| BCL3 | P20749 | SIRT1-202 | ENST00000403579 | 3333 nt | TSL 1 (best) BASIC | 2.4 | □□□□□ -2.03 | | |
| BCL3 | P20749 | AC099654.7-201 | ENST00000635788 | 2127 nt | BASIC | 2.39 | □□□□□ -2.03 | | |
| BCL3 | P20749 | ZNF280D-201 | ENST00000267807 | 4328 nt | APPRIS P3 TSL 1 (best) BASIC | 2.39 | □□□□□ -2.03 | | |
| BCL3 | P20749 | CCDC82-202 | ENST00000423339 | 1878 nt | APPRIS P2 TSL 1 (best) BASIC | 2.39 | □□□□□ -2.03 | | |
| BCL3 | P20749 | AC096644.4-201 | ENST00000563417 | 2912 nt | BASIC | 2.39 | □□□□□ -2.03 | | |
| BCL3 | P20749 | EBAG9-210 | ENST00000620557 | 2186 nt | APPRIS P1 TSL 3 BASIC | 2.39 | □□□□□ -2.03 | | |
| BCL3 | P20749 | CHD9-202 | ENST00000398510 | 11337 nt | TSL 1 (best) BASIC | 2.39 | □□□□□ -2.03 | | |
| BCL3 | P20749 | UBE2L2-201 | ENST00000254302 | 429 nt | BASIC | 2.39 | □□□□□ -2.03 | | |
| BCL3 | P20749 | OR5AK2-201 | ENST00000326855 | 996 nt | APPRIS P1 BASIC | 2.39 | □□□□□ -2.03 | | |
| BCL3 | P20749 | Y_RNA.72-201 | ENST00000362894 | 103 nt | BASIC | 2.39 | □□□□□ -2.03 | | |
| BCL3 | P20749 | Y_RNA.160-201 | ENST00000363677 | 92 nt | BASIC | 2.39 | □□□□□ -2.03 | | |
| BCL3 | P20749 | RNU6-884P-201 | ENST00000363889 | 107 nt | BASIC | 2.39 | □□□□□ -2.03 | | |
| BCL3 | P20749 | Y_RNA.231-201 | ENST00000364358 | 102 nt | BASIC | 2.39 | □□□□□ -2.03 | | |
| BCL3 | P20749 | Y_RNA.245-201 | ENST00000364493 | 95 nt | BASIC | 2.39 | □□□□□ -2.03 | | |
| BCL3 | P20749 | RNU4-66P-201 | ENST00000365199 | 138 nt | BASIC | 2.39 | □□□□□ -2.03 | | |
| BCL3 | P20749 | RNU6-116P-201 | ENST00000384042 | 109 nt | BASIC | 2.39 | □□□□□ -2.03 | | |
| BCL3 | P20749 | RNU6-851P-201 | ENST00000384565 | 107 nt | BASIC | 2.39 | □□□□□ -2.03 | | |
| BCL3 | P20749 | MIR514A2-201 | ENST00000385131 | 88 nt | BASIC | 2.39 | □□□□□ -2.03 | | |
| BCL3 | P20749 | MIR514A3-201 | ENST00000385132 | 88 nt | BASIC | 2.39 | □□□□□ -2.03 | | |
| BCL3 | P20749 | TRAV26-1-201 | ENST00000390455 | 537 nt | APPRIS P1 BASIC | 2.39 | □□□□□ -2.03 | | |
| BCL3 | P20749 | MDM2-210 | ENST00000393413 | 657 nt | TSL 1 (best) BASIC | 2.39 | □□□□□ -2.03 | | |
| BCL3 | P20749 | CISD1P1-201 | ENST00000393907 | 327 nt | BASIC | 2.39 | □□□□□ -2.03 | | |
| BCL3 | P20749 | RPL21P75-201 | ENST00000396599 | 483 nt | BASIC | 2.39 | □□□□□ -2.03 | | |
| BCL3 | P20749 | MIR888-201 | ENST00000401186 | 77 nt | BASIC | 2.39 | □□□□□ -2.03 | | |
| BCL3 | P20749 | RPL21P28-201 | ENST00000401418 | 483 nt | BASIC | 2.39 | □□□□□ -2.03 | | |
