Protein–RNA interactions for Protein: P35527

KRT9, Keratin, type I cytoskeletal 9, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT9P35527 AC005609.4-201ENST00000625071 447 ntBASIC3.13□□□□□ -1.91
KRT9P35527 ZNF680P1-201ENST00000436625 1469 ntBASIC3.13□□□□□ -1.91
KRT9P35527 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
KRT9P35527 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
KRT9P35527 AC000403.1-201ENST00000613696 3585 ntBASIC3.12□□□□□ -1.91
KRT9P35527 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC3.12□□□□□ -1.91
KRT9P35527 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC3.12□□□□□ -1.91
KRT9P35527 Y_RNA.248-201ENST00000364501 109 ntBASIC3.12□□□□□ -1.91
KRT9P35527 SNORD14B-201ENST00000364533 90 ntBASIC3.12□□□□□ -1.91
KRT9P35527 RNU6-1280P-201ENST00000365211 107 ntBASIC3.12□□□□□ -1.91
KRT9P35527 RNU6-1283P-201ENST00000365314 105 ntBASIC3.12□□□□□ -1.91
KRT9P35527 SET-203ENST00000372688 801 ntTSL 2 BASIC3.12□□□□□ -1.91
KRT9P35527 RNU6-1083P-201ENST00000384022 107 ntBASIC3.12□□□□□ -1.91
KRT9P35527 MIR627-201ENST00000384979 97 ntBASIC3.12□□□□□ -1.91
KRT9P35527 FO393413.1-201ENST00000402892 195 ntBASIC3.12□□□□□ -1.91
KRT9P35527 AL592148.1-201ENST00000413568 445 ntBASIC3.12□□□□□ -1.91
KRT9P35527 RPL21P90-201ENST00000415692 466 ntBASIC3.12□□□□□ -1.91
KRT9P35527 RPL7P10-201ENST00000417407 739 ntBASIC3.12□□□□□ -1.91
KRT9P35527 AL627311.1-201ENST00000431514 115 ntBASIC3.12□□□□□ -1.91
KRT9P35527 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC3.12□□□□□ -1.91
KRT9P35527 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC3.12□□□□□ -1.91
KRT9P35527 NDUFB1P2-201ENST00000449477 176 ntBASIC3.12□□□□□ -1.91
KRT9P35527 TEX41-209ENST00000451478 452 ntTSL 2 BASIC3.12□□□□□ -1.91
KRT9P35527 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC3.12□□□□□ -1.91
KRT9P35527 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC3.12□□□□□ -1.91
KRT9P35527 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC3.12□□□□□ -1.91
KRT9P35527 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC3.12□□□□□ -1.91
KRT9P35527 AC116655.1-201ENST00000508324 901 ntBASIC3.12□□□□□ -1.91
KRT9P35527 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC3.12□□□□□ -1.91
KRT9P35527 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3.12□□□□□ -1.91
KRT9P35527 MIR4703-201ENST00000577728 79 ntBASIC3.12□□□□□ -1.91
KRT9P35527 MIR5692A1-201ENST00000580523 69 ntBASIC3.12□□□□□ -1.91
KRT9P35527 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC3.12□□□□□ -1.91
KRT9P35527 AC023043.3-201ENST00000593113 385 ntBASIC3.12□□□□□ -1.91
KRT9P35527 AC008945.2-201ENST00000606056 604 ntBASIC3.12□□□□□ -1.91
KRT9P35527 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC3.12□□□□□ -1.91
KRT9P35527 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC3.12□□□□□ -1.91
KRT9P35527 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
KRT9P35527 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
KRT9P35527 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
KRT9P35527 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
KRT9P35527 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
KRT9P35527 RNU6-1180P-201ENST00000364935 107 ntBASIC3.11□□□□□ -1.91
KRT9P35527 RNU1-100P-201ENST00000365255 165 ntBASIC3.11□□□□□ -1.91
KRT9P35527 SNORA9.2-201ENST00000365361 133 ntBASIC3.11□□□□□ -1.91
KRT9P35527 RNU6-259P-201ENST00000383999 107 ntBASIC3.11□□□□□ -1.91
KRT9P35527 NDUFB4P4-201ENST00000404822 243 ntBASIC3.11□□□□□ -1.91
KRT9P35527 AC016831.2-201ENST00000417179 352 ntBASIC3.11□□□□□ -1.91
KRT9P35527 MTCO2P19-201ENST00000427513 598 ntBASIC3.11□□□□□ -1.91
