Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 AL158827.2-201ENST00000602494 330 ntBASIC3.91□□□□□ -1.78
COL6A2P12110 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC3.91□□□□□ -1.78
COL6A2P12110 AC114781.5-201ENST00000615297 108 ntBASIC3.91□□□□□ -1.78
COL6A2P12110 AL691447.3-201ENST00000635020 330 ntBASIC3.91□□□□□ -1.78
COL6A2P12110 MIR6830-201ENST00000636015 70 ntBASIC3.91□□□□□ -1.78
COL6A2P12110 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.91□□□□□ -1.78
COL6A2P12110 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
COL6A2P12110 ZNF299P-201ENST00000406845 1804 ntBASIC3.91□□□□□ -1.78
COL6A2P12110 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC3.91□□□□□ -1.78
COL6A2P12110 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC3.9□□□□□ -1.78
COL6A2P12110 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.9□□□□□ -1.78
COL6A2P12110 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
COL6A2P12110 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
COL6A2P12110 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
COL6A2P12110 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.9□□□□□ -1.78
COL6A2P12110 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
COL6A2P12110 AC007256.1-201ENST00000392253 2765 ntBASIC3.9□□□□□ -1.78
COL6A2P12110 RNU6-600P-201ENST00000362524 99 ntBASIC3.9□□□□□ -1.79
COL6A2P12110 Y_RNA.152-201ENST00000363578 100 ntBASIC3.9□□□□□ -1.79
COL6A2P12110 RNU6-595P-201ENST00000363944 107 ntBASIC3.9□□□□□ -1.79
COL6A2P12110 RNA5SP399-201ENST00000364003 117 ntBASIC3.9□□□□□ -1.79
COL6A2P12110 SNORD14.1-201ENST00000365609 90 ntBASIC3.9□□□□□ -1.79
COL6A2P12110 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
COL6A2P12110 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
COL6A2P12110 RPS29P13-201ENST00000402041 169 ntBASIC3.9□□□□□ -1.79
COL6A2P12110 U3.42-201ENST00000408746 214 ntBASIC3.9□□□□□ -1.79
COL6A2P12110 MIR1252-201ENST00000408861 65 ntBASIC3.9□□□□□ -1.79
COL6A2P12110 AL159169.1-201ENST00000421119 127 ntBASIC3.9□□□□□ -1.79
COL6A2P12110 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC3.9□□□□□ -1.79
COL6A2P12110 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC3.9□□□□□ -1.79
COL6A2P12110 CHEK2P4-201ENST00000450340 246 ntBASIC3.9□□□□□ -1.79
COL6A2P12110 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC3.9□□□□□ -1.79
COL6A2P12110 AC010655.3-201ENST00000478818 450 ntBASIC3.9□□□□□ -1.79
COL6A2P12110 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC3.9□□□□□ -1.79
COL6A2P12110 RNA5SP468-201ENST00000516782 93 ntBASIC3.9□□□□□ -1.79
COL6A2P12110 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC3.9□□□□□ -1.79
COL6A2P12110 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
COL6A2P12110 AC005476.1-201ENST00000554427 397 ntBASIC3.9□□□□□ -1.79
COL6A2P12110 AC103996.1-201ENST00000555468 102 ntBASIC3.9□□□□□ -1.79
COL6A2P12110 AC110588.1-201ENST00000559699 137 ntBASIC3.9□□□□□ -1.79
COL6A2P12110 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.9□□□□□ -1.79
COL6A2P12110 AC023575.1-201ENST00000580510 358 ntBASIC3.9□□□□□ -1.79
COL6A2P12110 AC244505.7-201ENST00000599675 272 ntBASIC3.9□□□□□ -1.79
COL6A2P12110 SRGNP1-201ENST00000603392 451 ntBASIC3.9□□□□□ -1.79
COL6A2P12110 AC006023.2-201ENST00000609916 167 ntBASIC3.9□□□□□ -1.79
COL6A2P12110 MIR6868-201ENST00000611215 58 ntBASIC3.9□□□□□ -1.79
COL6A2P12110 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.9□□□□□ -1.79
COL6A2P12110 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
COL6A2P12110 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.9□□□□□ -1.79
COL6A2P12110 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
COL6A2P12110 AP001148.1-201ENST00000624124 2359 ntBASIC3.9□□□□□ -1.79
