Protein–RNA interactions for Protein: P55316

FOXG1, Forkhead box protein G1, humanhuman

Predicted RBP Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXG1P55316 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.12□□□□□ -1.91
FOXG1P55316 AL365440.1-201ENST00000436135 2167 ntBASIC3.12□□□□□ -1.91
FOXG1P55316 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
FOXG1P55316 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.12□□□□□ -1.91
FOXG1P55316 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.12□□□□□ -1.91
FOXG1P55316 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.12□□□□□ -1.91
FOXG1P55316 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
FOXG1P55316 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.12□□□□□ -1.91
FOXG1P55316 MAPK10-373ENST00000641983 6772 ntBASIC3.11□□□□□ -1.91
FOXG1P55316 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC3.11□□□□□ -1.91
FOXG1P55316 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
FOXG1P55316 Y_RNA.26-201ENST00000362539 101 ntBASIC3.11□□□□□ -1.91
FOXG1P55316 Y_RNA.60-201ENST00000362831 98 ntBASIC3.11□□□□□ -1.91
FOXG1P55316 RNU6-335P-201ENST00000364563 113 ntBASIC3.11□□□□□ -1.91
FOXG1P55316 SNORD14.1-201ENST00000365609 90 ntBASIC3.11□□□□□ -1.91
FOXG1P55316 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
FOXG1P55316 RNU6-214P-201ENST00000384130 107 ntBASIC3.11□□□□□ -1.91
FOXG1P55316 SNORA41-201ENST00000384675 132 ntBASIC3.11□□□□□ -1.91
FOXG1P55316 RNU6-713P-201ENST00000384761 107 ntBASIC3.11□□□□□ -1.91
FOXG1P55316 MIR1252-201ENST00000408861 65 ntBASIC3.11□□□□□ -1.91
FOXG1P55316 AC099677.1-201ENST00000420575 175 ntBASIC3.11□□□□□ -1.91
FOXG1P55316 YME1L1P1-201ENST00000429435 297 ntBASIC3.11□□□□□ -1.91
FOXG1P55316 CYCSP4-201ENST00000429682 331 ntBASIC3.11□□□□□ -1.91
FOXG1P55316 AL359672.1-201ENST00000442302 409 ntBASIC3.11□□□□□ -1.91
FOXG1P55316 AL358232.1-201ENST00000448030 501 ntBASIC3.11□□□□□ -1.91
FOXG1P55316 SNORD127-201ENST00000458892 86 ntBASIC3.11□□□□□ -1.91
FOXG1P55316 U3.44-201ENST00000458938 192 ntBASIC3.11□□□□□ -1.91
FOXG1P55316 RN7SL293P-201ENST00000481765 281 ntBASIC3.11□□□□□ -1.91
FOXG1P55316 HMGB3P17-201ENST00000504195 649 ntBASIC3.11□□□□□ -1.91
FOXG1P55316 VN1R104P-201ENST00000505115 1009 ntBASIC3.11□□□□□ -1.91
FOXG1P55316 CYCSP27-201ENST00000527643 293 ntBASIC3.11□□□□□ -1.91
FOXG1P55316 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC3.11□□□□□ -1.91
FOXG1P55316 MTND4LP5-201ENST00000605152 292 ntBASIC3.11□□□□□ -1.91
FOXG1P55316 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
FOXG1P55316 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC3.11□□□□□ -1.91
FOXG1P55316 TUG1_2.1-201ENST00000614234 87 ntBASIC3.11□□□□□ -1.91
FOXG1P55316 XIST_intron.1-201ENST00000619444 68 ntBASIC3.11□□□□□ -1.91
FOXG1P55316 U7.8-201ENST00000619968 63 ntBASIC3.11□□□□□ -1.91
FOXG1P55316 AC092628.2-201ENST00000622492 339 ntBASIC3.11□□□□□ -1.91
FOXG1P55316 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.11□□□□□ -1.91
FOXG1P55316 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.11□□□□□ -1.91
FOXG1P55316 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.11□□□□□ -1.91
FOXG1P55316 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.11□□□□□ -1.91
FOXG1P55316 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
FOXG1P55316 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
FOXG1P55316 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
FOXG1P55316 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
FOXG1P55316 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
FOXG1P55316 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.1□□□□□ -1.91
