Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 SDR42E1P3-201ENST00000438345 502 ntBASIC1.78□□□□□ -2.12
RFC3P40938 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC1.78□□□□□ -2.12
RFC3P40938 AC003071.1-201ENST00000451219 789 ntBASIC1.78□□□□□ -2.12
RFC3P40938 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC1.78□□□□□ -2.12
RFC3P40938 HMGN2P23-201ENST00000456759 269 ntBASIC1.78□□□□□ -2.12
RFC3P40938 MTCO1P42-201ENST00000457379 726 ntBASIC1.78□□□□□ -2.12
RFC3P40938 RNA5SP233-201ENST00000459153 113 ntBASIC1.78□□□□□ -2.12
RFC3P40938 AC107032.1-201ENST00000485945 480 ntBASIC1.78□□□□□ -2.12
RFC3P40938 RPS3AP22-201ENST00000488297 769 ntBASIC1.78□□□□□ -2.12
RFC3P40938 AC140059.1-201ENST00000489238 361 ntBASIC1.78□□□□□ -2.12
RFC3P40938 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC1.78□□□□□ -2.12
RFC3P40938 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC1.78□□□□□ -2.12
RFC3P40938 AC109927.2-201ENST00000506416 303 ntBASIC1.78□□□□□ -2.12
RFC3P40938 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC1.78□□□□□ -2.12
RFC3P40938 RNU6-914P-201ENST00000516749 109 ntBASIC1.78□□□□□ -2.12
RFC3P40938 RNU6-677P-201ENST00000516914 101 ntBASIC1.78□□□□□ -2.12
RFC3P40938 RNU6-1092P-201ENST00000516955 87 ntBASIC1.78□□□□□ -2.12
RFC3P40938 SNORA48.11-201ENST00000517015 89 ntBASIC1.78□□□□□ -2.12
RFC3P40938 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC1.78□□□□□ -2.12
RFC3P40938 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC1.78□□□□□ -2.12
RFC3P40938 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC1.78□□□□□ -2.12
RFC3P40938 AL049838.1-201ENST00000563647 981 ntBASIC1.78□□□□□ -2.12
RFC3P40938 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC1.78□□□□□ -2.12
RFC3P40938 AC144521.1-201ENST00000607148 956 ntBASIC1.78□□□□□ -2.12
RFC3P40938 AC108747.1-201ENST00000609508 535 ntBASIC1.78□□□□□ -2.12
RFC3P40938 AL139418.1-201ENST00000613613 177 ntBASIC1.78□□□□□ -2.12
RFC3P40938 AC021755.4-201ENST00000616620 456 ntBASIC1.78□□□□□ -2.12
RFC3P40938 SDR42E1P4-201ENST00000620894 481 ntBASIC1.78□□□□□ -2.12
RFC3P40938 AC010608.3-201ENST00000625048 527 ntBASIC1.78□□□□□ -2.12
RFC3P40938 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC1.78□□□□□ -2.12
RFC3P40938 ANKRD36BP1-202ENST00000604892 1417 ntBASIC1.77□□□□□ -2.13
RFC3P40938 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
RFC3P40938 Y_RNA.302-201ENST00000364997 102 ntBASIC1.77□□□□□ -2.13
RFC3P40938 RNU5E-6P-201ENST00000365574 115 ntBASIC1.77□□□□□ -2.13
RFC3P40938 EIF1AXP1-201ENST00000419267 435 ntBASIC1.77□□□□□ -2.13
RFC3P40938 AIMP1P2-201ENST00000425294 312 ntBASIC1.77□□□□□ -2.13
RFC3P40938 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC1.77□□□□□ -2.13
RFC3P40938 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC1.77□□□□□ -2.13
RFC3P40938 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC1.77□□□□□ -2.13
RFC3P40938 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC1.77□□□□□ -2.13
RFC3P40938 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC1.77□□□□□ -2.13
RFC3P40938 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC1.77□□□□□ -2.13
RFC3P40938 AL009048.1-201ENST00000450437 298 ntBASIC1.77□□□□□ -2.13
RFC3P40938 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC1.77□□□□□ -2.13
RFC3P40938 AC123904.2-201ENST00000548059 300 ntBASIC1.77□□□□□ -2.13
RFC3P40938 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC1.77□□□□□ -2.13
RFC3P40938 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
RFC3P40938 PSMA3P-201ENST00000555485 635 ntBASIC1.77□□□□□ -2.13
RFC3P40938 AL157871.3-201ENST00000557231 293 ntBASIC1.77□□□□□ -2.13
RFC3P40938 MIR1273C-201ENST00000578669 77 ntBASIC1.77□□□□□ -2.13
