Protein–RNA interactions for Protein: P23763

VAMP1, Vesicle-associated membrane protein 1, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1P23763 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC3.98□□□□□ -1.77
VAMP1P23763 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC3.98□□□□□ -1.77
VAMP1P23763 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
VAMP1P23763 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
VAMP1P23763 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
VAMP1P23763 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
VAMP1P23763 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC3.98□□□□□ -1.77
VAMP1P23763 RN7SKP275-201ENST00000364626 301 ntBASIC3.98□□□□□ -1.77
VAMP1P23763 SNORD21-201ENST00000383953 95 ntBASIC3.98□□□□□ -1.77
VAMP1P23763 RNU6-823P-201ENST00000391042 103 ntBASIC3.98□□□□□ -1.77
VAMP1P23763 TBCAP2-201ENST00000416175 326 ntBASIC3.98□□□□□ -1.77
VAMP1P23763 AC108075.1-201ENST00000424692 529 ntBASIC3.98□□□□□ -1.77
VAMP1P23763 C4BPAP2-201ENST00000428434 478 ntBASIC3.98□□□□□ -1.77
VAMP1P23763 AL445584.1-201ENST00000431451 330 ntBASIC3.98□□□□□ -1.77
VAMP1P23763 HMGB1P37-201ENST00000439613 609 ntBASIC3.98□□□□□ -1.77
VAMP1P23763 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC3.98□□□□□ -1.77
VAMP1P23763 AL162591.2-201ENST00000449634 317 ntBASIC3.98□□□□□ -1.77
VAMP1P23763 CHEK2P4-201ENST00000450340 246 ntBASIC3.98□□□□□ -1.77
VAMP1P23763 AP000870.1-201ENST00000472927 406 ntBASIC3.98□□□□□ -1.77
VAMP1P23763 AL121594.1-201ENST00000475906 575 ntBASIC3.98□□□□□ -1.77
VAMP1P23763 AC093852.1-201ENST00000503587 266 ntBASIC3.98□□□□□ -1.77
VAMP1P23763 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC3.98□□□□□ -1.77
VAMP1P23763 AC008958.1-201ENST00000511047 682 ntBASIC3.98□□□□□ -1.77
VAMP1P23763 RNA5SP54-201ENST00000516951 92 ntBASIC3.98□□□□□ -1.77
VAMP1P23763 AP006289.1-201ENST00000538089 277 ntBASIC3.98□□□□□ -1.77
VAMP1P23763 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC3.98□□□□□ -1.77
VAMP1P23763 MIR5695-201ENST00000579717 85 ntBASIC3.98□□□□□ -1.77
VAMP1P23763 TEX41-243ENST00000614173 190 ntTSL 5 BASIC3.98□□□□□ -1.77
VAMP1P23763 AL096712.1-201ENST00000614561 159 ntBASIC3.98□□□□□ -1.77
VAMP1P23763 AC005296.1-201ENST00000616145 209 ntBASIC3.98□□□□□ -1.77
VAMP1P23763 FTO-223ENST00000640179 210 ntTSL 5 BASIC3.98□□□□□ -1.77
VAMP1P23763 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
VAMP1P23763 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC3.98□□□□□ -1.77
VAMP1P23763 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
VAMP1P23763 AC026241.1-201ENST00000517873 2142 ntBASIC3.98□□□□□ -1.77
VAMP1P23763 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
VAMP1P23763 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC3.98□□□□□ -1.77
VAMP1P23763 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC3.97□□□□□ -1.77
VAMP1P23763 snoU2_19.1-201ENST00000362361 80 ntBASIC3.97□□□□□ -1.77
VAMP1P23763 Y_RNA.40-201ENST00000362645 93 ntBASIC3.97□□□□□ -1.77
VAMP1P23763 Y_RNA.380-201ENST00000365663 111 ntBASIC3.97□□□□□ -1.77
VAMP1P23763 Y_RNA.557-201ENST00000384680 107 ntBASIC3.97□□□□□ -1.77
VAMP1P23763 Y_RNA.645-201ENST00000391229 102 ntBASIC3.97□□□□□ -1.77
VAMP1P23763 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC3.97□□□□□ -1.77
VAMP1P23763 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC3.97□□□□□ -1.77
VAMP1P23763 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC3.97□□□□□ -1.77
VAMP1P23763 CKS1BP2-201ENST00000497342 240 ntBASIC3.97□□□□□ -1.77
VAMP1P23763 AC074250.1-201ENST00000511117 192 ntBASIC3.97□□□□□ -1.77
VAMP1P23763 RNU6-1114P-201ENST00000516022 107 ntBASIC3.97□□□□□ -1.77
