Protein–RNA interactions for Protein: P54709

ATP1B3, Sodium/potassium-transporting ATPase subunit beta-3, humanhuman

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1B3P54709 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC1.94□□□□□ -2.1
ATP1B3P54709 USP9YP12-201ENST00000450481 570 ntBASIC1.94□□□□□ -2.1
ATP1B3P54709 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC1.94□□□□□ -2.1
ATP1B3P54709 AC055731.1-201ENST00000474387 401 ntBASIC1.94□□□□□ -2.1
ATP1B3P54709 HMGB1P30-201ENST00000492455 606 ntBASIC1.94□□□□□ -2.1
ATP1B3P54709 AC005178.1-201ENST00000508392 440 ntBASIC1.94□□□□□ -2.1
ATP1B3P54709 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC1.94□□□□□ -2.1
ATP1B3P54709 RNU6-1129P-201ENST00000515964 104 ntBASIC1.94□□□□□ -2.1
ATP1B3P54709 RNU2-19P-201ENST00000517288 84 ntBASIC1.94□□□□□ -2.1
ATP1B3P54709 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC1.94□□□□□ -2.1
ATP1B3P54709 AC109329.1-201ENST00000518744 317 ntBASIC1.94□□□□□ -2.1
ATP1B3P54709 MTCYBP20-201ENST00000524239 1129 ntBASIC1.94□□□□□ -2.1
ATP1B3P54709 AC078899.2-201ENST00000595282 212 ntBASIC1.94□□□□□ -2.1
ATP1B3P54709 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC1.94□□□□□ -2.1
ATP1B3P54709 CLPTM1LP1-201ENST00000604519 484 ntBASIC1.94□□□□□ -2.1
ATP1B3P54709 AC021646.1-201ENST00000605469 484 ntBASIC1.94□□□□□ -2.1
ATP1B3P54709 AC026790.2-201ENST00000606282 430 ntBASIC1.94□□□□□ -2.1
ATP1B3P54709 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC1.94□□□□□ -2.1
ATP1B3P54709 MIR6840-201ENST00000611937 71 ntBASIC1.94□□□□□ -2.1
ATP1B3P54709 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC1.94□□□□□ -2.1
ATP1B3P54709 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC1.94□□□□□ -2.1
ATP1B3P54709 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC1.94□□□□□ -2.1
ATP1B3P54709 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.93□□□□□ -2.1
ATP1B3P54709 RNU6-301P-201ENST00000384277 107 ntBASIC1.93□□□□□ -2.1
ATP1B3P54709 MIR634-201ENST00000385208 97 ntBASIC1.93□□□□□ -2.1
ATP1B3P54709 MIR561-201ENST00000385216 97 ntBASIC1.93□□□□□ -2.1
ATP1B3P54709 RPL23AP32-201ENST00000395315 459 ntBASIC1.93□□□□□ -2.1
ATP1B3P54709 RPL17P50-201ENST00000396131 546 ntBASIC1.93□□□□□ -2.1
ATP1B3P54709 RNU2-39P-201ENST00000410604 198 ntBASIC1.93□□□□□ -2.1
ATP1B3P54709 HMGB3P2-201ENST00000411913 584 ntBASIC1.93□□□□□ -2.1
ATP1B3P54709 Z99497.1-201ENST00000421282 135 ntBASIC1.93□□□□□ -2.1
ATP1B3P54709 AC011233.1-201ENST00000422812 283 ntBASIC1.93□□□□□ -2.1
ATP1B3P54709 AL356583.2-201ENST00000426536 280 ntBASIC1.93□□□□□ -2.1
ATP1B3P54709 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC1.93□□□□□ -2.1
ATP1B3P54709 EPS15P1-201ENST00000448836 336 ntBASIC1.93□□□□□ -2.1
ATP1B3P54709 RPL30P6-201ENST00000475925 342 ntBASIC1.93□□□□□ -2.1
ATP1B3P54709 AC109486.1-201ENST00000486833 374 ntBASIC1.93□□□□□ -2.1
ATP1B3P54709 AC090255.1-201ENST00000495779 349 ntBASIC1.93□□□□□ -2.1
ATP1B3P54709 AC117522.1-201ENST00000509821 380 ntBASIC1.93□□□□□ -2.1
ATP1B3P54709 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC1.93□□□□□ -2.1
ATP1B3P54709 Y_RNA.672-201ENST00000516289 104 ntBASIC1.93□□□□□ -2.1
ATP1B3P54709 RNU4ATAC17P-201ENST00000517272 120 ntBASIC1.93□□□□□ -2.1
ATP1B3P54709 CR383656.8-201ENST00000549046 145 ntBASIC1.93□□□□□ -2.1
ATP1B3P54709 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC1.93□□□□□ -2.1
ATP1B3P54709 MIR4529-201ENST00000578110 78 ntBASIC1.93□□□□□ -2.1
ATP1B3P54709 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC1.93□□□□□ -2.1
ATP1B3P54709 HMGN1P30-201ENST00000589286 268 ntBASIC1.93□□□□□ -2.1
ATP1B3P54709 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC1.93□□□□□ -2.1
ATP1B3P54709 AF131215.7-201ENST00000602443 707 ntBASIC1.93□□□□□ -2.1