KRT9P35527 AC002486.1-201ENST00000435098 391 ntBASIC3.11□□□□□ -1.91
KRT9P35527 MTND1P18-201ENST00000448191 573 ntBASIC3.11□□□□□ -1.91
KRT9P35527 AC103975.1-201ENST00000482506 483 ntBASIC3.11□□□□□ -1.91
KRT9P35527 AKIRIN2P1-201ENST00000505898 352 ntBASIC3.11□□□□□ -1.91
KRT9P35527 MTND2P33-201ENST00000506452 1031 ntBASIC3.11□□□□□ -1.91
KRT9P35527 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC3.11□□□□□ -1.91
KRT9P35527 RN7SKP57-201ENST00000517248 293 ntBASIC3.11□□□□□ -1.91
KRT9P35527 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC3.11□□□□□ -1.91
KRT9P35527 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC3.11□□□□□ -1.91
KRT9P35527 COX6CP5-201ENST00000527162 228 ntBASIC3.11□□□□□ -1.91
KRT9P35527 FAM92A1P1-201ENST00000528023 890 ntBASIC3.11□□□□□ -1.91
KRT9P35527 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC3.11□□□□□ -1.91
KRT9P35527 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC3.11□□□□□ -1.91
KRT9P35527 AC092325.1-201ENST00000566449 554 ntBASIC3.11□□□□□ -1.91
KRT9P35527 AC025678.1-201ENST00000567861 338 ntBASIC3.11□□□□□ -1.91
KRT9P35527 MIR548S-201ENST00000581352 82 ntBASIC3.11□□□□□ -1.91
KRT9P35527 AC090616.3-201ENST00000582184 217 ntBASIC3.11□□□□□ -1.91
KRT9P35527 AC087045.1-201ENST00000605856 382 ntBASIC3.11□□□□□ -1.91
KRT9P35527 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC3.11□□□□□ -1.91
KRT9P35527 ATP5A1P2-202ENST00000616464 443 ntBASIC3.11□□□□□ -1.91
KRT9P35527 uc_338.11-201ENST00000619132 160 ntBASIC3.11□□□□□ -1.91
KRT9P35527 USP12-203ENST00000620323 349 ntTSL 3 BASIC3.11□□□□□ -1.91
KRT9P35527 ATM-228ENST00000639240 498 ntTSL 5 BASIC3.11□□□□□ -1.91
KRT9P35527 ATM-230ENST00000640388 578 ntTSL 5 BASIC3.11□□□□□ -1.91
KRT9P35527 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
KRT9P35527 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
KRT9P35527 Y_RNA.1-201ENST00000352915 104 ntBASIC3.1□□□□□ -1.91
KRT9P35527 RNU6-461P-201ENST00000364195 107 ntBASIC3.1□□□□□ -1.91
KRT9P35527 SNORD56.5-201ENST00000364281 72 ntBASIC3.1□□□□□ -1.91
KRT9P35527 MIR10A-201ENST00000385043 110 ntBASIC3.1□□□□□ -1.91
KRT9P35527 MIR147B-201ENST00000390185 80 ntBASIC3.1□□□□□ -1.91
KRT9P35527 BTF3P7-201ENST00000407097 488 ntBASIC3.1□□□□□ -1.91
KRT9P35527 MIR548F1-201ENST00000408667 84 ntBASIC3.1□□□□□ -1.91
KRT9P35527 RNU4-46P-201ENST00000410818 138 ntBASIC3.1□□□□□ -1.91
KRT9P35527 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC3.1□□□□□ -1.91
KRT9P35527 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC3.1□□□□□ -1.91
KRT9P35527 RBMX2P4-201ENST00000441256 376 ntBASIC3.1□□□□□ -1.91
KRT9P35527 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC3.1□□□□□ -1.91
KRT9P35527 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC3.1□□□□□ -1.91
KRT9P35527 AC116353.2-201ENST00000505332 712 ntBASIC3.1□□□□□ -1.91
KRT9P35527 AC092436.1-201ENST00000506450 503 ntBASIC3.1□□□□□ -1.91
KRT9P35527 SCGB1D5P-201ENST00000515134 247 ntBASIC3.1□□□□□ -1.91
KRT9P35527 ACA59.2-201ENST00000517061 156 ntBASIC3.1□□□□□ -1.91
KRT9P35527 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC3.1□□□□□ -1.91
KRT9P35527 ZNF519P2-201ENST00000557032 169 ntBASIC3.1□□□□□ -1.91
KRT9P35527 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC3.1□□□□□ -1.91
KRT9P35527 AF250324.2-201ENST00000608299 610 ntBASIC3.1□□□□□ -1.91
KRT9P35527 AL162274.2-201ENST00000614406 332 ntBASIC3.1□□□□□ -1.91
KRT9P35527 U4.5-201ENST00000617137 123 ntBASIC3.1□□□□□ -1.91
KRT9P35527 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC3.1□□□□□ -1.91
KRT9P35527 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 148.2 ms