Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 GTF2IP13-201ENST00000438487 386 ntBASIC0.11□□□□□ -2.39
HTTP42858 PAXBP1P1-201ENST00000449315 447 ntBASIC0.11□□□□□ -2.39
HTTP42858 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC0.11□□□□□ -2.39
HTTP42858 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC0.11□□□□□ -2.39
HTTP42858 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC0.11□□□□□ -2.39
HTTP42858 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC0.11□□□□□ -2.39
HTTP42858 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC0.11□□□□□ -2.39
HTTP42858 AC115085.1-201ENST00000588924 229 ntBASIC0.11□□□□□ -2.39
HTTP42858 PCNAP1-202ENST00000595299 752 ntBASIC0.11□□□□□ -2.39
HTTP42858 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC0.11□□□□□ -2.39
HTTP42858 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC0.11□□□□□ -2.39
HTTP42858 UCA1.1-201ENST00000620952 75 ntBASIC0.11□□□□□ -2.39
HTTP42858 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC0.11□□□□□ -2.39
HTTP42858 AC130454.1-201ENST00000622948 401 ntBASIC0.11□□□□□ -2.39
HTTP42858 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC0.11□□□□□ -2.39
HTTP42858 MTND4P16-201ENST00000466108 1367 ntBASIC0.11□□□□□ -2.39
HTTP42858 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC0.11□□□□□ -2.39
HTTP42858 RNU6-514P-201ENST00000384208 107 ntBASIC0.11□□□□□ -2.39
HTTP42858 SNORA25-201ENST00000384384 134 ntBASIC0.11□□□□□ -2.39
HTTP42858 RNU6-272P-201ENST00000411028 104 ntBASIC0.11□□□□□ -2.39
HTTP42858 AC098614.2-201ENST00000426040 255 ntBASIC0.11□□□□□ -2.39
HTTP42858 ZNF863P-201ENST00000426746 417 ntBASIC0.11□□□□□ -2.39
HTTP42858 TRAPPC2P8-201ENST00000440676 396 ntBASIC0.11□□□□□ -2.39
HTTP42858 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC0.11□□□□□ -2.39
HTTP42858 RPS26P45-201ENST00000471748 340 ntBASIC0.11□□□□□ -2.39
HTTP42858 AC145146.1-201ENST00000496370 254 ntBASIC0.11□□□□□ -2.39
HTTP42858 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC0.11□□□□□ -2.39
HTTP42858 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC0.11□□□□□ -2.39
HTTP42858 MIR4765-201ENST00000585007 77 ntBASIC0.11□□□□□ -2.39
HTTP42858 AC018638.7-201ENST00000605836 1114 ntBASIC0.11□□□□□ -2.39
HTTP42858 AC123767.1-202ENST00000620407 817 ntBASIC0.11□□□□□ -2.39
HTTP42858 AC095031.1-201ENST00000623685 672 ntBASIC0.11□□□□□ -2.39
HTTP42858 MTND4P14-201ENST00000435799 1354 ntBASIC0.11□□□□□ -2.39
HTTP42858 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC0.1□□□□□ -2.39
HTTP42858 SNORD3E-201ENST00000362899 217 ntBASIC0.1□□□□□ -2.39
HTTP42858 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC0.1□□□□□ -2.39
HTTP42858 U6atac.2-201ENST00000408644 118 ntBASIC0.1□□□□□ -2.39
HTTP42858 MTND2P26-201ENST00000528255 1029 ntBASIC0.1□□□□□ -2.39
HTTP42858 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC0.1□□□□□ -2.39
HTTP42858 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC0.1□□□□□ -2.39
HTTP42858 AC011260.1-201ENST00000578420 472 ntBASIC0.1□□□□□ -2.39
HTTP42858 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC0.1□□□□□ -2.39
HTTP42858 Y_RNA.67-201ENST00000362870 100 ntBASIC0.1□□□□□ -2.39
HTTP42858 AC069277.1-205ENST00000432743 630 ntTSL 5 BASIC0.1□□□□□ -2.39
HTTP42858 snoU13.4-201ENST00000458916 104 ntBASIC0.1□□□□□ -2.39
HTTP42858 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC0.1□□□□□ -2.39
HTTP42858 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC0.1□□□□□ -2.39
HTTP42858 HMGB1P22-201ENST00000505315 124 ntBASIC0.1□□□□□ -2.39
HTTP42858 AC105224.1-201ENST00000587055 421 ntBASIC0.1□□□□□ -2.39
