Protein–RNA interactions for Protein: P41002

CCNF, Cyclin-F, humanhuman

Predictions only

Length 786 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNFP41002 RNU6-708P-201ENST00000384217 107 ntBASIC4.18□□□□□ -1.74
CCNFP41002 RNU6-72P-201ENST00000384285 79 ntBASIC4.18□□□□□ -1.74
CCNFP41002 Y_RNA.592-201ENST00000410274 109 ntBASIC4.18□□□□□ -1.74
CCNFP41002 RPL18P10-201ENST00000425606 538 ntBASIC4.18□□□□□ -1.74
CCNFP41002 AL157831.1-201ENST00000426134 473 ntBASIC4.18□□□□□ -1.74
CCNFP41002 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC4.18□□□□□ -1.74
CCNFP41002 AC034236.1-201ENST00000469891 373 ntBASIC4.18□□□□□ -1.74
CCNFP41002 RPL23AP49-201ENST00000492925 468 ntBASIC4.18□□□□□ -1.74
CCNFP41002 AC107222.1-201ENST00000510899 637 ntBASIC4.18□□□□□ -1.74
CCNFP41002 FTH1P9-201ENST00000513251 355 ntBASIC4.18□□□□□ -1.74
CCNFP41002 RNA5SP309-201ENST00000516670 106 ntBASIC4.18□□□□□ -1.74
CCNFP41002 RNU6-897P-201ENST00000517135 105 ntBASIC4.18□□□□□ -1.74
CCNFP41002 CASP1P1-201ENST00000526345 212 ntBASIC4.18□□□□□ -1.74
CCNFP41002 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC4.18□□□□□ -1.74
CCNFP41002 AC007458.1-201ENST00000542812 373 ntBASIC4.18□□□□□ -1.74
CCNFP41002 AC011373.1-201ENST00000607270 237 ntBASIC4.18□□□□□ -1.74
CCNFP41002 AC005046.1-201ENST00000608515 625 ntBASIC4.18□□□□□ -1.74
CCNFP41002 AC027309.3-201ENST00000623419 351 ntBASIC4.18□□□□□ -1.74
CCNFP41002 SCARNA4-202ENST00000625402 129 ntBASIC4.18□□□□□ -1.74
CCNFP41002 U4.7-201ENST00000638126 106 ntBASIC4.18□□□□□ -1.74
CCNFP41002 FAM35BP-202ENST00000497389 3337 ntBASIC4.18□□□□□ -1.74
CCNFP41002 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
CCNFP41002 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC4.18□□□□□ -1.74
CCNFP41002 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
CCNFP41002 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC4.18□□□□□ -1.74
CCNFP41002 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC4.18□□□□□ -1.74
CCNFP41002 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
CCNFP41002 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
CCNFP41002 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
CCNFP41002 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC4.17□□□□□ -1.74
CCNFP41002 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
CCNFP41002 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
CCNFP41002 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
CCNFP41002 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC4.17□□□□□ -1.74
CCNFP41002 OR56A5-201ENST00000340110 738 ntBASIC4.17□□□□□ -1.74
CCNFP41002 RNU6-770P-201ENST00000363929 105 ntBASIC4.17□□□□□ -1.74
CCNFP41002 SNORA70.2-201ENST00000364506 135 ntBASIC4.17□□□□□ -1.74
CCNFP41002 RNU6-472P-201ENST00000384299 107 ntBASIC4.17□□□□□ -1.74
CCNFP41002 RNU1-89P-201ENST00000384592 164 ntBASIC4.17□□□□□ -1.74
CCNFP41002 MT-TW-201ENST00000387382 68 ntBASIC4.17□□□□□ -1.74
CCNFP41002 U3.22-201ENST00000391120 215 ntBASIC4.17□□□□□ -1.74
CCNFP41002 TMEM167AP1-201ENST00000423409 219 ntBASIC4.17□□□□□ -1.74
CCNFP41002 AC013470.1-201ENST00000453438 462 ntBASIC4.17□□□□□ -1.74
CCNFP41002 RPS23P7-201ENST00000466210 444 ntBASIC4.17□□□□□ -1.74
CCNFP41002 UBE2CP3-201ENST00000502715 450 ntBASIC4.17□□□□□ -1.74
CCNFP41002 RNU6-408P-201ENST00000515910 100 ntBASIC4.17□□□□□ -1.74
CCNFP41002 RN7SKP272-201ENST00000516988 232 ntBASIC4.17□□□□□ -1.74
CCNFP41002 RNU6-570P-201ENST00000517051 105 ntBASIC4.17□□□□□ -1.74
CCNFP41002 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
CCNFP41002 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC4.17□□□□□ -1.74
