Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC2.91□□□□□ -1.94
HADHAP40939 RNU6-91P-201ENST00000607774 107 ntBASIC2.91□□□□□ -1.94
HADHAP40939 AC103591.3-201ENST00000608684 209 ntBASIC2.91□□□□□ -1.94
HADHAP40939 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC2.91□□□□□ -1.94
HADHAP40939 DLEU2_6.2-201ENST00000620994 136 ntBASIC2.91□□□□□ -1.94
HADHAP40939 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC2.91□□□□□ -1.94
HADHAP40939 OR5AK4P-201ENST00000635912 903 ntBASIC2.91□□□□□ -1.94
HADHAP40939 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
HADHAP40939 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.9□□□□□ -1.94
HADHAP40939 MTND4P14-201ENST00000435799 1354 ntBASIC2.9□□□□□ -1.94
HADHAP40939 RNU1-100P-201ENST00000365255 165 ntBASIC2.9□□□□□ -1.95
HADHAP40939 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC2.9□□□□□ -1.95
HADHAP40939 MTCO3P30-201ENST00000426425 670 ntBASIC2.9□□□□□ -1.95
HADHAP40939 AC107083.1-201ENST00000439643 279 ntBASIC2.9□□□□□ -1.95
HADHAP40939 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC2.9□□□□□ -1.95
HADHAP40939 MTND1P1-201ENST00000445453 368 ntBASIC2.9□□□□□ -1.95
HADHAP40939 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC2.9□□□□□ -1.95
HADHAP40939 AC027673.1-201ENST00000456245 405 ntBASIC2.9□□□□□ -1.95
HADHAP40939 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC2.9□□□□□ -1.95
HADHAP40939 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
HADHAP40939 MEPE-206ENST00000511670 550 ntTSL 4 BASIC2.9□□□□□ -1.95
HADHAP40939 SCGB1D5P-201ENST00000515134 247 ntBASIC2.9□□□□□ -1.95
HADHAP40939 SNORA9.3-201ENST00000516383 129 ntBASIC2.9□□□□□ -1.95
HADHAP40939 RN7SKP219-201ENST00000516825 296 ntBASIC2.9□□□□□ -1.95
HADHAP40939 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC2.9□□□□□ -1.95
HADHAP40939 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC2.9□□□□□ -1.95
HADHAP40939 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC2.9□□□□□ -1.95
HADHAP40939 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC2.9□□□□□ -1.95
HADHAP40939 AP001330.5-201ENST00000607176 411 ntBASIC2.9□□□□□ -1.95
HADHAP40939 AC087241.4-201ENST00000612441 480 ntBASIC2.9□□□□□ -1.95
HADHAP40939 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC2.9□□□□□ -1.95
HADHAP40939 SRP54-214ENST00000630962 162 ntTSL 5 BASIC2.9□□□□□ -1.95
HADHAP40939 MIR7157-201ENST00000635801 60 ntBASIC2.9□□□□□ -1.95
HADHAP40939 MIR7515-201ENST00000637837 67 ntBASIC2.9□□□□□ -1.95
HADHAP40939 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
HADHAP40939 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
HADHAP40939 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.9□□□□□ -1.95
HADHAP40939 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.9□□□□□ -1.95
HADHAP40939 SNORA80A-201ENST00000363922 136 ntBASIC2.89□□□□□ -1.95
HADHAP40939 RNU6-45P-201ENST00000384471 107 ntBASIC2.89□□□□□ -1.95
HADHAP40939 MIR10A-201ENST00000385043 110 ntBASIC2.89□□□□□ -1.95
HADHAP40939 RNU6-607P-201ENST00000411283 108 ntBASIC2.89□□□□□ -1.95
HADHAP40939 AL592148.1-201ENST00000413568 445 ntBASIC2.89□□□□□ -1.95
HADHAP40939 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.89□□□□□ -1.95
HADHAP40939 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC2.89□□□□□ -1.95
HADHAP40939 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC2.89□□□□□ -1.95
HADHAP40939 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC2.89□□□□□ -1.95
HADHAP40939 LAMTOR5P1-201ENST00000444290 270 ntBASIC2.89□□□□□ -1.95
HADHAP40939 HIGD1AP2-201ENST00000446367 280 ntBASIC2.89□□□□□ -1.95
HADHAP40939 SNRPFP3-201ENST00000457792 225 ntBASIC2.89□□□□□ -1.95
