Protein–RNA interactions for Protein: P54253

ATXN1, Ataxin-1, humanhuman

Known RBP Predictions only

Length 815 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN1P54253 RNU6-1115P-201ENST00000362490 106 ntBASIC3.81□□□□□ -1.8
ATXN1P54253 RNU6-740P-201ENST00000364734 105 ntBASIC3.81□□□□□ -1.8
ATXN1P54253 MDM4-202ENST00000367180 547 ntTSL 3 BASIC3.81□□□□□ -1.8
ATXN1P54253 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC3.81□□□□□ -1.8
ATXN1P54253 Y_RNA.462-201ENST00000384268 102 ntBASIC3.81□□□□□ -1.8
ATXN1P54253 Y_RNA.506-201ENST00000384494 102 ntBASIC3.81□□□□□ -1.8
ATXN1P54253 MIR591-201ENST00000385290 95 ntBASIC3.81□□□□□ -1.8
ATXN1P54253 AC110754.1-201ENST00000399740 601 ntBASIC3.81□□□□□ -1.8
ATXN1P54253 UBA52P6-201ENST00000399822 382 ntBASIC3.81□□□□□ -1.8
ATXN1P54253 U3.42-201ENST00000408746 214 ntBASIC3.81□□□□□ -1.8
ATXN1P54253 OR6C66P-201ENST00000414917 930 ntBASIC3.81□□□□□ -1.8
ATXN1P54253 AL356968.1-201ENST00000416622 474 ntBASIC3.81□□□□□ -1.8
ATXN1P54253 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC3.81□□□□□ -1.8
ATXN1P54253 PPP1R11P2-201ENST00000423543 382 ntBASIC3.81□□□□□ -1.8
ATXN1P54253 AC018865.2-201ENST00000423631 129 ntBASIC3.81□□□□□ -1.8
ATXN1P54253 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC3.81□□□□□ -1.8
ATXN1P54253 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.81□□□□□ -1.8
ATXN1P54253 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC3.81□□□□□ -1.8
ATXN1P54253 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.81□□□□□ -1.8
ATXN1P54253 ERLEC1P1-201ENST00000433806 578 ntBASIC3.81□□□□□ -1.8
ATXN1P54253 AC073063.1-201ENST00000434352 607 ntBASIC3.81□□□□□ -1.8
ATXN1P54253 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC3.81□□□□□ -1.8
ATXN1P54253 RPL21P2-201ENST00000440049 481 ntBASIC3.81□□□□□ -1.8
ATXN1P54253 HMGB3P11-201ENST00000440127 604 ntBASIC3.81□□□□□ -1.8
ATXN1P54253 RPL26P6-201ENST00000440913 438 ntBASIC3.81□□□□□ -1.8
ATXN1P54253 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
ATXN1P54253 GAPDHP27-201ENST00000447427 1020 ntBASIC3.81□□□□□ -1.8
ATXN1P54253 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC3.81□□□□□ -1.8
ATXN1P54253 RPL30P15-201ENST00000457129 321 ntBASIC3.81□□□□□ -1.8
ATXN1P54253 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC3.81□□□□□ -1.8
ATXN1P54253 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC3.81□□□□□ -1.8
ATXN1P54253 SNORA70.18-201ENST00000516696 98 ntBASIC3.81□□□□□ -1.8
ATXN1P54253 AC009902.1-201ENST00000519351 183 ntBASIC3.81□□□□□ -1.8
ATXN1P54253 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC3.81□□□□□ -1.8
ATXN1P54253 EIF4BP1-201ENST00000554881 351 ntBASIC3.81□□□□□ -1.8
ATXN1P54253 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC3.81□□□□□ -1.8
ATXN1P54253 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC3.81□□□□□ -1.8
ATXN1P54253 MIR3921-201ENST00000577308 85 ntBASIC3.81□□□□□ -1.8
ATXN1P54253 MIR4474-201ENST00000579189 78 ntBASIC3.81□□□□□ -1.8
ATXN1P54253 AL670379.10-201ENST00000604330 253 ntBASIC3.81□□□□□ -1.8
ATXN1P54253 AL670379.9-201ENST00000605428 253 ntBASIC3.81□□□□□ -1.8
ATXN1P54253 YPEL5P2-201ENST00000605553 359 ntBASIC3.81□□□□□ -1.8
ATXN1P54253 HMGB1P50-201ENST00000605814 607 ntBASIC3.81□□□□□ -1.8
ATXN1P54253 AC011155.2-201ENST00000623202 216 ntBASIC3.81□□□□□ -1.8
ATXN1P54253 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC3.81□□□□□ -1.8
ATXN1P54253 AL512643.1-201ENST00000635735 524 ntBASIC3.81□□□□□ -1.8
ATXN1P54253 MIR4275-201ENST00000636486 87 ntBASIC3.81□□□□□ -1.8
ATXN1P54253 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.81□□□□□ -1.8
ATXN1P54253 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
