Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 MTCYBP8-201ENST00000422855 651 ntBASIC2.72□□□□□ -1.97
CDH3P22223 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC2.72□□□□□ -1.97
CDH3P22223 CALM2P2-201ENST00000428512 440 ntBASIC2.72□□□□□ -1.97
CDH3P22223 MYL8P-204ENST00000431574 518 ntBASIC2.72□□□□□ -1.97
CDH3P22223 MTND1P4-201ENST00000435196 415 ntBASIC2.72□□□□□ -1.97
CDH3P22223 RPL7P54-201ENST00000438336 674 ntBASIC2.72□□□□□ -1.97
CDH3P22223 AC016691.1-201ENST00000441321 413 ntBASIC2.72□□□□□ -1.97
CDH3P22223 AC104058.1-201ENST00000448028 297 ntBASIC2.72□□□□□ -1.97
CDH3P22223 MTND1P18-201ENST00000448191 573 ntBASIC2.72□□□□□ -1.97
CDH3P22223 AC073415.1-201ENST00000449240 153 ntBASIC2.72□□□□□ -1.97
CDH3P22223 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC2.72□□□□□ -1.97
CDH3P22223 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC2.72□□□□□ -1.97
CDH3P22223 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.72□□□□□ -1.97
CDH3P22223 GMFBP1-201ENST00000467831 427 ntBASIC2.72□□□□□ -1.97
CDH3P22223 AC083798.1-201ENST00000472671 131 ntBASIC2.72□□□□□ -1.97
CDH3P22223 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC2.72□□□□□ -1.97
CDH3P22223 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC2.72□□□□□ -1.97
CDH3P22223 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC2.72□□□□□ -1.97
CDH3P22223 MTCO3P9-201ENST00000506989 781 ntBASIC2.72□□□□□ -1.97
CDH3P22223 TBCAP3-201ENST00000512475 312 ntBASIC2.72□□□□□ -1.97
CDH3P22223 AC105417.1-201ENST00000514691 285 ntBASIC2.72□□□□□ -1.97
CDH3P22223 RNU6-703P-201ENST00000516946 107 ntBASIC2.72□□□□□ -1.97
CDH3P22223 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC2.72□□□□□ -1.97
CDH3P22223 HMGB1P33-201ENST00000563485 527 ntBASIC2.72□□□□□ -1.97
CDH3P22223 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC2.72□□□□□ -1.97
CDH3P22223 CYCSP39-201ENST00000565821 309 ntBASIC2.72□□□□□ -1.97
CDH3P22223 AC090616.3-201ENST00000582184 217 ntBASIC2.72□□□□□ -1.97
CDH3P22223 OR1M4P-201ENST00000589199 287 ntBASIC2.72□□□□□ -1.97
CDH3P22223 BNIP3P30-201ENST00000601184 574 ntBASIC2.72□□□□□ -1.97
CDH3P22223 AC007621.1-201ENST00000604544 437 ntBASIC2.72□□□□□ -1.97
CDH3P22223 MTND4LP5-201ENST00000605152 292 ntBASIC2.72□□□□□ -1.97
CDH3P22223 AC024940.5-201ENST00000622889 474 ntBASIC2.72□□□□□ -1.97
CDH3P22223 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC2.72□□□□□ -1.97
CDH3P22223 FO624990.1-201ENST00000636373 85 ntBASIC2.72□□□□□ -1.97
CDH3P22223 AC068137.3-201ENST00000639191 341 ntBASIC2.72□□□□□ -1.97
CDH3P22223 AC073869.6-201ENST00000640656 341 ntBASIC2.72□□□□□ -1.97
CDH3P22223 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
CDH3P22223 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.72□□□□□ -1.97
CDH3P22223 ANKRD36BP1-201ENST00000358576 1779 ntBASIC2.72□□□□□ -1.97
CDH3P22223 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.97
CDH3P22223 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC2.71□□□□□ -1.97
CDH3P22223 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.71□□□□□ -1.97
CDH3P22223 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
CDH3P22223 Y_RNA.6-201ENST00000362350 114 ntBASIC2.71□□□□□ -1.98
CDH3P22223 RNU1-35P-201ENST00000362782 153 ntBASIC2.71□□□□□ -1.98
CDH3P22223 RNU6-552P-201ENST00000362869 119 ntBASIC2.71□□□□□ -1.98
CDH3P22223 RNU6-1322P-201ENST00000364309 107 ntBASIC2.71□□□□□ -1.98
CDH3P22223 RNU6-116P-201ENST00000384042 109 ntBASIC2.71□□□□□ -1.98
CDH3P22223 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
CDH3P22223 RNU6-903P-201ENST00000391270 109 ntBASIC2.71□□□□□ -1.98
CDH3P22223 AL139039.1-201ENST00000401900 692 ntBASIC2.71□□□□□ -1.98