HADHAP40939 AC011005.2-201ENST00000487324 359 ntBASIC2.89□□□□□ -1.95
HADHAP40939 AC074344.1-201ENST00000512823 224 ntBASIC2.89□□□□□ -1.95
HADHAP40939 SCARNA17.1-201ENST00000516211 143 ntBASIC2.89□□□□□ -1.95
HADHAP40939 RNU6-581P-201ENST00000516214 105 ntBASIC2.89□□□□□ -1.95
HADHAP40939 SCARNA17.2-201ENST00000516334 143 ntBASIC2.89□□□□□ -1.95
HADHAP40939 ACA59.2-201ENST00000517061 156 ntBASIC2.89□□□□□ -1.95
HADHAP40939 AP004607.1-201ENST00000524456 203 ntBASIC2.89□□□□□ -1.95
HADHAP40939 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.89□□□□□ -1.95
HADHAP40939 AC135279.1-201ENST00000543493 504 ntBASIC2.89□□□□□ -1.95
HADHAP40939 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC2.89□□□□□ -1.95
HADHAP40939 LRRC37A5P-203ENST00000580181 585 ntBASIC2.89□□□□□ -1.95
HADHAP40939 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
HADHAP40939 AC090616.3-201ENST00000582184 217 ntBASIC2.89□□□□□ -1.95
HADHAP40939 MIR3605-201ENST00000583214 100 ntBASIC2.89□□□□□ -1.95
HADHAP40939 AL359198.2-201ENST00000611836 194 ntBASIC2.89□□□□□ -1.95
HADHAP40939 AC107871.2-201ENST00000612894 502 ntBASIC2.89□□□□□ -1.95
HADHAP40939 SCARNA17.4-201ENST00000614296 143 ntBASIC2.89□□□□□ -1.95
HADHAP40939 AC015540.1-201ENST00000615828 501 ntBASIC2.89□□□□□ -1.95
HADHAP40939 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC2.89□□□□□ -1.95
HADHAP40939 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC2.89□□□□□ -1.95
HADHAP40939 AC006386.2-201ENST00000624491 75 ntBASIC2.89□□□□□ -1.95
HADHAP40939 AC012005.1-201ENST00000624575 75 ntBASIC2.89□□□□□ -1.95
HADHAP40939 MIR6733-201ENST00000635723 61 ntBASIC2.89□□□□□ -1.95
HADHAP40939 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.89□□□□□ -1.95
HADHAP40939 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.89□□□□□ -1.95
HADHAP40939 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.89□□□□□ -1.95
HADHAP40939 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
HADHAP40939 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
HADHAP40939 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
HADHAP40939 SNORD3E-201ENST00000362899 217 ntBASIC2.88□□□□□ -1.95
HADHAP40939 RNU6-1322P-201ENST00000364309 107 ntBASIC2.88□□□□□ -1.95
HADHAP40939 RNU6-996P-201ENST00000365438 107 ntBASIC2.88□□□□□ -1.95
HADHAP40939 RNU6-72P-201ENST00000384285 79 ntBASIC2.88□□□□□ -1.95
HADHAP40939 RNU6-434P-201ENST00000384376 107 ntBASIC2.88□□□□□ -1.95
HADHAP40939 MIR181B1-201ENST00000385240 110 ntBASIC2.88□□□□□ -1.95
HADHAP40939 AL590004.2-201ENST00000404787 371 ntBASIC2.88□□□□□ -1.95
HADHAP40939 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC2.88□□□□□ -1.95
HADHAP40939 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC2.88□□□□□ -1.95
HADHAP40939 MTND3P21-201ENST00000433774 331 ntBASIC2.88□□□□□ -1.95
HADHAP40939 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC2.88□□□□□ -1.95
HADHAP40939 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC2.88□□□□□ -1.95
HADHAP40939 PSPHP1-201ENST00000450062 261 ntBASIC2.88□□□□□ -1.95
HADHAP40939 GSTA11P-201ENST00000452866 669 ntBASIC2.88□□□□□ -1.95
HADHAP40939 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC2.88□□□□□ -1.95
HADHAP40939 AC092436.1-201ENST00000506450 503 ntBASIC2.88□□□□□ -1.95
HADHAP40939 AC098799.2-201ENST00000509466 868 ntBASIC2.88□□□□□ -1.95
HADHAP40939 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC2.88□□□□□ -1.95
HADHAP40939 AC090136.1-201ENST00000520009 240 ntBASIC2.88□□□□□ -1.95
HADHAP40939 AP001893.2-201ENST00000526949 202 ntBASIC2.88□□□□□ -1.95
HADHAP40939 AP005435.4-201ENST00000529514 284 ntBASIC2.88□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 99.9 ms