ATXN1P54253 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
ATXN1P54253 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.8□□□□□ -1.8
ATXN1P54253 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.8□□□□□ -1.8
ATXN1P54253 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.8□□□□□ -1.8
ATXN1P54253 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC3.8□□□□□ -1.8
ATXN1P54253 AL139276.1-201ENST00000311910 1001 ntBASIC3.8□□□□□ -1.8
ATXN1P54253 RNU6-1290P-201ENST00000362957 109 ntBASIC3.8□□□□□ -1.8
ATXN1P54253 RNU4-66P-201ENST00000365199 138 ntBASIC3.8□□□□□ -1.8
ATXN1P54253 RNU6-61P-201ENST00000365528 109 ntBASIC3.8□□□□□ -1.8
ATXN1P54253 Y_RNA.364-201ENST00000365532 101 ntBASIC3.8□□□□□ -1.8
ATXN1P54253 RNU6-76P-201ENST00000384060 104 ntBASIC3.8□□□□□ -1.8
ATXN1P54253 Y_RNA.455-201ENST00000384230 98 ntBASIC3.8□□□□□ -1.8
ATXN1P54253 RNY1P14-201ENST00000384426 108 ntBASIC3.8□□□□□ -1.8
ATXN1P54253 Y_RNA.496-201ENST00000384444 101 ntBASIC3.8□□□□□ -1.8
ATXN1P54253 Y_RNA.556-201ENST00000384677 113 ntBASIC3.8□□□□□ -1.8
ATXN1P54253 AL138878.1-201ENST00000405131 347 ntBASIC3.8□□□□□ -1.8
ATXN1P54253 MIR548F5-201ENST00000408421 86 ntBASIC3.8□□□□□ -1.8
ATXN1P54253 MIR1290-201ENST00000408735 78 ntBASIC3.8□□□□□ -1.8
ATXN1P54253 RNU2-38P-201ENST00000410856 79 ntBASIC3.8□□□□□ -1.8
ATXN1P54253 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC3.8□□□□□ -1.8
ATXN1P54253 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC3.8□□□□□ -1.8
ATXN1P54253 HSPE1P1-201ENST00000421494 318 ntBASIC3.8□□□□□ -1.8
ATXN1P54253 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC3.8□□□□□ -1.8
ATXN1P54253 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC3.8□□□□□ -1.8
ATXN1P54253 AL118520.1-201ENST00000450770 291 ntBASIC3.8□□□□□ -1.8
ATXN1P54253 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC3.8□□□□□ -1.8
ATXN1P54253 RNA5SP310-201ENST00000459084 116 ntBASIC3.8□□□□□ -1.8
ATXN1P54253 AC128713.1-201ENST00000471495 306 ntBASIC3.8□□□□□ -1.8
ATXN1P54253 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC3.8□□□□□ -1.8
ATXN1P54253 RPL21P99-201ENST00000480369 423 ntBASIC3.8□□□□□ -1.8
ATXN1P54253 AC108078.2-201ENST00000510750 236 ntBASIC3.8□□□□□ -1.8
ATXN1P54253 AC008489.1-201ENST00000524271 483 ntBASIC3.8□□□□□ -1.8
ATXN1P54253 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC3.8□□□□□ -1.8
ATXN1P54253 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC3.8□□□□□ -1.8
ATXN1P54253 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC3.8□□□□□ -1.8
ATXN1P54253 AC020914.4-201ENST00000597690 277 ntBASIC3.8□□□□□ -1.8
ATXN1P54253 AC104763.2-201ENST00000604179 382 ntBASIC3.8□□□□□ -1.8
ATXN1P54253 AC008962.1-201ENST00000605729 304 ntBASIC3.8□□□□□ -1.8
ATXN1P54253 AC002076.2-201ENST00000617362 122 ntBASIC3.8□□□□□ -1.8
ATXN1P54253 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC3.8□□□□□ -1.8
ATXN1P54253 AP000553.6-201ENST00000641242 118 ntBASIC3.8□□□□□ -1.8
ATXN1P54253 AL732372.2-225ENST00000642124 456 ntBASIC3.8□□□□□ -1.8
ATXN1P54253 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
ATXN1P54253 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
ATXN1P54253 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
ATXN1P54253 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
ATXN1P54253 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
ATXN1P54253 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
ATXN1P54253 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC3.79□□□□□ -1.8
ATXN1P54253 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC3.79□□□□□ -1.8
ATXN1P54253 CUL1P1-201ENST00000509510 2425 ntBASIC3.79□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 140.4 ms