CDH3P22223 RNA5SP111-201ENST00000411386 101 ntBASIC2.71□□□□□ -1.98
CDH3P22223 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC2.71□□□□□ -1.98
CDH3P22223 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC2.71□□□□□ -1.98
CDH3P22223 ZNF885P-201ENST00000420174 1098 ntBASIC2.71□□□□□ -1.98
CDH3P22223 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC2.71□□□□□ -1.98
CDH3P22223 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC2.71□□□□□ -1.98
CDH3P22223 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
CDH3P22223 AC000111.3-201ENST00000433478 193 ntBASIC2.71□□□□□ -1.98
CDH3P22223 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC2.71□□□□□ -1.98
CDH3P22223 AC022493.1-201ENST00000492984 337 ntBASIC2.71□□□□□ -1.98
CDH3P22223 EIF4EP3-201ENST00000498782 656 ntBASIC2.71□□□□□ -1.98
CDH3P22223 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC2.71□□□□□ -1.98
CDH3P22223 AC113155.1-201ENST00000511141 769 ntBASIC2.71□□□□□ -1.98
CDH3P22223 HPRT1P3-201ENST00000539521 576 ntBASIC2.71□□□□□ -1.98
CDH3P22223 AL512360.1-201ENST00000555346 234 ntBASIC2.71□□□□□ -1.98
CDH3P22223 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC2.71□□□□□ -1.98
CDH3P22223 AC009163.5-201ENST00000575421 637 ntBASIC2.71□□□□□ -1.98
CDH3P22223 MIR1273C-201ENST00000578669 77 ntBASIC2.71□□□□□ -1.98
CDH3P22223 HMGN2P15-201ENST00000585707 270 ntBASIC2.71□□□□□ -1.98
CDH3P22223 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC2.71□□□□□ -1.98
CDH3P22223 AC008945.2-201ENST00000606056 604 ntBASIC2.71□□□□□ -1.98
CDH3P22223 AC093788.1-201ENST00000609356 927 ntBASIC2.71□□□□□ -1.98
CDH3P22223 AL354950.2-201ENST00000617939 290 ntBASIC2.71□□□□□ -1.98
CDH3P22223 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
CDH3P22223 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.71□□□□□ -1.98
CDH3P22223 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
CDH3P22223 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC2.71□□□□□ -1.98
CDH3P22223 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.71□□□□□ -1.98
CDH3P22223 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC2.7□□□□□ -1.98
CDH3P22223 AL354685.2-201ENST00000448218 1447 ntBASIC2.7□□□□□ -1.98
CDH3P22223 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.7□□□□□ -1.98
CDH3P22223 RNA5SP393-201ENST00000363423 117 ntBASIC2.7□□□□□ -1.98
CDH3P22223 RNU6-461P-201ENST00000364195 107 ntBASIC2.7□□□□□ -1.98
CDH3P22223 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC2.7□□□□□ -1.98
CDH3P22223 RNU1-73P-201ENST00000383971 164 ntBASIC2.7□□□□□ -1.98
CDH3P22223 RNU6-517P-201ENST00000384362 110 ntBASIC2.7□□□□□ -1.98
CDH3P22223 MIR548F1-201ENST00000408667 84 ntBASIC2.7□□□□□ -1.98
CDH3P22223 RNU6-1025P-201ENST00000410629 104 ntBASIC2.7□□□□□ -1.98
CDH3P22223 AL592148.1-201ENST00000413568 445 ntBASIC2.7□□□□□ -1.98
CDH3P22223 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC2.7□□□□□ -1.98
CDH3P22223 AC098614.2-201ENST00000426040 255 ntBASIC2.7□□□□□ -1.98
CDH3P22223 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC2.7□□□□□ -1.98
CDH3P22223 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.7□□□□□ -1.98
CDH3P22223 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.7□□□□□ -1.98
CDH3P22223 AC009296.1-201ENST00000443146 155 ntBASIC2.7□□□□□ -1.98
CDH3P22223 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC2.7□□□□□ -1.98
CDH3P22223 AL360271.2-201ENST00000447710 161 ntBASIC2.7□□□□□ -1.98
CDH3P22223 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC2.7□□□□□ -1.98
CDH3P22223 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC2.7□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 109.9 ms