Protein–RNA interactions for Protein: P52701

MSH6, DNA mismatch repair protein Msh6, humanhuman

Predictions only

Length 1,360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6P52701 AL030996.1-201ENST00000411430 235 ntBASIC2.19□□□□□ -2.06
MSH6P52701 BX510359.4-201ENST00000423750 193 ntBASIC2.19□□□□□ -2.06
MSH6P52701 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC2.19□□□□□ -2.06
MSH6P52701 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC2.19□□□□□ -2.06
MSH6P52701 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC2.19□□□□□ -2.06
MSH6P52701 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC2.19□□□□□ -2.06
MSH6P52701 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC2.19□□□□□ -2.06
MSH6P52701 CECR9-201ENST00000453421 199 ntBASIC2.19□□□□□ -2.06
MSH6P52701 RPL26P9-201ENST00000457466 433 ntBASIC2.19□□□□□ -2.06
MSH6P52701 AC090515.1-201ENST00000465295 476 ntBASIC2.19□□□□□ -2.06
MSH6P52701 RPL23AP41-201ENST00000484754 458 ntBASIC2.19□□□□□ -2.06
MSH6P52701 RN7SL274P-201ENST00000492268 272 ntBASIC2.19□□□□□ -2.06
MSH6P52701 SRP72-202ENST00000504757 745 ntTSL 2 BASIC2.19□□□□□ -2.06
MSH6P52701 MRPS36P2-201ENST00000512569 299 ntBASIC2.19□□□□□ -2.06
MSH6P52701 SNORA31.3-201ENST00000516029 96 ntBASIC2.19□□□□□ -2.06
MSH6P52701 MIR449C-201ENST00000516047 92 ntBASIC2.19□□□□□ -2.06
MSH6P52701 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC2.19□□□□□ -2.06
MSH6P52701 OR5AQ1P-201ENST00000527596 927 ntBASIC2.19□□□□□ -2.06
MSH6P52701 VBP1-203ENST00000535916 944 ntTSL 2 BASIC2.19□□□□□ -2.06
MSH6P52701 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC2.19□□□□□ -2.06
MSH6P52701 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
MSH6P52701 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC2.19□□□□□ -2.06
MSH6P52701 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC2.19□□□□□ -2.06
MSH6P52701 AC105148.1-201ENST00000604961 409 ntBASIC2.19□□□□□ -2.06
MSH6P52701 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC2.19□□□□□ -2.06
MSH6P52701 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
MSH6P52701 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC2.19□□□□□ -2.06
MSH6P52701 AL031667.3-201ENST00000620124 655 ntBASIC2.19□□□□□ -2.06
MSH6P52701 PVT1_3.1-201ENST00000620853 95 ntBASIC2.19□□□□□ -2.06
MSH6P52701 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC2.19□□□□□ -2.06
MSH6P52701 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
MSH6P52701 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
MSH6P52701 MTND4P16-201ENST00000466108 1367 ntBASIC2.18□□□□□ -2.06
MSH6P52701 AC080100.1-201ENST00000624239 5356 ntBASIC2.18□□□□□ -2.06
MSH6P52701 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.18□□□□□ -2.06
MSH6P52701 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC2.18□□□□□ -2.06
MSH6P52701 RNU6-778P-201ENST00000363269 103 ntBASIC2.18□□□□□ -2.06
MSH6P52701 BTF3L4P3-201ENST00000418879 476 ntBASIC2.18□□□□□ -2.06
MSH6P52701 SKA2P1-201ENST00000425592 390 ntBASIC2.18□□□□□ -2.06
MSH6P52701 PGBD4P3-201ENST00000440731 581 ntBASIC2.18□□□□□ -2.06
MSH6P52701 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC2.18□□□□□ -2.06
MSH6P52701 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
MSH6P52701 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC2.18□□□□□ -2.06
MSH6P52701 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2.18□□□□□ -2.06
MSH6P52701 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC2.18□□□□□ -2.06
MSH6P52701 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC2.18□□□□□ -2.06
MSH6P52701 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC2.18□□□□□ -2.06
MSH6P52701 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC2.18□□□□□ -2.06
MSH6P52701 AL355877.2-201ENST00000603670 358 ntBASIC2.18□□□□□ -2.06