CCNFP41002 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC4.17□□□□□ -1.74
CCNFP41002 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC4.17□□□□□ -1.74
CCNFP41002 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC4.17□□□□□ -1.74
CCNFP41002 AC078938.1-201ENST00000620993 318 ntBASIC4.17□□□□□ -1.74
CCNFP41002 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC4.17□□□□□ -1.74
CCNFP41002 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
CCNFP41002 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC4.17□□□□□ -1.74
CCNFP41002 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC4.17□□□□□ -1.74
CCNFP41002 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
CCNFP41002 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
CCNFP41002 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
CCNFP41002 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC4.16□□□□□ -1.74
CCNFP41002 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
CCNFP41002 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
CCNFP41002 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
CCNFP41002 RNU1-14P-201ENST00000362759 152 ntBASIC4.16□□□□□ -1.74
CCNFP41002 RNU6-898P-201ENST00000365627 104 ntBASIC4.16□□□□□ -1.74
CCNFP41002 Y_RNA.483-201ENST00000384380 101 ntBASIC4.16□□□□□ -1.74
CCNFP41002 BTF3L4P2-201ENST00000392798 346 ntBASIC4.16□□□□□ -1.74
CCNFP41002 AC124916.1-201ENST00000444020 547 ntBASIC4.16□□□□□ -1.74
CCNFP41002 AC079354.2-201ENST00000453523 154 ntBASIC4.16□□□□□ -1.74
CCNFP41002 RN7SKP210-201ENST00000459176 261 ntBASIC4.16□□□□□ -1.74
CCNFP41002 RPS29P27-201ENST00000463711 170 ntBASIC4.16□□□□□ -1.74
CCNFP41002 AC084357.1-201ENST00000473404 255 ntBASIC4.16□□□□□ -1.74
CCNFP41002 RPL30P10-201ENST00000488148 337 ntBASIC4.16□□□□□ -1.74
CCNFP41002 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC4.16□□□□□ -1.74
CCNFP41002 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC4.16□□□□□ -1.74
CCNFP41002 RNU2-53P-201ENST00000516257 147 ntBASIC4.16□□□□□ -1.74
CCNFP41002 RNU1-103P-201ENST00000516502 125 ntBASIC4.16□□□□□ -1.74
CCNFP41002 SNORA31.18-201ENST00000517043 134 ntBASIC4.16□□□□□ -1.74
CCNFP41002 TRAPPC2P2-201ENST00000517589 409 ntBASIC4.16□□□□□ -1.74
CCNFP41002 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
CCNFP41002 ASB8-204ENST00000536071 568 ntTSL 4 BASIC4.16□□□□□ -1.74
CCNFP41002 H3F3AP1-201ENST00000559984 334 ntBASIC4.16□□□□□ -1.74
CCNFP41002 UBE2Q2P8-201ENST00000560644 102 ntBASIC4.16□□□□□ -1.74
CCNFP41002 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC4.16□□□□□ -1.74
CCNFP41002 AC020895.1-201ENST00000595362 272 ntBASIC4.16□□□□□ -1.74
CCNFP41002 B3GNTL1P2-201ENST00000603673 288 ntBASIC4.16□□□□□ -1.74
CCNFP41002 AC008962.1-201ENST00000605729 304 ntBASIC4.16□□□□□ -1.74
CCNFP41002 AC130454.1-201ENST00000622948 401 ntBASIC4.16□□□□□ -1.74
CCNFP41002 AL773545.4-201ENST00000637262 310 ntBASIC4.16□□□□□ -1.74
CCNFP41002 AL513478.4-201ENST00000641636 310 ntBASIC4.16□□□□□ -1.74
CCNFP41002 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC4.16□□□□□ -1.74
CCNFP41002 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC4.16□□□□□ -1.74
CCNFP41002 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC4.16□□□□□ -1.74
CCNFP41002 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC4.16□□□□□ -1.74
CCNFP41002 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
CCNFP41002 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
CCNFP41002 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC4.15□□□□□ -1.74
CCNFP41002 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC4.15□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 87 ms