Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 ELOCP24-201ENST00000456370 334 ntBASIC3.07□□□□□ -1.92
SOX2P48431 AC018437.1-201ENST00000492214 406 ntBASIC3.07□□□□□ -1.92
SOX2P48431 MTCYBP40-201ENST00000509390 1135 ntBASIC3.07□□□□□ -1.92
SOX2P48431 AC026782.1-201ENST00000512952 449 ntBASIC3.07□□□□□ -1.92
SOX2P48431 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC3.07□□□□□ -1.92
SOX2P48431 AC093303.1-201ENST00000514549 295 ntBASIC3.07□□□□□ -1.92
SOX2P48431 RNU6-1183P-201ENST00000517054 60 ntBASIC3.07□□□□□ -1.92
SOX2P48431 AC109479.2-201ENST00000517842 174 ntBASIC3.07□□□□□ -1.92
SOX2P48431 IGHV3-76-201ENST00000522465 295 ntBASIC3.07□□□□□ -1.92
SOX2P48431 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC3.07□□□□□ -1.92
SOX2P48431 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.07□□□□□ -1.92
SOX2P48431 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC3.07□□□□□ -1.92
SOX2P48431 MIR3609-201ENST00000582661 80 ntBASIC3.07□□□□□ -1.92
SOX2P48431 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC3.07□□□□□ -1.92
SOX2P48431 AP000654.2-201ENST00000605633 586 ntBASIC3.07□□□□□ -1.92
SOX2P48431 SNORA51-201ENST00000606420 132 ntBASIC3.07□□□□□ -1.92
SOX2P48431 RNU1-30P-201ENST00000606575 163 ntBASIC3.07□□□□□ -1.92
SOX2P48431 AC092628.2-201ENST00000622492 339 ntBASIC3.07□□□□□ -1.92
SOX2P48431 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
SOX2P48431 AC134503.1-201ENST00000633048 54 ntBASIC3.07□□□□□ -1.92
SOX2P48431 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
SOX2P48431 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.07□□□□□ -1.92
SOX2P48431 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
SOX2P48431 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
SOX2P48431 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.07□□□□□ -1.92
SOX2P48431 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
SOX2P48431 MTND5P10-201ENST00000603719 1809 ntBASIC3.07□□□□□ -1.92
SOX2P48431 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
SOX2P48431 SRP72P2-201ENST00000344851 1979 ntBASIC3.07□□□□□ -1.92
SOX2P48431 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.07□□□□□ -1.92
SOX2P48431 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
SOX2P48431 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
SOX2P48431 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
SOX2P48431 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.06□□□□□ -1.92
SOX2P48431 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
SOX2P48431 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
SOX2P48431 MIR369-201ENST00000362155 70 ntBASIC3.06□□□□□ -1.92
SOX2P48431 Y_RNA.151-201ENST00000363566 112 ntBASIC3.06□□□□□ -1.92
SOX2P48431 SNORD42.2-201ENST00000365570 69 ntBASIC3.06□□□□□ -1.92
SOX2P48431 MIR517A-201ENST00000385001 87 ntBASIC3.06□□□□□ -1.92
SOX2P48431 SNORA48.8-201ENST00000391324 134 ntBASIC3.06□□□□□ -1.92
SOX2P48431 AL590004.1-201ENST00000405321 300 ntBASIC3.06□□□□□ -1.92
SOX2P48431 Y_RNA.594-201ENST00000410373 140 ntBASIC3.06□□□□□ -1.92
SOX2P48431 AL030996.1-201ENST00000411430 235 ntBASIC3.06□□□□□ -1.92
SOX2P48431 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC3.06□□□□□ -1.92
SOX2P48431 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC3.06□□□□□ -1.92
SOX2P48431 HMGN2P20-201ENST00000437531 273 ntBASIC3.06□□□□□ -1.92
SOX2P48431 MTCYBP6-201ENST00000441810 138 ntBASIC3.06□□□□□ -1.92
SOX2P48431 SSXP4-201ENST00000451349 245 ntBASIC3.06□□□□□ -1.92
SOX2P48431 PCMTD1P1-201ENST00000455560 355 ntBASIC3.06□□□□□ -1.92