RFC3P40938 BNIP3P40-201ENST00000596017 556 ntBASIC1.77□□□□□ -2.13
RFC3P40938 AP000860.1-201ENST00000605250 559 ntBASIC1.77□□□□□ -2.13
RFC3P40938 AC107952.2-201ENST00000606048 486 ntBASIC1.77□□□□□ -2.13
RFC3P40938 AC092953.2-201ENST00000608000 699 ntBASIC1.77□□□□□ -2.13
RFC3P40938 AL353997.5-201ENST00000618886 171 ntBASIC1.77□□□□□ -2.13
RFC3P40938 USP12-203ENST00000620323 349 ntTSL 3 BASIC1.77□□□□□ -2.13
RFC3P40938 ATM-228ENST00000639240 498 ntTSL 5 BASIC1.77□□□□□ -2.13
RFC3P40938 ATM-230ENST00000640388 578 ntTSL 5 BASIC1.77□□□□□ -2.13
RFC3P40938 AC002543.1-201ENST00000299783 1954 ntBASIC1.77□□□□□ -2.13
RFC3P40938 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC1.77□□□□□ -2.13
RFC3P40938 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.76□□□□□ -2.13
RFC3P40938 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.76□□□□□ -2.13
RFC3P40938 RNU6-960P-201ENST00000364056 120 ntBASIC1.76□□□□□ -2.13
RFC3P40938 MIR561-201ENST00000385216 97 ntBASIC1.76□□□□□ -2.13
RFC3P40938 HMGN2P39-201ENST00000398005 273 ntBASIC1.76□□□□□ -2.13
RFC3P40938 RPS20P2-201ENST00000402520 389 ntBASIC1.76□□□□□ -2.13
RFC3P40938 AL133475.1-201ENST00000404414 305 ntBASIC1.76□□□□□ -2.13
RFC3P40938 RNU6-1025P-201ENST00000410629 104 ntBASIC1.76□□□□□ -2.13
RFC3P40938 AL451074.3-201ENST00000437709 472 ntBASIC1.76□□□□□ -2.13
RFC3P40938 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC1.76□□□□□ -2.13
RFC3P40938 AL139824.2-201ENST00000458731 1095 ntBASIC1.76□□□□□ -2.13
RFC3P40938 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
RFC3P40938 HMGB3P17-201ENST00000504195 649 ntBASIC1.76□□□□□ -2.13
RFC3P40938 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC1.76□□□□□ -2.13
RFC3P40938 AC117522.2-201ENST00000510049 657 ntBASIC1.76□□□□□ -2.13
RFC3P40938 MTATP6P9-201ENST00000515039 680 ntBASIC1.76□□□□□ -2.13
RFC3P40938 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC1.76□□□□□ -2.13
RFC3P40938 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC1.76□□□□□ -2.13
RFC3P40938 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
RFC3P40938 MTND4P33-201ENST00000556706 766 ntBASIC1.76□□□□□ -2.13
RFC3P40938 AC233702.2-202ENST00000562547 291 ntBASIC1.76□□□□□ -2.13
RFC3P40938 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC1.76□□□□□ -2.13
RFC3P40938 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC1.76□□□□□ -2.13
RFC3P40938 AC009314.1-201ENST00000603871 304 ntBASIC1.76□□□□□ -2.13
RFC3P40938 AC087045.1-201ENST00000605856 382 ntBASIC1.76□□□□□ -2.13
RFC3P40938 AC009974.1-201ENST00000608881 455 ntBASIC1.76□□□□□ -2.13
RFC3P40938 AC017037.3-201ENST00000625016 472 ntBASIC1.76□□□□□ -2.13
RFC3P40938 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC1.76□□□□□ -2.13
RFC3P40938 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.76□□□□□ -2.13
RFC3P40938 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
RFC3P40938 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.75□□□□□ -2.13
RFC3P40938 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
RFC3P40938 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.75□□□□□ -2.13
RFC3P40938 RNU6-1159P-201ENST00000362933 107 ntBASIC1.75□□□□□ -2.13
RFC3P40938 FTH1P15-201ENST00000406984 280 ntBASIC1.75□□□□□ -2.13
RFC3P40938 RNU6-1140P-201ENST00000410517 106 ntBASIC1.75□□□□□ -2.13
RFC3P40938 AC006366.1-201ENST00000422002 759 ntBASIC1.75□□□□□ -2.13
RFC3P40938 AL022400.1-201ENST00000423946 935 ntBASIC1.75□□□□□ -2.13
RFC3P40938 MTCO2P23-201ENST00000425216 680 ntBASIC1.75□□□□□ -2.13
RFC3P40938 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC1.75□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 116.9 ms