COL6A2P12110 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.9□□□□□ -1.79
COL6A2P12110 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
COL6A2P12110 MTND5P27-201ENST00000428871 1720 ntBASIC3.9□□□□□ -1.79
COL6A2P12110 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.89□□□□□ -1.79
COL6A2P12110 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.89□□□□□ -1.79
COL6A2P12110 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.89□□□□□ -1.79
COL6A2P12110 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
COL6A2P12110 RNU1-18P-201ENST00000363062 164 ntBASIC3.89□□□□□ -1.79
COL6A2P12110 Y_RNA.106-201ENST00000363189 100 ntBASIC3.89□□□□□ -1.79
COL6A2P12110 RNU6-140P-201ENST00000384566 108 ntBASIC3.89□□□□□ -1.79
COL6A2P12110 Y_RNA.533-201ENST00000384596 114 ntBASIC3.89□□□□□ -1.79
COL6A2P12110 MIR521-1-201ENST00000384902 87 ntBASIC3.89□□□□□ -1.79
COL6A2P12110 MIR23A-201ENST00000385245 73 ntBASIC3.89□□□□□ -1.79
COL6A2P12110 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
COL6A2P12110 PPIAP31-201ENST00000405422 495 ntBASIC3.89□□□□□ -1.79
COL6A2P12110 RNU2-71P-201ENST00000411395 189 ntBASIC3.89□□□□□ -1.79
COL6A2P12110 NDUFB4P6-201ENST00000436819 366 ntBASIC3.89□□□□□ -1.79
COL6A2P12110 RPS4XP13-201ENST00000483219 789 ntBASIC3.89□□□□□ -1.79
COL6A2P12110 MTND4LP22-201ENST00000508209 276 ntBASIC3.89□□□□□ -1.79
COL6A2P12110 AC009812.2-201ENST00000517657 457 ntBASIC3.89□□□□□ -1.79
COL6A2P12110 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC3.89□□□□□ -1.79
COL6A2P12110 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC3.89□□□□□ -1.79
COL6A2P12110 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC3.89□□□□□ -1.79
COL6A2P12110 AC090877.1-201ENST00000561418 344 ntBASIC3.89□□□□□ -1.79
COL6A2P12110 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC3.89□□□□□ -1.79
COL6A2P12110 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC3.89□□□□□ -1.79
COL6A2P12110 MIR3690-201ENST00000580266 75 ntBASIC3.89□□□□□ -1.79
COL6A2P12110 MIR5188-201ENST00000583467 113 ntBASIC3.89□□□□□ -1.79
COL6A2P12110 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC3.89□□□□□ -1.79
COL6A2P12110 IPO5P1-202ENST00000600039 287 ntBASIC3.89□□□□□ -1.79
COL6A2P12110 AC124312.5-201ENST00000604451 268 ntBASIC3.89□□□□□ -1.79
COL6A2P12110 ARF4P1-201ENST00000605447 541 ntBASIC3.89□□□□□ -1.79
COL6A2P12110 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC3.89□□□□□ -1.79
COL6A2P12110 U6.98-201ENST00000637157 84 ntBASIC3.89□□□□□ -1.79
COL6A2P12110 U4.7-201ENST00000638126 106 ntBASIC3.89□□□□□ -1.79
COL6A2P12110 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
COL6A2P12110 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
COL6A2P12110 AC022336.2-201ENST00000568966 2538 ntBASIC3.89□□□□□ -1.79
COL6A2P12110 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC3.89□□□□□ -1.79
COL6A2P12110 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC3.89□□□□□ -1.79
COL6A2P12110 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.89□□□□□ -1.79
COL6A2P12110 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.88□□□□□ -1.79
COL6A2P12110 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC3.88□□□□□ -1.79
COL6A2P12110 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
COL6A2P12110 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.88□□□□□ -1.79
COL6A2P12110 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.88□□□□□ -1.79
COL6A2P12110 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.88□□□□□ -1.79
COL6A2P12110 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.88□□□□□ -1.79
COL6A2P12110 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC3.88□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 103.8 ms