| BCL3 | P20749 | AL592114.1-201 | ENST00000403842 | 483 nt | BASIC | 2.39 | □□□□□ -2.03 | | |
| BCL3 | P20749 | SNORD88.1-201 | ENST00000408684 | 91 nt | BASIC | 2.39 | □□□□□ -2.03 | | |
| BCL3 | P20749 | RNA5SP111-201 | ENST00000411386 | 101 nt | BASIC | 2.39 | □□□□□ -2.03 | | |
| BCL3 | P20749 | AL117337.1-201 | ENST00000412789 | 444 nt | TSL 3 BASIC | 2.39 | □□□□□ -2.03 | | |
| BCL3 | P20749 | AP000473.1-201 | ENST00000413645 | 550 nt | TSL 3 BASIC | 2.39 | □□□□□ -2.03 | | |
| BCL3 | P20749 | AC092809.3-201 | ENST00000415453 | 231 nt | BASIC | 2.39 | □□□□□ -2.03 | | |
| BCL3 | P20749 | RPL21P111-201 | ENST00000418453 | 477 nt | BASIC | 2.39 | □□□□□ -2.03 | | |
| BCL3 | P20749 | AL500522.1-201 | ENST00000423667 | 318 nt | TSL 3 BASIC | 2.39 | □□□□□ -2.03 | | |
| BCL3 | P20749 | AL513185.2-201 | ENST00000425543 | 193 nt | BASIC | 2.39 | □□□□□ -2.03 | | |
| BCL3 | P20749 | AC007566.1-201 | ENST00000427458 | 643 nt | TSL 5 BASIC | 2.39 | □□□□□ -2.03 | | |
| BCL3 | P20749 | AL451060.1-203 | ENST00000431307 | 362 nt | TSL 3 BASIC | 2.39 | □□□□□ -2.03 | | |
| BCL3 | P20749 | ERLEC1P1-201 | ENST00000433806 | 578 nt | BASIC | 2.39 | □□□□□ -2.03 | | |
| BCL3 | P20749 | SNRPEP9-201 | ENST00000436794 | 238 nt | BASIC | 2.39 | □□□□□ -2.03 | | |
| BCL3 | P20749 | AL121601.2-201 | ENST00000438019 | 707 nt | BASIC | 2.39 | □□□□□ -2.03 | | |
| BCL3 | P20749 | LINC00393-201 | ENST00000443621 | 282 nt | TSL 3 BASIC | 2.39 | □□□□□ -2.03 | | |
| BCL3 | P20749 | AC104058.1-201 | ENST00000448028 | 297 nt | BASIC | 2.39 | □□□□□ -2.03 | | |
| BCL3 | P20749 | MTND5P20-201 | ENST00000448677 | 143 nt | BASIC | 2.39 | □□□□□ -2.03 | | |
| BCL3 | P20749 | CECR9-201 | ENST00000453421 | 199 nt | BASIC | 2.39 | □□□□□ -2.03 | | |
| BCL3 | P20749 | RPL21P39-201 | ENST00000463605 | 483 nt | BASIC | 2.39 | □□□□□ -2.03 | | |
| BCL3 | P20749 | RPL21P93-201 | ENST00000480465 | 489 nt | BASIC | 2.39 | □□□□□ -2.03 | | |
| BCL3 | P20749 | AC087190.1-201 | ENST00000484462 | 480 nt | BASIC | 2.39 | □□□□□ -2.03 | | |
| BCL3 | P20749 | AC093591.1-201 | ENST00000491435 | 481 nt | BASIC | 2.39 | □□□□□ -2.03 | | |
| BCL3 | P20749 | RPL21P16-201 | ENST00000495531 | 483 nt | BASIC | 2.39 | □□□□□ -2.03 | | |
| BCL3 | P20749 | AC083906.5-201 | ENST00000503722 | 328 nt | BASIC | 2.39 | □□□□□ -2.03 | | |
| BCL3 | P20749 | AC012055.2-201 | ENST00000504167 | 335 nt | TSL 3 BASIC | 2.39 | □□□□□ -2.03 | | |
