Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 RNU6-851P-201ENST00000384565 107 ntBASIC2.7□□□□□ -1.98
CDH13P55290 RNU6-1127P-201ENST00000384580 107 ntBASIC2.7□□□□□ -1.98
CDH13P55290 AL591416.1-201ENST00000404015 867 ntBASIC2.7□□□□□ -1.98
CDH13P55290 RAP1BP3-201ENST00000407180 549 ntBASIC2.7□□□□□ -1.98
CDH13P55290 UBE2V1P10-201ENST00000414685 269 ntBASIC2.7□□□□□ -1.98
CDH13P55290 RPL35AP12-201ENST00000425362 338 ntBASIC2.7□□□□□ -1.98
CDH13P55290 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.7□□□□□ -1.98
CDH13P55290 AC016691.1-201ENST00000441321 413 ntBASIC2.7□□□□□ -1.98
CDH13P55290 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC2.7□□□□□ -1.98
CDH13P55290 MRPL50P4-201ENST00000446432 475 ntBASIC2.7□□□□□ -1.98
CDH13P55290 FDX1P2-201ENST00000450769 375 ntBASIC2.7□□□□□ -1.98
CDH13P55290 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC2.7□□□□□ -1.98
CDH13P55290 AL441985.1-201ENST00000457727 251 ntBASIC2.7□□□□□ -1.98
CDH13P55290 MTAPP1-201ENST00000489154 819 ntBASIC2.7□□□□□ -1.98
CDH13P55290 AC083906.5-201ENST00000503722 328 ntBASIC2.7□□□□□ -1.98
CDH13P55290 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC2.7□□□□□ -1.98
CDH13P55290 AC074344.1-201ENST00000512823 224 ntBASIC2.7□□□□□ -1.98
CDH13P55290 SCARNA17.1-201ENST00000516211 143 ntBASIC2.7□□□□□ -1.98
CDH13P55290 RNA5SP341-201ENST00000516261 117 ntBASIC2.7□□□□□ -1.98
CDH13P55290 SCARNA17.2-201ENST00000516334 143 ntBASIC2.7□□□□□ -1.98
CDH13P55290 RNU6-506P-201ENST00000516553 94 ntBASIC2.7□□□□□ -1.98
CDH13P55290 SCARNA13-201ENST00000516672 275 ntBASIC2.7□□□□□ -1.98
CDH13P55290 RNU6-826P-201ENST00000516827 104 ntBASIC2.7□□□□□ -1.98
CDH13P55290 RNU6-56P-201ENST00000516986 93 ntBASIC2.7□□□□□ -1.98
CDH13P55290 ACA59.2-201ENST00000517061 156 ntBASIC2.7□□□□□ -1.98
CDH13P55290 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC2.7□□□□□ -1.98
CDH13P55290 MTCO3P23-201ENST00000561363 289 ntBASIC2.7□□□□□ -1.98
CDH13P55290 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC2.7□□□□□ -1.98
CDH13P55290 MIR3941-201ENST00000582572 103 ntBASIC2.7□□□□□ -1.98
CDH13P55290 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
CDH13P55290 SCARNA17.4-201ENST00000614296 143 ntBASIC2.7□□□□□ -1.98
CDH13P55290 AC068792.1-201ENST00000621354 417 ntBASIC2.7□□□□□ -1.98
CDH13P55290 SCARNA4-202ENST00000625402 129 ntBASIC2.7□□□□□ -1.98
CDH13P55290 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.7□□□□□ -1.98
CDH13P55290 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
CDH13P55290 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.7□□□□□ -1.98
CDH13P55290 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
CDH13P55290 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
CDH13P55290 AC026241.1-201ENST00000517873 2142 ntBASIC2.69□□□□□ -1.98
CDH13P55290 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.69□□□□□ -1.98
CDH13P55290 MIR26A1-201ENST00000362205 77 ntBASIC2.69□□□□□ -1.98
CDH13P55290 Y_RNA.333-201ENST00000365274 102 ntBASIC2.69□□□□□ -1.98
CDH13P55290 Y_RNA.399-201ENST00000383955 105 ntBASIC2.69□□□□□ -1.98
CDH13P55290 RNU6-72P-201ENST00000384285 79 ntBASIC2.69□□□□□ -1.98
CDH13P55290 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
CDH13P55290 SNORA48.5-201ENST00000391143 135 ntBASIC2.69□□□□□ -1.98
CDH13P55290 RPL21P75-201ENST00000396599 483 ntBASIC2.69□□□□□ -1.98
CDH13P55290 CALM2P3-201ENST00000400429 449 ntBASIC2.69□□□□□ -1.98
CDH13P55290 RPL21P28-201ENST00000401418 483 ntBASIC2.69□□□□□ -1.98
CDH13P55290 AL592114.1-201ENST00000403842 483 ntBASIC2.69□□□□□ -1.98
CDH13P55290 RNU6ATAC10P-201ENST00000408635 111 ntBASIC2.69□□□□□ -1.98
