461 ntBASIC3.59□□□□□ -1.83
PER3P56645 AL031274.1-201ENST00000450334 232 ntBASIC3.59□□□□□ -1.83
PER3P56645 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
PER3P56645 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC3.59□□□□□ -1.83
PER3P56645 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC3.59□□□□□ -1.83
PER3P56645 RPL32P34-201ENST00000486380 400 ntBASIC3.59□□□□□ -1.83
PER3P56645 RPL31P61-201ENST00000496160 376 ntBASIC3.59□□□□□ -1.83
PER3P56645 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC3.59□□□□□ -1.83
PER3P56645 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC3.59□□□□□ -1.83
PER3P56645 RNU6-470P-201ENST00000515954 104 ntBASIC3.59□□□□□ -1.83
PER3P56645 RNU6-976P-201ENST00000516086 111 ntBASIC3.59□□□□□ -1.83
PER3P56645 RNU6-1045P-201ENST00000516321 107 ntBASIC3.59□□□□□ -1.83
PER3P56645 RNU1-103P-201ENST00000516502 125 ntBASIC3.59□□□□□ -1.83
PER3P56645 Y_RNA.687-201ENST00000516558 91 ntBASIC3.59□□□□□ -1.83
PER3P56645 RNU7-143P-201ENST00000516781 65 ntBASIC3.59□□□□□ -1.83
PER3P56645 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC3.59□□□□□ -1.83
PER3P56645 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.59□□□□□ -1.83
PER3P56645 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC3.59□□□□□ -1.83
PER3P56645 AC008121.1-201ENST00000603244 268 ntBASIC3.59□□□□□ -1.83
PER3P56645 AL161629.2-201ENST00000615347 275 ntBASIC3.59□□□□□ -1.83
PER3P56645 PLCE1P1-201ENST00000622094 305 ntBASIC3.59□□□□□ -1.83
PER3P56645 TEX41-300ENST00000631048 69 ntTSL 5 BASIC3.59□□□□□ -1.83
PER3P56645 U6.99-201ENST00000637524 83 ntBASIC3.59□□□□□ -1.83
PER3P56645 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC3.59□□□□□ -1.83
PER3P56645 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
PER3P56645 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC3.59□□□□□ -1.83
PER3P56645 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
PER3P56645 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.59□□□□□ -1.84
PER3P56645 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
PER3P56645 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC3.59□□□□□ -1.84
PER3P56645 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
PER3P56645 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.59□□□□□ -1.84
PER3P56645 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
PER3P56645 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
PER3P56645 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
PER3P56645 Y_RNA.148-201ENST00000363557 117 ntBASIC3.58□□□□□ -1.84
PER3P56645 RNU6-1317P-201ENST00000364582 104 ntBASIC3.58□□□□□ -1.84
PER3P56645 RNU6-174P-201ENST00000410406 106 ntBASIC3.58□□□□□ -1.84
PER3P56645 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.58□□□□□ -1.84
PER3P56645 AL358472.1-201ENST00000431295 329 ntBASIC3.58□□□□□ -1.84
PER3P56645 HMGN2P31-201ENST00000432430 273 ntBASIC3.58□□□□□ -1.84
PER3P56645 AL035666.1-201ENST00000446195 348 ntBASIC3.58□□□□□ -1.84
PER3P56645 HIGD1AP2-201ENST00000446367 280 ntBASIC3.58□□□□□ -1.84
PER3P56645 AC013470.1-201ENST00000453438 462 ntBASIC3.58□□□□□ -1.84
PER3P56645 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC3.58□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 89.9 ms