ATP1B3P54709 AL158032.1-201ENST00000605401 106 ntBASIC1.93□□□□□ -2.1
ATP1B3P54709 AC093788.1-201ENST00000609356 927 ntBASIC1.93□□□□□ -2.1
ATP1B3P54709 U6.42-201ENST00000618440 107 ntBASIC1.93□□□□□ -2.1
ATP1B3P54709 AC025034.2-201ENST00000623264 286 ntBASIC1.93□□□□□ -2.1
ATP1B3P54709 SCARNA4-202ENST00000625402 129 ntBASIC1.93□□□□□ -2.1
ATP1B3P54709 Clostridiales-1.3-201ENST00000637703 147 ntBASIC1.93□□□□□ -2.1
ATP1B3P54709 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC1.93□□□□□ -2.1
ATP1B3P54709 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC1.92□□□□□ -2.1
ATP1B3P54709 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
ATP1B3P54709 RNA5SP37-201ENST00000365420 130 ntBASIC1.92□□□□□ -2.1
ATP1B3P54709 SNORA25B-201ENST00000365507 128 ntBASIC1.92□□□□□ -2.1
ATP1B3P54709 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC1.92□□□□□ -2.1
ATP1B3P54709 SNORA67.4-201ENST00000384688 142 ntBASIC1.92□□□□□ -2.1
ATP1B3P54709 MIR10A-201ENST00000385043 110 ntBASIC1.92□□□□□ -2.1
ATP1B3P54709 CISD1P1-201ENST00000393907 327 ntBASIC1.92□□□□□ -2.1
ATP1B3P54709 UBE2V1P2-201ENST00000397758 440 ntBASIC1.92□□□□□ -2.1
ATP1B3P54709 RPS3AP36-201ENST00000398190 775 ntBASIC1.92□□□□□ -2.1
ATP1B3P54709 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
ATP1B3P54709 RNU2-8P-201ENST00000410727 190 ntBASIC1.92□□□□□ -2.1
ATP1B3P54709 AL031779.1-201ENST00000415663 330 ntBASIC1.92□□□□□ -2.1
ATP1B3P54709 SLC44A3-AS1-205ENST00000424505 612 ntBASIC1.92□□□□□ -2.1
ATP1B3P54709 AC008267.5-201ENST00000424928 265 ntBASIC1.92□□□□□ -2.1
ATP1B3P54709 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC1.92□□□□□ -2.1
ATP1B3P54709 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
ATP1B3P54709 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC1.92□□□□□ -2.1
ATP1B3P54709 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC1.92□□□□□ -2.1
ATP1B3P54709 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC1.92□□□□□ -2.1
ATP1B3P54709 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC1.92□□□□□ -2.1
ATP1B3P54709 AC126389.1-201ENST00000477436 290 ntBASIC1.92□□□□□ -2.1
ATP1B3P54709 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC1.92□□□□□ -2.1
ATP1B3P54709 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC1.92□□□□□ -2.1
ATP1B3P54709 RNU6-123P-201ENST00000516163 102 ntBASIC1.92□□□□□ -2.1
ATP1B3P54709 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC1.92□□□□□ -2.1
ATP1B3P54709 AP001646.1-201ENST00000527936 915 ntBASIC1.92□□□□□ -2.1
ATP1B3P54709 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
ATP1B3P54709 AC135279.1-201ENST00000543493 504 ntBASIC1.92□□□□□ -2.1
ATP1B3P54709 MIR3162-201ENST00000581818 82 ntBASIC1.92□□□□□ -2.1
ATP1B3P54709 AC090616.2-202ENST00000584248 222 ntBASIC1.92□□□□□ -2.1
ATP1B3P54709 AC007229.1-201ENST00000590455 412 ntBASIC1.92□□□□□ -2.1
ATP1B3P54709 NDUFA8P1-201ENST00000605525 367 ntBASIC1.92□□□□□ -2.1
ATP1B3P54709 AL121917.1-203ENST00000605534 577 ntBASIC1.92□□□□□ -2.1
ATP1B3P54709 AC098614.4-201ENST00000607601 462 ntBASIC1.92□□□□□ -2.1
ATP1B3P54709 MIR6132-201ENST00000622083 109 ntBASIC1.92□□□□□ -2.1
ATP1B3P54709 SCARNA15.3-201ENST00000626315 122 ntBASIC1.92□□□□□ -2.1
ATP1B3P54709 SCARNA4.1-201ENST00000628597 123 ntBASIC1.92□□□□□ -2.1
ATP1B3P54709 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC1.92□□□□□ -2.1
ATP1B3P54709 AL136360.1-201ENST00000503377 1900 ntBASIC1.91□□□□□ -2.1
ATP1B3P54709 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC1.91□□□□□ -2.1
ATP1B3P54709 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC1.91□□□□□ -2.1
ATP1B3P54709 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
ATP1B3P54709 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 98.1 ms