| BCL3 | P20749 | AC009901.1-201 | ENST00000506703 | 541 nt | BASIC | 2.39 | □□□□□ -2.03 | | |
| BCL3 | P20749 | AC114786.4-201 | ENST00000508771 | 728 nt | BASIC | 2.39 | □□□□□ -2.03 | | |
| BCL3 | P20749 | SAR1B-211 | ENST00000509937 | 455 nt | TSL 5 BASIC | 2.39 | □□□□□ -2.03 | | |
| BCL3 | P20749 | AC105999.1-201 | ENST00000518722 | 473 nt | TSL 3 BASIC | 2.39 | □□□□□ -2.03 | | |
| BCL3 | P20749 | AC021242.2-203 | ENST00000521842 | 687 nt | TSL 3 BASIC | 2.39 | □□□□□ -2.03 | | |
| BCL3 | P20749 | CENPUP1-201 | ENST00000526649 | 1202 nt | BASIC | 2.39 | □□□□□ -2.03 | | |
| BCL3 | P20749 | MDM2-233 | ENST00000545204 | 398 nt | TSL 5 BASIC | 2.39 | □□□□□ -2.03 | | |
| BCL3 | P20749 | MIR3944-201 | ENST00000581277 | 108 nt | BASIC | 2.39 | □□□□□ -2.03 | | |
| BCL3 | P20749 | LINC01897-203 | ENST00000591503 | 369 nt | TSL 2 BASIC | 2.39 | □□□□□ -2.03 | | |
| BCL3 | P20749 | BNIP3P9-201 | ENST00000603714 | 553 nt | BASIC | 2.39 | □□□□□ -2.03 | | |
| BCL3 | P20749 | AC004805.2-201 | ENST00000605382 | 482 nt | BASIC | 2.39 | □□□□□ -2.03 | | |
| BCL3 | P20749 | AC005046.1-201 | ENST00000608515 | 625 nt | BASIC | 2.39 | □□□□□ -2.03 | | |
| BCL3 | P20749 | AC107871.2-201 | ENST00000612894 | 502 nt | BASIC | 2.39 | □□□□□ -2.03 | | |
| BCL3 | P20749 | AL162274.2-201 | ENST00000614406 | 332 nt | BASIC | 2.39 | □□□□□ -2.03 | | |
| BCL3 | P20749 | uc_338.34-201 | ENST00000617467 | 174 nt | BASIC | 2.39 | □□□□□ -2.03 | | |
| BCL3 | P20749 | AC092794.2-201 | ENST00000620933 | 563 nt | BASIC | 2.39 | □□□□□ -2.03 | | |
| BCL3 | P20749 | MIR8057-201 | ENST00000620957 | 69 nt | BASIC | 2.39 | □□□□□ -2.03 | | |
| BCL3 | P20749 | PTP4A2-220 | ENST00000627328 | 615 nt | TSL 5 BASIC | 2.39 | □□□□□ -2.03 | | |
| BCL3 | P20749 | U2.21-201 | ENST00000637295 | 81 nt | BASIC | 2.39 | □□□□□ -2.03 | | |
| BCL3 | P20749 | AP003122.5-201 | ENST00000527668 | 3766 nt | BASIC | 2.39 | □□□□□ -2.03 | | |
| BCL3 | P20749 | FPGT-TNNI3K-202 | ENST00000370895 | 7566 nt | TSL 2 BASIC | 2.39 | □□□□□ -2.03 | | |
| BCL3 | P20749 | IL23R-205 | ENST00000637002 | 2208 nt | TSL 1 (best) BASIC | 2.38 | □□□□□ -2.03 | | |
| BCL3 | P20749 | SYTL2-230 | ENST00000634661 | 6672 nt | TSL 5 BASIC | 2.38 | □□□□□ -2.03 | | |
| BCL3 | P20749 | RNU5E-4P-201 | ENST00000364931 | 120 nt | BASIC | 2.38 | □□□□□ -2.03 | | |
| BCL3 | P20749 | S100A12-201 | ENST00000368737 | 518 nt | APPRIS P1 TSL 1 (best) BASIC | 2.38 | □□□□□ -2.03 | | |