SOX2P48431 SNORD5.1-201ENST00000458800 75 ntBASIC3.06□□□□□ -1.92
SOX2P48431 Y_RNA.639-201ENST00000458981 102 ntBASIC3.06□□□□□ -1.92
SOX2P48431 RNU6-1037P-201ENST00000459571 107 ntBASIC3.06□□□□□ -1.92
SOX2P48431 AL133162.1-201ENST00000463228 453 ntBASIC3.06□□□□□ -1.92
SOX2P48431 RN7SL594P-201ENST00000470590 287 ntBASIC3.06□□□□□ -1.92
SOX2P48431 RN7SL442P-201ENST00000473804 320 ntBASIC3.06□□□□□ -1.92
SOX2P48431 RPL23AP45-201ENST00000476406 468 ntBASIC3.06□□□□□ -1.92
SOX2P48431 RPL30P14-201ENST00000482744 348 ntBASIC3.06□□□□□ -1.92
SOX2P48431 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC3.06□□□□□ -1.92
SOX2P48431 TRMT10BP1-201ENST00000519377 943 ntBASIC3.06□□□□□ -1.92
SOX2P48431 AC093331.1-201ENST00000521474 169 ntBASIC3.06□□□□□ -1.92
SOX2P48431 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC3.06□□□□□ -1.92
SOX2P48431 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC3.06□□□□□ -1.92
SOX2P48431 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.06□□□□□ -1.92
SOX2P48431 HIGD1AP1-201ENST00000550979 275 ntBASIC3.06□□□□□ -1.92
SOX2P48431 LINC00933-203ENST00000559812 219 ntBASIC3.06□□□□□ -1.92
SOX2P48431 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.06□□□□□ -1.92
SOX2P48431 CYCSP39-201ENST00000565821 309 ntBASIC3.06□□□□□ -1.92
SOX2P48431 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.06□□□□□ -1.92
SOX2P48431 MIR4474-201ENST00000579189 78 ntBASIC3.06□□□□□ -1.92
SOX2P48431 MIR5187-201ENST00000583479 76 ntBASIC3.06□□□□□ -1.92
SOX2P48431 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC3.06□□□□□ -1.92
SOX2P48431 AC012468.1-201ENST00000604888 430 ntBASIC3.06□□□□□ -1.92
SOX2P48431 AL121917.1-203ENST00000605534 577 ntBASIC3.06□□□□□ -1.92
SOX2P48431 AL080274.1-201ENST00000605565 220 ntBASIC3.06□□□□□ -1.92
SOX2P48431 AC009229.3-201ENST00000608056 282 ntBASIC3.06□□□□□ -1.92
SOX2P48431 AC083809.1-201ENST00000615051 472 ntBASIC3.06□□□□□ -1.92
SOX2P48431 AL161629.2-201ENST00000615347 275 ntBASIC3.06□□□□□ -1.92
SOX2P48431 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.06□□□□□ -1.92
SOX2P48431 U4.6-201ENST00000621618 127 ntBASIC3.06□□□□□ -1.92
SOX2P48431 AP003355.3-201ENST00000623465 114 ntBASIC3.06□□□□□ -1.92
SOX2P48431 AC244517.12-201ENST00000623581 663 ntBASIC3.06□□□□□ -1.92
SOX2P48431 AC073308.1-201ENST00000623696 305 ntBASIC3.06□□□□□ -1.92
SOX2P48431 SCARNA4-202ENST00000625402 129 ntBASIC3.06□□□□□ -1.92
SOX2P48431 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.06□□□□□ -1.92
SOX2P48431 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.06□□□□□ -1.92
SOX2P48431 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.06□□□□□ -1.92
SOX2P48431 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
SOX2P48431 MTCO1P12-201ENST00000414273 1543 ntBASIC3.05□□□□□ -1.92
SOX2P48431 Y_RNA.128-201ENST00000363391 112 ntBASIC3.05□□□□□ -1.92
SOX2P48431 RN7SKP280-201ENST00000364196 304 ntBASIC3.05□□□□□ -1.92
SOX2P48431 RNU6-933P-201ENST00000384424 107 ntBASIC3.05□□□□□ -1.92
SOX2P48431 RNU6-310P-201ENST00000384655 107 ntBASIC3.05□□□□□ -1.92
SOX2P48431 MIR548P-201ENST00000408336 84 ntBASIC3.05□□□□□ -1.92
SOX2P48431 RNU6-628P-201ENST00000410675 107 ntBASIC3.05□□□□□ -1.92
SOX2P48431 Y_RNA.646-201ENST00000410980 101 ntBASIC3.05□□□□□ -1.92
SOX2P48431 NDUFS5P4-201ENST00000412983 318 ntBASIC3.05□□□□□ -1.92
SOX2P48431 AC099548.1-201ENST00000421443 426 ntBASIC3.05□□□□□ -1.92
SOX2P48431 USP9YP30-201ENST00000430729 455 ntBASIC3.05□□□□□ -1.92
SOX2P48431 RPS15AP10-201ENST00000432472 382 ntBASIC3.05□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 109.2 ms