Protein–RNA interactions for Protein: P55347

PKNOX1, Homeobox protein PKNOX1, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1P55347 RNU1-72P-201ENST00000362976 153 ntBASIC2.04□□□□□ -2.08
PKNOX1P55347 RNU6-395P-201ENST00000365662 106 ntBASIC2.04□□□□□ -2.08
PKNOX1P55347 MIR558-201ENST00000384920 94 ntBASIC2.04□□□□□ -2.08
PKNOX1P55347 Y_RNA.598-201ENST00000410480 95 ntBASIC2.04□□□□□ -2.08
PKNOX1P55347 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC2.04□□□□□ -2.08
PKNOX1P55347 CYCSP48-201ENST00000417124 323 ntBASIC2.04□□□□□ -2.08
PKNOX1P55347 AC016831.2-201ENST00000417179 352 ntBASIC2.04□□□□□ -2.08
PKNOX1P55347 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC2.04□□□□□ -2.08
PKNOX1P55347 ELOCP4-201ENST00000420090 333 ntBASIC2.04□□□□□ -2.08
PKNOX1P55347 AL365203.2-201ENST00000423444 196 ntBASIC2.04□□□□□ -2.08
PKNOX1P55347 RPS3AP44-201ENST00000425466 790 ntBASIC2.04□□□□□ -2.08
PKNOX1P55347 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC2.04□□□□□ -2.08
PKNOX1P55347 RPS24P1-201ENST00000438550 371 ntBASIC2.04□□□□□ -2.08
PKNOX1P55347 MTND1P30-201ENST00000441241 901 ntBASIC2.04□□□□□ -2.08
PKNOX1P55347 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC2.04□□□□□ -2.08
PKNOX1P55347 MTND6P13-201ENST00000443510 523 ntBASIC2.04□□□□□ -2.08
PKNOX1P55347 AC003071.1-201ENST00000451219 789 ntBASIC2.04□□□□□ -2.08
PKNOX1P55347 FABP5P13-201ENST00000452144 328 ntBASIC2.04□□□□□ -2.08
PKNOX1P55347 BTF3P15-201ENST00000455606 336 ntBASIC2.04□□□□□ -2.08
PKNOX1P55347 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC2.04□□□□□ -2.08
PKNOX1P55347 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC2.04□□□□□ -2.08
PKNOX1P55347 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC2.04□□□□□ -2.08
PKNOX1P55347 SMURF2P1-201ENST00000514992 481 ntBASIC2.04□□□□□ -2.08
PKNOX1P55347 RNA5SP112-201ENST00000515937 99 ntBASIC2.04□□□□□ -2.08
PKNOX1P55347 RNU2-46P-201ENST00000517038 113 ntBASIC2.04□□□□□ -2.08
PKNOX1P55347 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC2.04□□□□□ -2.08
PKNOX1P55347 AC025678.1-201ENST00000567861 338 ntBASIC2.04□□□□□ -2.08
PKNOX1P55347 AC109446.2-201ENST00000567872 497 ntBASIC2.04□□□□□ -2.08
PKNOX1P55347 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC2.04□□□□□ -2.08
PKNOX1P55347 MIR3915-201ENST00000578518 97 ntBASIC2.04□□□□□ -2.08
PKNOX1P55347 AC009314.1-201ENST00000603871 304 ntBASIC2.04□□□□□ -2.08
PKNOX1P55347 SNORD14A-201ENST00000606526 91 ntBASIC2.04□□□□□ -2.08
PKNOX1P55347 AC012409.4-201ENST00000612923 249 ntBASIC2.04□□□□□ -2.08
PKNOX1P55347 USP12-203ENST00000620323 349 ntTSL 3 BASIC2.04□□□□□ -2.08
PKNOX1P55347 AC024940.5-201ENST00000622889 474 ntBASIC2.04□□□□□ -2.08
PKNOX1P55347 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.03□□□□□ -2.08
PKNOX1P55347 HSPA8P4-201ENST00000511877 1920 ntBASIC2.03□□□□□ -2.08
PKNOX1P55347 MTND5P6-201ENST00000422338 1798 ntBASIC2.03□□□□□ -2.08
PKNOX1P55347 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
PKNOX1P55347 DLEU2_6.3-201ENST00000340052 136 ntBASIC2.03□□□□□ -2.08
PKNOX1P55347 RNU1-91P-201ENST00000364746 163 ntBASIC2.03□□□□□ -2.08
PKNOX1P55347 SNORA24.1-201ENST00000384401 135 ntBASIC2.03□□□□□ -2.08
PKNOX1P55347 RPS3AP36-201ENST00000398190 775 ntBASIC2.03□□□□□ -2.08
PKNOX1P55347 AL133475.1-201ENST00000404414 305 ntBASIC2.03□□□□□ -2.08
PKNOX1P55347 RNU4-53P-201ENST00000410828 140 ntBASIC2.03□□□□□ -2.08
PKNOX1P55347 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC2.03□□□□□ -2.08
PKNOX1P55347 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC2.03□□□□□ -2.08
PKNOX1P55347 MED13P1-201ENST00000428342 171 ntBASIC2.03□□□□□ -2.08
PKNOX1P55347 AC104850.1-201ENST00000435940 476 ntBASIC2.03□□□□□ -2.08
PKNOX1P55347 AC016691.1-201ENST00000441321 413 ntBASIC2.03□□□□□ -2.08