HTTP42858 AL022345.1-201ENST00000607292 135 ntBASIC0.1□□□□□ -2.39
HTTP42858 AL161423.1-201ENST00000613700 262 ntBASIC0.1□□□□□ -2.39
HTTP42858 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC0.09□□□□□ -2.39
HTTP42858 RNU6-263P-201ENST00000363811 107 ntBASIC0.09□□□□□ -2.39
HTTP42858 RNU6-348P-201ENST00000384386 107 ntBASIC0.09□□□□□ -2.39
HTTP42858 RNU6-1197P-201ENST00000391183 107 ntBASIC0.09□□□□□ -2.39
HTTP42858 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC0.09□□□□□ -2.39
HTTP42858 AL034374.1-201ENST00000406329 351 ntBASIC0.09□□□□□ -2.39
HTTP42858 Z82190.1-201ENST00000454534 490 ntBASIC0.09□□□□□ -2.39
HTTP42858 COX6CP6-201ENST00000490840 228 ntBASIC0.09□□□□□ -2.39
HTTP42858 AC025465.4-201ENST00000513422 638 ntBASIC0.09□□□□□ -2.39
HTTP42858 SNORA68.3-201ENST00000515906 83 ntBASIC0.09□□□□□ -2.39
HTTP42858 AC107954.1-201ENST00000565906 727 ntBASIC0.09□□□□□ -2.39
HTTP42858 XIAPP1-201ENST00000603162 600 ntBASIC0.09□□□□□ -2.39
HTTP42858 AC025588.2-201ENST00000604851 466 ntBASIC0.09□□□□□ -2.39
HTTP42858 AL138963.2-201ENST00000605137 226 ntBASIC0.09□□□□□ -2.39
HTTP42858 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC0.09□□□□□ -2.39
HTTP42858 MIR561-201ENST00000385216 97 ntBASIC0.09□□□□□ -2.4
HTTP42858 CCNG1P1-201ENST00000406783 885 ntBASIC0.09□□□□□ -2.4
HTTP42858 AC092634.2-201ENST00000428146 1010 ntBASIC0.09□□□□□ -2.4
HTTP42858 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC0.09□□□□□ -2.4
HTTP42858 HMGB1P36-201ENST00000487709 576 ntBASIC0.09□□□□□ -2.4
HTTP42858 COX7A2P2-201ENST00000505291 250 ntBASIC0.09□□□□□ -2.4
HTTP42858 AC074198.2-201ENST00000508153 258 ntBASIC0.09□□□□□ -2.4
HTTP42858 AC004062.1-201ENST00000509926 645 ntBASIC0.09□□□□□ -2.4
HTTP42858 RNU7-40P-201ENST00000516397 64 ntBASIC0.09□□□□□ -2.4
HTTP42858 SCARNA16.5-201ENST00000517114 183 ntBASIC0.09□□□□□ -2.4
HTTP42858 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC0.09□□□□□ -2.4
HTTP42858 AL356432.3-201ENST00000568952 465 ntBASIC0.09□□□□□ -2.4
HTTP42858 EIF1P4-201ENST00000572664 335 ntBASIC0.09□□□□□ -2.4
HTTP42858 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC0.09□□□□□ -2.4
HTTP42858 AL512506.2-201ENST00000624472 458 ntBASIC0.09□□□□□ -2.4
HTTP42858 AC015726.3-201ENST00000624501 418 ntBASIC0.09□□□□□ -2.4
HTTP42858 Y_RNA.447-201ENST00000384184 113 ntBASIC0.09□□□□□ -2.4
HTTP42858 AL589994.1-201ENST00000404962 340 ntBASIC0.09□□□□□ -2.4
HTTP42858 RPS26P5-201ENST00000418544 335 ntBASIC0.09□□□□□ -2.4
HTTP42858 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC0.09□□□□□ -2.4
HTTP42858 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC0.09□□□□□ -2.4
HTTP42858 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC0.09□□□□□ -2.4
HTTP42858 AC090142.3-201ENST00000519012 385 ntBASIC0.09□□□□□ -2.4
HTTP42858 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC0.09□□□□□ -2.4
HTTP42858 AC009509.4-201ENST00000619202 509 ntBASIC0.09□□□□□ -2.4
HTTP42858 RNU6-1155P-201ENST00000363554 107 ntBASIC0.08□□□□□ -2.4
HTTP42858 RNU6-317P-201ENST00000384031 107 ntBASIC0.08□□□□□ -2.4
HTTP42858 RPL22P18-201ENST00000417197 377 ntBASIC0.08□□□□□ -2.4
HTTP42858 SNORD57-201ENST00000448188 72 ntBASIC0.08□□□□□ -2.4
HTTP42858 AL034418.1-201ENST00000448675 860 ntBASIC0.08□□□□□ -2.4
HTTP42858 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC0.08□□□□□ -2.4
HTTP42858 AC073544.2-201ENST00000601155 540 ntBASIC0.08□□□□□ -2.4
HTTP42858 AL391834.1-201ENST00000609609 560 ntBASIC0.08□□□□□ -2.4
HTTP42858 MIR6864-201ENST00000617935 70 ntBASIC0.08□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 139.6 ms