Protein–RNA interactions for Protein: P52954

LBX1, Transcription factor LBX1, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LBX1P52954 FAM35CP-201ENST00000554755 2470 ntBASIC2.78□□□□□ -1.96
LBX1P52954 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.77□□□□□ -1.97
LBX1P52954 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC2.77□□□□□ -1.97
LBX1P52954 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
LBX1P52954 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.77□□□□□ -1.97
LBX1P52954 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.77□□□□□ -1.97
LBX1P52954 Y_RNA.1-201ENST00000352915 104 ntBASIC2.77□□□□□ -1.97
LBX1P52954 SNORD56.3-201ENST00000363507 71 ntBASIC2.77□□□□□ -1.97
LBX1P52954 RNY1P12-201ENST00000364251 105 ntBASIC2.77□□□□□ -1.97
LBX1P52954 RNU6-192P-201ENST00000391253 100 ntBASIC2.77□□□□□ -1.97
LBX1P52954 CALM2P3-201ENST00000400429 449 ntBASIC2.77□□□□□ -1.97
LBX1P52954 RNA5SP38-201ENST00000410750 119 ntBASIC2.77□□□□□ -1.97
LBX1P52954 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC2.77□□□□□ -1.97
LBX1P52954 MTCYBP5-201ENST00000423752 1135 ntBASIC2.77□□□□□ -1.97
LBX1P52954 AL356010.1-201ENST00000456364 102 ntBASIC2.77□□□□□ -1.97
LBX1P52954 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC2.77□□□□□ -1.97
LBX1P52954 RNU6-420P-201ENST00000458780 107 ntBASIC2.77□□□□□ -1.97
LBX1P52954 AC107401.1-201ENST00000503426 685 ntBASIC2.77□□□□□ -1.97
LBX1P52954 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC2.77□□□□□ -1.97
LBX1P52954 AP001893.2-201ENST00000526949 202 ntBASIC2.77□□□□□ -1.97
LBX1P52954 ZDHHC20P3-201ENST00000531576 336 ntBASIC2.77□□□□□ -1.97
LBX1P52954 AC016957.1-201ENST00000534895 309 ntBASIC2.77□□□□□ -1.97
LBX1P52954 SNRPGP18-201ENST00000553000 214 ntBASIC2.77□□□□□ -1.97
LBX1P52954 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC2.77□□□□□ -1.97
LBX1P52954 AC005951.1-201ENST00000576706 485 ntBASIC2.77□□□□□ -1.97
LBX1P52954 MIR4506-201ENST00000584693 77 ntBASIC2.77□□□□□ -1.97
LBX1P52954 AC002545.1-201ENST00000592511 181 ntBASIC2.77□□□□□ -1.97
LBX1P52954 AC002076.2-201ENST00000617362 122 ntBASIC2.77□□□□□ -1.97
LBX1P52954 MIR6076-201ENST00000617521 113 ntBASIC2.77□□□□□ -1.97
LBX1P52954 U2.21-201ENST00000637295 81 ntBASIC2.77□□□□□ -1.97
LBX1P52954 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
LBX1P52954 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
LBX1P52954 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC2.77□□□□□ -1.97
LBX1P52954 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.76□□□□□ -1.97
LBX1P52954 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
LBX1P52954 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
LBX1P52954 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC2.76□□□□□ -1.97
LBX1P52954 RNU6-1120P-201ENST00000362988 108 ntBASIC2.76□□□□□ -1.97
LBX1P52954 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC2.76□□□□□ -1.97
LBX1P52954 MIR325-201ENST00000385260 98 ntBASIC2.76□□□□□ -1.97
LBX1P52954 RNU1-101P-201ENST00000391171 127 ntBASIC2.76□□□□□ -1.97
LBX1P52954 RPL21P3-201ENST00000395517 478 ntBASIC2.76□□□□□ -1.97
LBX1P52954 AC092809.3-201ENST00000415453 231 ntBASIC2.76□□□□□ -1.97
LBX1P52954 AC114491.1-201ENST00000416095 246 ntBASIC2.76□□□□□ -1.97
LBX1P52954 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
LBX1P52954 ELOCP14-201ENST00000428070 331 ntBASIC2.76□□□□□ -1.97
LBX1P52954 AL512844.2-201ENST00000433990 593 ntBASIC2.76□□□□□ -1.97
LBX1P52954 ELOCP7-201ENST00000439968 331 ntBASIC2.76□□□□□ -1.97
LBX1P52954 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC2.76□□□□□ -1.97
LBX1P52954 MTND2P24-201ENST00000453434 806 ntBASIC2.76□□□□□ -1.97