MSH6P52701 AL161798.1-201ENST00000604630 131 ntBASIC2.18□□□□□ -2.06
MSH6P52701 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC2.18□□□□□ -2.06
MSH6P52701 TUSC7.1-201ENST00000610969 165 ntBASIC2.18□□□□□ -2.06
MSH6P52701 AC021755.4-201ENST00000616620 456 ntBASIC2.18□□□□□ -2.06
MSH6P52701 MIR6515-201ENST00000619843 57 ntBASIC2.18□□□□□ -2.06
MSH6P52701 AC068787.1-201ENST00000623908 691 ntBASIC2.18□□□□□ -2.06
MSH6P52701 AC091895.1-201ENST00000624494 256 ntBASIC2.18□□□□□ -2.06
MSH6P52701 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC2.18□□□□□ -2.06
MSH6P52701 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC2.18□□□□□ -2.06
MSH6P52701 RNU5A-8P-201ENST00000364102 114 ntBASIC2.17□□□□□ -2.06
MSH6P52701 RNU6-1072P-201ENST00000384703 107 ntBASIC2.17□□□□□ -2.06
MSH6P52701 RNU6-443P-201ENST00000384780 107 ntBASIC2.17□□□□□ -2.06
MSH6P52701 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
MSH6P52701 RNU6-750P-201ENST00000390946 107 ntBASIC2.17□□□□□ -2.06
MSH6P52701 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC2.17□□□□□ -2.06
MSH6P52701 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC2.17□□□□□ -2.06
MSH6P52701 ZNF90P2-204ENST00000419323 1075 ntBASIC2.17□□□□□ -2.06
MSH6P52701 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC2.17□□□□□ -2.06
MSH6P52701 ISCA1P1-201ENST00000426679 387 ntBASIC2.17□□□□□ -2.06
MSH6P52701 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC2.17□□□□□ -2.06
MSH6P52701 TIMM9P1-201ENST00000436122 256 ntBASIC2.17□□□□□ -2.06
MSH6P52701 RPS15AP5-201ENST00000436276 388 ntBASIC2.17□□□□□ -2.06
MSH6P52701 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC2.17□□□□□ -2.06
MSH6P52701 OR6C5P-201ENST00000452388 923 ntBASIC2.17□□□□□ -2.06
MSH6P52701 AC108059.3-201ENST00000456388 214 ntBASIC2.17□□□□□ -2.06
MSH6P52701 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC2.17□□□□□ -2.06
MSH6P52701 RNU6-1003P-201ENST00000517099 105 ntBASIC2.17□□□□□ -2.06
MSH6P52701 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC2.17□□□□□ -2.06
MSH6P52701 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC2.17□□□□□ -2.06
MSH6P52701 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC2.17□□□□□ -2.06
MSH6P52701 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC2.17□□□□□ -2.06
MSH6P52701 OR1M4P-201ENST00000589199 287 ntBASIC2.17□□□□□ -2.06
MSH6P52701 DPPA3P3-201ENST00000603842 430 ntBASIC2.17□□□□□ -2.06
MSH6P52701 AC018714.1-201ENST00000605028 208 ntBASIC2.17□□□□□ -2.06
MSH6P52701 AC107214.2-201ENST00000608204 634 ntBASIC2.17□□□□□ -2.06
MSH6P52701 AP000240.1-201ENST00000609910 452 ntBASIC2.17□□□□□ -2.06
MSH6P52701 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC2.17□□□□□ -2.06
MSH6P52701 AC079416.3-201ENST00000624479 549 ntBASIC2.17□□□□□ -2.06
MSH6P52701 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC2.17□□□□□ -2.06
MSH6P52701 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.16□□□□□ -2.06
MSH6P52701 MIR96-201ENST00000362288 78 ntBASIC2.16□□□□□ -2.06
MSH6P52701 Y_RNA.46-201ENST00000362695 102 ntBASIC2.16□□□□□ -2.06
MSH6P52701 SNORA72.3-201ENST00000365074 132 ntBASIC2.16□□□□□ -2.06
MSH6P52701 Y_RNA.354-201ENST00000365448 111 ntBASIC2.16□□□□□ -2.06
MSH6P52701 RNU1-52P-201ENST00000384190 164 ntBASIC2.16□□□□□ -2.06
MSH6P52701 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC2.16□□□□□ -2.06
MSH6P52701 NDUFS5P4-201ENST00000412983 318 ntBASIC2.16□□□□□ -2.06
MSH6P52701 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC2.16□□□□□ -2.06
MSH6P52701 AL445687.1-201ENST00000439946 251 ntBASIC2.16□□□□□ -2.06
MSH6P52701 MTND2P14-201ENST00000482139 351 ntBASIC2.16□□□□□ -2.06
MSH6P52701 RPS27AP10-201ENST00000496103 208 ntBASIC2.16□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 108.5 ms