PKNOX1P55347 GPM6BP3-201ENST00000442797 145 ntBASIC2.03□□□□□ -2.08
PKNOX1P55347 RGS5-217ENST00000451759 835 ntTSL 3 BASIC2.03□□□□□ -2.08
PKNOX1P55347 AL583843.1-201ENST00000456070 346 ntBASIC2.03□□□□□ -2.08
PKNOX1P55347 AC008526.1-201ENST00000509149 338 ntBASIC2.03□□□□□ -2.08
PKNOX1P55347 AC108078.2-201ENST00000510750 236 ntBASIC2.03□□□□□ -2.08
PKNOX1P55347 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC2.03□□□□□ -2.08
PKNOX1P55347 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC2.03□□□□□ -2.08
PKNOX1P55347 RNA5SP364-201ENST00000516938 78 ntBASIC2.03□□□□□ -2.08
PKNOX1P55347 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC2.03□□□□□ -2.08
PKNOX1P55347 AC026464.5-201ENST00000562497 722 ntBASIC2.03□□□□□ -2.08
PKNOX1P55347 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.03□□□□□ -2.08
PKNOX1P55347 AL138976.2-201ENST00000563989 694 ntBASIC2.03□□□□□ -2.08
PKNOX1P55347 AC012213.3-201ENST00000577199 777 ntBASIC2.03□□□□□ -2.08
PKNOX1P55347 AL359547.2-201ENST00000615810 418 ntBASIC2.03□□□□□ -2.08
PKNOX1P55347 DLEU2_6.2-201ENST00000620994 136 ntBASIC2.03□□□□□ -2.08
PKNOX1P55347 AC244517.12-201ENST00000623581 663 ntBASIC2.03□□□□□ -2.08
PKNOX1P55347 AC007494.3-201ENST00000624660 743 ntBASIC2.03□□□□□ -2.08
PKNOX1P55347 AL359851.1-201ENST00000569460 4997 ntBASIC2.02□□□□□ -2.09
PKNOX1P55347 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.02□□□□□ -2.09
PKNOX1P55347 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
PKNOX1P55347 Z75746.1-201ENST00000440243 2080 ntBASIC2.02□□□□□ -2.09
PKNOX1P55347 OR56A5-201ENST00000340110 738 ntBASIC2.02□□□□□ -2.09
PKNOX1P55347 U8.3-201ENST00000363321 132 ntBASIC2.02□□□□□ -2.09
PKNOX1P55347 RNU5A-2P-201ENST00000384337 116 ntBASIC2.02□□□□□ -2.09
PKNOX1P55347 FTH1P15-201ENST00000406984 280 ntBASIC2.02□□□□□ -2.09
PKNOX1P55347 SNORA11.4-201ENST00000408823 129 ntBASIC2.02□□□□□ -2.09
PKNOX1P55347 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC2.02□□□□□ -2.09
PKNOX1P55347 CYCSP46-201ENST00000423569 204 ntBASIC2.02□□□□□ -2.09
PKNOX1P55347 AL160275.3-201ENST00000423876 471 ntBASIC2.02□□□□□ -2.09
PKNOX1P55347 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC2.02□□□□□ -2.09
PKNOX1P55347 AL445567.1-201ENST00000439121 144 ntBASIC2.02□□□□□ -2.09
PKNOX1P55347 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC2.02□□□□□ -2.09
PKNOX1P55347 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC2.02□□□□□ -2.09
PKNOX1P55347 PSPHP1-201ENST00000450062 261 ntBASIC2.02□□□□□ -2.09
PKNOX1P55347 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC2.02□□□□□ -2.09
PKNOX1P55347 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC2.02□□□□□ -2.09
PKNOX1P55347 AP001486.1-201ENST00000463339 476 ntBASIC2.02□□□□□ -2.09
PKNOX1P55347 RPL7P43-201ENST00000478876 753 ntBASIC2.02□□□□□ -2.09
PKNOX1P55347 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC2.02□□□□□ -2.09
PKNOX1P55347 AC112206.3-201ENST00000514578 389 ntBASIC2.02□□□□□ -2.09
PKNOX1P55347 RNU6-123P-201ENST00000516163 102 ntBASIC2.02□□□□□ -2.09
PKNOX1P55347 CBX3P7-201ENST00000532876 502 ntBASIC2.02□□□□□ -2.09
PKNOX1P55347 AC135279.1-201ENST00000543493 504 ntBASIC2.02□□□□□ -2.09
PKNOX1P55347 AL133241.1-201ENST00000556832 487 ntBASIC2.02□□□□□ -2.09
PKNOX1P55347 AC005771.1-201ENST00000585581 349 ntBASIC2.02□□□□□ -2.09
PKNOX1P55347 DEFB131E-202ENST00000602581 683 ntBASIC2.02□□□□□ -2.09
PKNOX1P55347 AC012360.2-201ENST00000609349 391 ntBASIC2.02□□□□□ -2.09
PKNOX1P55347 AC009233.1-201ENST00000616477 371 ntBASIC2.02□□□□□ -2.09
PKNOX1P55347 U4atac.1-201ENST00000618345 95 ntBASIC2.02□□□□□ -2.09
PKNOX1P55347 AL603839.4-201ENST00000624658 1005 ntBASIC2.02□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 97.3 ms