LBX1P52954 RPL21P41-201ENST00000459863 264 ntBASIC2.76□□□□□ -1.97
LBX1P52954 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC2.76□□□□□ -1.97
LBX1P52954 RPL9P33-201ENST00000484311 566 ntBASIC2.76□□□□□ -1.97
LBX1P52954 AL160314.1-201ENST00000490836 438 ntBASIC2.76□□□□□ -1.97
LBX1P52954 SUMO2P6-201ENST00000505273 288 ntBASIC2.76□□□□□ -1.97
LBX1P52954 AC116562.3-201ENST00000506136 177 ntBASIC2.76□□□□□ -1.97
LBX1P52954 AC117522.1-201ENST00000509821 380 ntBASIC2.76□□□□□ -1.97
LBX1P52954 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC2.76□□□□□ -1.97
LBX1P52954 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC2.76□□□□□ -1.97
LBX1P52954 MTCYBP20-201ENST00000524239 1129 ntBASIC2.76□□□□□ -1.97
LBX1P52954 AC068587.5-201ENST00000528506 175 ntBASIC2.76□□□□□ -1.97
LBX1P52954 AC084851.1-201ENST00000529105 249 ntBASIC2.76□□□□□ -1.97
LBX1P52954 AP005435.4-201ENST00000529514 284 ntBASIC2.76□□□□□ -1.97
LBX1P52954 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC2.76□□□□□ -1.97
LBX1P52954 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC2.76□□□□□ -1.97
LBX1P52954 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC2.76□□□□□ -1.97
LBX1P52954 MIR4775-201ENST00000581168 75 ntBASIC2.76□□□□□ -1.97
LBX1P52954 AC005046.1-201ENST00000608515 625 ntBASIC2.76□□□□□ -1.97
LBX1P52954 AC012409.4-201ENST00000612923 249 ntBASIC2.76□□□□□ -1.97
LBX1P52954 MIR6845-201ENST00000613182 61 ntBASIC2.76□□□□□ -1.97
LBX1P52954 AC073534.2-201ENST00000620377 381 ntBASIC2.76□□□□□ -1.97
LBX1P52954 AL589994.2-201ENST00000621124 579 ntBASIC2.76□□□□□ -1.97
LBX1P52954 AC010338.1-201ENST00000621823 717 ntBASIC2.76□□□□□ -1.97
LBX1P52954 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
LBX1P52954 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
LBX1P52954 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC2.75□□□□□ -1.97
LBX1P52954 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC2.75□□□□□ -1.97
LBX1P52954 Y_RNA.296-201ENST00000364930 108 ntBASIC2.75□□□□□ -1.97
LBX1P52954 RNU4-48P-201ENST00000365559 182 ntBASIC2.75□□□□□ -1.97
LBX1P52954 RNU6-1035P-201ENST00000384477 107 ntBASIC2.75□□□□□ -1.97
LBX1P52954 MTCO3P40-201ENST00000392516 676 ntBASIC2.75□□□□□ -1.97
LBX1P52954 AC068050.1-201ENST00000394891 380 ntBASIC2.75□□□□□ -1.97
LBX1P52954 Y_RNA.599-201ENST00000410489 109 ntBASIC2.75□□□□□ -1.97
LBX1P52954 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC2.75□□□□□ -1.97
LBX1P52954 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC2.75□□□□□ -1.97
LBX1P52954 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC2.75□□□□□ -1.97
LBX1P52954 AL591704.1-201ENST00000432574 275 ntBASIC2.75□□□□□ -1.97
LBX1P52954 AC002486.1-201ENST00000435098 391 ntBASIC2.75□□□□□ -1.97
LBX1P52954 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
LBX1P52954 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC2.75□□□□□ -1.97
LBX1P52954 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC2.75□□□□□ -1.97
LBX1P52954 AC022364.2-201ENST00000457963 554 ntBASIC2.75□□□□□ -1.97
LBX1P52954 AC023194.1-201ENST00000493084 308 ntBASIC2.75□□□□□ -1.97
LBX1P52954 FAM92A1P2-202ENST00000504766 877 ntBASIC2.75□□□□□ -1.97
LBX1P52954 MIR449C-201ENST00000516047 92 ntBASIC2.75□□□□□ -1.97
LBX1P52954 SNORA40.12-201ENST00000516329 111 ntBASIC2.75□□□□□ -1.97
LBX1P52954 AC245505.1-201ENST00000556398 224 ntBASIC2.75□□□□□ -1.97
LBX1P52954 MTCO3P24-201ENST00000572729 782 ntBASIC2.75□□□□□ -1.97
LBX1P52954 AC008521.1-201ENST00000587471 187 ntBASIC2.75□□□□□ -1.97
LBX1P52954 AP003465.2-201ENST00000602571 373 ntBASIC2.75□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 134.9 ms