VAMP1P23763 AC126177.5-201ENST00000549599 178 ntBASIC3.97□□□□□ -1.77
VAMP1P23763 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC3.97□□□□□ -1.77
VAMP1P23763 RPL30P11-203ENST00000598995 310 ntBASIC3.97□□□□□ -1.77
VAMP1P23763 FO393422.1-201ENST00000603908 708 ntBASIC3.97□□□□□ -1.77
VAMP1P23763 MIR4727-201ENST00000622232 55 ntBASIC3.97□□□□□ -1.77
VAMP1P23763 AC138305.3-201ENST00000624988 240 ntBASIC3.97□□□□□ -1.77
VAMP1P23763 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
VAMP1P23763 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.97□□□□□ -1.77
VAMP1P23763 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
VAMP1P23763 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC3.97□□□□□ -1.77
VAMP1P23763 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC3.96□□□□□ -1.77
VAMP1P23763 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC3.96□□□□□ -1.78
VAMP1P23763 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.78
VAMP1P23763 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.96□□□□□ -1.78
VAMP1P23763 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
VAMP1P23763 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
VAMP1P23763 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.96□□□□□ -1.78
VAMP1P23763 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
VAMP1P23763 RNU6-1309P-201ENST00000363305 108 ntBASIC3.96□□□□□ -1.78
VAMP1P23763 RNU6-280P-201ENST00000364145 104 ntBASIC3.96□□□□□ -1.78
VAMP1P23763 SNORA63.7-201ENST00000365579 123 ntBASIC3.96□□□□□ -1.78
VAMP1P23763 MIR218-1-201ENST00000384999 110 ntBASIC3.96□□□□□ -1.78
VAMP1P23763 RPL21P75-201ENST00000396599 483 ntBASIC3.96□□□□□ -1.78
VAMP1P23763 RPL21P28-201ENST00000401418 483 ntBASIC3.96□□□□□ -1.78
VAMP1P23763 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC3.96□□□□□ -1.78
VAMP1P23763 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC3.96□□□□□ -1.78
VAMP1P23763 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.96□□□□□ -1.78
VAMP1P23763 H2AFZP6-201ENST00000444403 394 ntBASIC3.96□□□□□ -1.78
VAMP1P23763 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC3.96□□□□□ -1.78
VAMP1P23763 RPL21P11-201ENST00000461458 483 ntBASIC3.96□□□□□ -1.78
VAMP1P23763 RPL21P39-201ENST00000463605 483 ntBASIC3.96□□□□□ -1.78
VAMP1P23763 RPS23P7-201ENST00000466210 444 ntBASIC3.96□□□□□ -1.78
VAMP1P23763 AC009127.1-201ENST00000467090 155 ntBASIC3.96□□□□□ -1.78
VAMP1P23763 RPS26P28-201ENST00000470806 348 ntBASIC3.96□□□□□ -1.78
VAMP1P23763 AC087190.1-201ENST00000484462 480 ntBASIC3.96□□□□□ -1.78
VAMP1P23763 AC107032.1-201ENST00000485945 480 ntBASIC3.96□□□□□ -1.78
VAMP1P23763 AC132942.1-201ENST00000486753 483 ntBASIC3.96□□□□□ -1.78
VAMP1P23763 AC093591.1-201ENST00000491435 481 ntBASIC3.96□□□□□ -1.78
VAMP1P23763 RPL21P16-201ENST00000495531 483 ntBASIC3.96□□□□□ -1.78
VAMP1P23763 AC100770.1-201ENST00000532310 322 ntBASIC3.96□□□□□ -1.78
VAMP1P23763 AC027544.3-201ENST00000535082 757 ntBASIC3.96□□□□□ -1.78
VAMP1P23763 AC008269.2-201ENST00000561915 1105 ntBASIC3.96□□□□□ -1.78
VAMP1P23763 AC015912.2-201ENST00000571053 181 ntBASIC3.96□□□□□ -1.78
VAMP1P23763 AC113195.1-201ENST00000579952 141 ntBASIC3.96□□□□□ -1.78
VAMP1P23763 MIR3199-1-201ENST00000582434 88 ntBASIC3.96□□□□□ -1.78
VAMP1P23763 AL078605.1-201ENST00000603529 500 ntBASIC3.96□□□□□ -1.78
VAMP1P23763 AL499605.1-201ENST00000604628 403 ntBASIC3.96□□□□□ -1.78
VAMP1P23763 Z98200.1-201ENST00000607298 470 ntBASIC3.96□□□□□ -1.78
VAMP1P23763 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
VAMP1P23763 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
VAMP1P23763 MAPK10-322ENST00000641485 4530 ntBASIC3.96□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 105 ms