FOXG1P55316 ST7-221ENST00000465133 2155 ntTSL 5 BASIC3.1□□□□□ -1.91
FOXG1P55316 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
FOXG1P55316 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
FOXG1P55316 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
FOXG1P55316 Y_RNA.48-201ENST00000362710 103 ntBASIC3.1□□□□□ -1.91
FOXG1P55316 RNU6-1249P-201ENST00000363237 111 ntBASIC3.1□□□□□ -1.91
FOXG1P55316 RNU6-263P-201ENST00000363811 107 ntBASIC3.1□□□□□ -1.91
FOXG1P55316 RNY3P11-201ENST00000364153 102 ntBASIC3.1□□□□□ -1.91
FOXG1P55316 RNU6-1303P-201ENST00000364841 107 ntBASIC3.1□□□□□ -1.91
FOXG1P55316 RNU6-806P-201ENST00000365147 105 ntBASIC3.1□□□□□ -1.91
FOXG1P55316 Y_RNA.350-201ENST00000365409 98 ntBASIC3.1□□□□□ -1.91
FOXG1P55316 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.1□□□□□ -1.91
FOXG1P55316 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC3.1□□□□□ -1.91
FOXG1P55316 RNU6-1062P-201ENST00000383908 107 ntBASIC3.1□□□□□ -1.91
FOXG1P55316 Y_RNA.483-201ENST00000384380 101 ntBASIC3.1□□□□□ -1.91
FOXG1P55316 MIR218-2-201ENST00000385006 110 ntBASIC3.1□□□□□ -1.91
FOXG1P55316 RNU2-38P-201ENST00000410856 79 ntBASIC3.1□□□□□ -1.91
FOXG1P55316 AC092447.6-201ENST00000414578 210 ntBASIC3.1□□□□□ -1.91
FOXG1P55316 PGBD4P6-201ENST00000421501 610 ntBASIC3.1□□□□□ -1.91
FOXG1P55316 ELOCP20-201ENST00000422460 345 ntBASIC3.1□□□□□ -1.91
FOXG1P55316 AC099799.1-201ENST00000439809 192 ntBASIC3.1□□□□□ -1.91
FOXG1P55316 AC011816.1-201ENST00000441346 546 ntBASIC3.1□□□□□ -1.91
FOXG1P55316 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.1□□□□□ -1.91
FOXG1P55316 SNORD105B-201ENST00000458770 79 ntBASIC3.1□□□□□ -1.91
FOXG1P55316 RPS23P3-201ENST00000470993 430 ntBASIC3.1□□□□□ -1.91
FOXG1P55316 AC078918.1-201ENST00000498515 228 ntBASIC3.1□□□□□ -1.91
FOXG1P55316 RNU6-390P-201ENST00000516259 103 ntBASIC3.1□□□□□ -1.91
FOXG1P55316 Y_RNA.715-201ENST00000517082 110 ntBASIC3.1□□□□□ -1.91
FOXG1P55316 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC3.1□□□□□ -1.91
FOXG1P55316 IGHV3-76-201ENST00000522465 295 ntBASIC3.1□□□□□ -1.91
FOXG1P55316 CR383656.7-201ENST00000548164 174 ntBASIC3.1□□□□□ -1.91
FOXG1P55316 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC3.1□□□□□ -1.91
FOXG1P55316 AC005899.2-201ENST00000584353 90 ntBASIC3.1□□□□□ -1.91
FOXG1P55316 AC067852.3-201ENST00000589177 561 ntBASIC3.1□□□□□ -1.91
FOXG1P55316 SNRPGP15-201ENST00000600149 222 ntBASIC3.1□□□□□ -1.91
FOXG1P55316 AC012119.1-201ENST00000603184 222 ntBASIC3.1□□□□□ -1.91
FOXG1P55316 AC004805.2-201ENST00000605382 482 ntBASIC3.1□□□□□ -1.91
FOXG1P55316 AC002044.1-201ENST00000606707 158 ntBASIC3.1□□□□□ -1.91
FOXG1P55316 U3.45-201ENST00000607547 219 ntBASIC3.1□□□□□ -1.91
FOXG1P55316 AC141273.2-201ENST00000618989 130 ntBASIC3.1□□□□□ -1.91
FOXG1P55316 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
FOXG1P55316 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
FOXG1P55316 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC3.1□□□□□ -1.91
FOXG1P55316 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
FOXG1P55316 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
FOXG1P55316 AC091152.2-201ENST00000591628 2569 ntBASIC3.09□□□□□ -1.91
FOXG1P55316 TNPO1P3-201ENST00000436471 2662 ntBASIC3.09□□□□□ -1.91
FOXG1P55316 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.09□□□□□ -1.91
FOXG1P55316 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC3.09□□□□□ -1.91
FOXG1P55316 RNU4-35P-201ENST00000362588 141 ntBASIC3.09□□□□□ -1.91
FOXG1P55316 Y_RNA.64-201ENST00000362845 102 ntBASIC3.09□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 127.1 ms