CDH13P55290 RNU2-3P-201ENST00000410144 191 ntBASIC2.69□□□□□ -1.98
CDH13P55290 RNA5SP492-201ENST00000411330 114 ntBASIC2.69□□□□□ -1.98
CDH13P55290 AC016831.2-201ENST00000417179 352 ntBASIC2.69□□□□□ -1.98
CDH13P55290 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC2.69□□□□□ -1.98
CDH13P55290 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC2.69□□□□□ -1.98
CDH13P55290 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC2.69□□□□□ -1.98
CDH13P55290 MTND1P34-201ENST00000438556 671 ntBASIC2.69□□□□□ -1.98
CDH13P55290 RPS3AP12-201ENST00000443616 753 ntBASIC2.69□□□□□ -1.98
CDH13P55290 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC2.69□□□□□ -1.98
CDH13P55290 CACYBPP2-201ENST00000453625 678 ntBASIC2.69□□□□□ -1.98
CDH13P55290 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC2.69□□□□□ -1.98
CDH13P55290 RPL21P39-201ENST00000463605 483 ntBASIC2.69□□□□□ -1.98
CDH13P55290 RPL21P93-201ENST00000480465 489 ntBASIC2.69□□□□□ -1.98
CDH13P55290 AC087190.1-201ENST00000484462 480 ntBASIC2.69□□□□□ -1.98
CDH13P55290 AC093591.1-201ENST00000491435 481 ntBASIC2.69□□□□□ -1.98
CDH13P55290 RPL21P16-201ENST00000495531 483 ntBASIC2.69□□□□□ -1.98
CDH13P55290 AC019235.1-201ENST00000503847 207 ntBASIC2.69□□□□□ -1.98
CDH13P55290 MTCO3P9-201ENST00000506989 781 ntBASIC2.69□□□□□ -1.98
CDH13P55290 MTND3P25-201ENST00000509243 135 ntBASIC2.69□□□□□ -1.98
CDH13P55290 RNU1-86P-201ENST00000516108 154 ntBASIC2.69□□□□□ -1.98
CDH13P55290 RNU1-107P-201ENST00000516617 154 ntBASIC2.69□□□□□ -1.98
CDH13P55290 SNORA70.24-201ENST00000517233 118 ntBASIC2.69□□□□□ -1.98
CDH13P55290 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC2.69□□□□□ -1.98
CDH13P55290 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC2.69□□□□□ -1.98
CDH13P55290 AP004607.1-201ENST00000524456 203 ntBASIC2.69□□□□□ -1.98
CDH13P55290 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC2.69□□□□□ -1.98
CDH13P55290 ELOCP31-201ENST00000540463 467 ntBASIC2.69□□□□□ -1.98
CDH13P55290 HIF1AP1-201ENST00000553642 175 ntBASIC2.69□□□□□ -1.98
CDH13P55290 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC2.69□□□□□ -1.98
CDH13P55290 BNIP3P30-201ENST00000601184 574 ntBASIC2.69□□□□□ -1.98
CDH13P55290 AC024153.1-201ENST00000603103 365 ntBASIC2.69□□□□□ -1.98
CDH13P55290 AP000787.2-201ENST00000604432 568 ntBASIC2.69□□□□□ -1.98
CDH13P55290 AL442067.2-201ENST00000614033 363 ntBASIC2.69□□□□□ -1.98
CDH13P55290 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC2.69□□□□□ -1.98
CDH13P55290 MIR8057-201ENST00000620957 69 ntBASIC2.69□□□□□ -1.98
CDH13P55290 AC022418.1-201ENST00000624118 445 ntBASIC2.69□□□□□ -1.98
CDH13P55290 PCNP-208ENST00000627393 136 ntTSL 2 BASIC2.69□□□□□ -1.98
CDH13P55290 MIR7515-201ENST00000637837 67 ntBASIC2.69□□□□□ -1.98
CDH13P55290 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
CDH13P55290 AC096644.4-201ENST00000563417 2912 ntBASIC2.69□□□□□ -1.98
CDH13P55290 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.68□□□□□ -1.98
CDH13P55290 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.68□□□□□ -1.98
CDH13P55290 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.68□□□□□ -1.98
CDH13P55290 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
CDH13P55290 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.68□□□□□ -1.98
CDH13P55290 SNORA18.3-201ENST00000384122 132 ntBASIC2.68□□□□□ -1.98
CDH13P55290 Y_RNA.480-201ENST00000384364 102 ntBASIC2.68□□□□□ -1.98
CDH13P55290 BTF3P7-201ENST00000407097 488 ntBASIC2.68□□□□□ -1.98
CDH13P55290 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC2.68□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 105.7 ms