| BCL3 | P20749 | OR51A4-201 | ENST00000380373 | 1002 nt | APPRIS P1 BASIC | 2.38 | □□□□□ -2.03 | | |
| BCL3 | P20749 | RNU6-38P-201 | ENST00000384085 | 107 nt | BASIC | 2.38 | □□□□□ -2.03 | | |
| BCL3 | P20749 | Y_RNA.534-201 | ENST00000384599 | 112 nt | BASIC | 2.38 | □□□□□ -2.03 | | |
| BCL3 | P20749 | UBE2V1P2-201 | ENST00000397758 | 440 nt | BASIC | 2.38 | □□□□□ -2.03 | | |
| BCL3 | P20749 | AL590004.2-201 | ENST00000404787 | 371 nt | BASIC | 2.38 | □□□□□ -2.03 | | |
| BCL3 | P20749 | PPP3R1-202 | ENST00000409377 | 684 nt | TSL 3 BASIC | 2.38 | □□□□□ -2.03 | | |
| BCL3 | P20749 | AC092755.1-201 | ENST00000441746 | 97 nt | TSL 3 BASIC | 2.38 | □□□□□ -2.03 | | |
| BCL3 | P20749 | AC073342.1-202 | ENST00000446192 | 457 nt | TSL 5 BASIC | 2.38 | □□□□□ -2.03 | | |
| BCL3 | P20749 | FABP5P15-201 | ENST00000453566 | 214 nt | BASIC | 2.38 | □□□□□ -2.03 | | |
| BCL3 | P20749 | AC092798.1-201 | ENST00000458542 | 409 nt | BASIC | 2.38 | □□□□□ -2.03 | | |
| BCL3 | P20749 | RNU6-333P-201 | ENST00000459117 | 107 nt | BASIC | 2.38 | □□□□□ -2.03 | | |
| BCL3 | P20749 | MIR1302-2HG-201 | ENST00000469289 | 535 nt | TSL 5 BASIC | 2.38 | □□□□□ -2.03 | | |
| BCL3 | P20749 | RPL21P99-201 | ENST00000480369 | 423 nt | BASIC | 2.38 | □□□□□ -2.03 | | |
| BCL3 | P20749 | MGC32805-203 | ENST00000506053 | 652 nt | TSL 3 BASIC | 2.38 | □□□□□ -2.03 | | |
| BCL3 | P20749 | AC091826.1-201 | ENST00000514065 | 313 nt | BASIC | 2.38 | □□□□□ -2.03 | | |
| BCL3 | P20749 | LRRC34P2-201 | ENST00000514850 | 553 nt | BASIC | 2.38 | □□□□□ -2.03 | | |
| BCL3 | P20749 | AC004054.1-201 | ENST00000515111 | 270 nt | TSL 3 BASIC | 2.38 | □□□□□ -2.03 | | |
| BCL3 | P20749 | SNORA9.3-201 | ENST00000516383 | 129 nt | BASIC | 2.38 | □□□□□ -2.03 | | |
| BCL3 | P20749 | RNU6-914P-201 | ENST00000516749 | 109 nt | BASIC | 2.38 | □□□□□ -2.03 | | |
| BCL3 | P20749 | Y_RNA.702-201 | ENST00000516843 | 96 nt | BASIC | 2.38 | □□□□□ -2.03 | | |
| BCL3 | P20749 | RNU6-143P-201 | ENST00000516942 | 93 nt | BASIC | 2.38 | □□□□□ -2.03 | | |
| BCL3 | P20749 | AC078814.3-201 | ENST00000553036 | 491 nt | BASIC | 2.38 | □□□□□ -2.03 | | |
| BCL3 | P20749 | AC015813.2-201 | ENST00000578794 | 711 nt | APPRIS P1 TSL 3 BASIC | 2.38 | □□□□□ -2.03 | | |
| BCL3 | P20749 | ZNF861P-201 | ENST00000588126 | 639 nt | BASIC | 2.38 | □□□□□ -2.03 | | |
| BCL3 | P20749 | AC012468.1-201 | ENST00000604888 | 430 nt | BASIC | 2.38 | □□□□□ -2.03 | | |