Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 AC091544.4-201ENST00000555268 342 ntBASIC1.62□□□□□ -2.15
TPM1P09493 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC1.62□□□□□ -2.15
TPM1P09493 AC093788.1-201ENST00000609356 927 ntBASIC1.62□□□□□ -2.15
TPM1P09493 AL132822.1-201ENST00000617063 513 ntBASIC1.62□□□□□ -2.15
TPM1P09493 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC1.62□□□□□ -2.15
TPM1P09493 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC1.62□□□□□ -2.15
TPM1P09493 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC1.61□□□□□ -2.15
TPM1P09493 RNU1-58P-201ENST00000362413 163 ntBASIC1.61□□□□□ -2.15
TPM1P09493 RNU6-1164P-201ENST00000364428 107 ntBASIC1.61□□□□□ -2.15
TPM1P09493 RNU6-546P-201ENST00000383991 107 ntBASIC1.61□□□□□ -2.15
TPM1P09493 RNU6-701P-201ENST00000384059 107 ntBASIC1.61□□□□□ -2.15
TPM1P09493 MIR186-201ENST00000384988 86 ntBASIC1.61□□□□□ -2.15
TPM1P09493 MIR504-201ENST00000385065 83 ntBASIC1.61□□□□□ -2.15
TPM1P09493 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC1.61□□□□□ -2.15
TPM1P09493 SNORA40C-201ENST00000391285 128 ntBASIC1.61□□□□□ -2.15
TPM1P09493 MIR320C1-201ENST00000408566 88 ntBASIC1.61□□□□□ -2.15
TPM1P09493 AL513185.2-201ENST00000425543 193 ntBASIC1.61□□□□□ -2.15
TPM1P09493 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC1.61□□□□□ -2.15
TPM1P09493 MTND4P25-201ENST00000441039 533 ntBASIC1.61□□□□□ -2.15
TPM1P09493 NEFMP1-201ENST00000443423 1006 ntBASIC1.61□□□□□ -2.15
TPM1P09493 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC1.61□□□□□ -2.15
TPM1P09493 RPS3AP22-201ENST00000488297 769 ntBASIC1.61□□□□□ -2.15
TPM1P09493 AC114801.2-201ENST00000503825 781 ntBASIC1.61□□□□□ -2.15
TPM1P09493 AC135279.1-201ENST00000543493 504 ntBASIC1.61□□□□□ -2.15
TPM1P09493 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC1.61□□□□□ -2.15
TPM1P09493 AL160236.1-201ENST00000556317 195 ntBASIC1.61□□□□□ -2.15
TPM1P09493 SNORD53B-201ENST00000577887 78 ntBASIC1.61□□□□□ -2.15
TPM1P09493 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC1.61□□□□□ -2.15
TPM1P09493 AP001981.2-201ENST00000603241 418 ntBASIC1.61□□□□□ -2.15
TPM1P09493 CYP2C61P-201ENST00000604072 290 ntBASIC1.61□□□□□ -2.15
TPM1P09493 AC010900.2-201ENST00000604508 210 ntBASIC1.61□□□□□ -2.15
TPM1P09493 AC116312.1-201ENST00000606841 314 ntBASIC1.61□□□□□ -2.15
TPM1P09493 AC024060.1-201ENST00000607052 494 ntBASIC1.61□□□□□ -2.15
TPM1P09493 AC092574.1-201ENST00000609771 420 ntBASIC1.61□□□□□ -2.15
TPM1P09493 MIR6852-201ENST00000621699 66 ntBASIC1.61□□□□□ -2.15
TPM1P09493 ZNF680P1-201ENST00000436625 1469 ntBASIC1.61□□□□□ -2.15
TPM1P09493 Y_RNA.311-201ENST00000365068 96 ntBASIC1.6□□□□□ -2.15
TPM1P09493 RNU6-1274P-201ENST00000384557 107 ntBASIC1.6□□□□□ -2.15
TPM1P09493 MIR301A-201ENST00000385261 86 ntBASIC1.6□□□□□ -2.15
TPM1P09493 SRIP3-201ENST00000413200 219 ntBASIC1.6□□□□□ -2.15
TPM1P09493 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC1.6□□□□□ -2.15
TPM1P09493 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC1.6□□□□□ -2.15
TPM1P09493 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC1.6□□□□□ -2.15
TPM1P09493 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC1.6□□□□□ -2.15
TPM1P09493 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC1.6□□□□□ -2.15
TPM1P09493 TPT1P8-201ENST00000510120 555 ntBASIC1.6□□□□□ -2.15
TPM1P09493 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC1.6□□□□□ -2.15
TPM1P09493 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
TPM1P09493 LRRC6P1-201ENST00000532188 885 ntBASIC1.6□□□□□ -2.15
TPM1P09493 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC1.6□□□□□ -2.15
TPM1P09493 MTND3P13-201ENST00000574391 343 ntBASIC1.6□□□□□ -2.15
TPM1P09493 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC1.6□□□□□ -2.15
TPM1P09493 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC1.6□□□□□ -2.15
TPM1P09493 AL512643.1-201ENST00000635735 524 ntBASIC1.6□□□□□ -2.15
TPM1P09493 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
TPM1P09493 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.59□□□□□ -2.15
TPM1P09493 RBBP8P1-201ENST00000449447 1844 ntBASIC1.59□□□□□ -2.15
TPM1P09493 RNU6-560P-201ENST00000364007 108 ntBASIC1.59□□□□□ -2.15
TPM1P09493 U8.13-201ENST00000390842 128 ntBASIC1.59□□□□□ -2.15
TPM1P09493 RNU6-278P-201ENST00000390945 109 ntBASIC1.59□□□□□ -2.15
TPM1P09493 RPS12P24-201ENST00000412619 387 ntBASIC1.59□□□□□ -2.15
TPM1P09493 AC083875.1-201ENST00000419509 405 ntBASIC1.59□□□□□ -2.15
TPM1P09493 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.59□□□□□ -2.15
TPM1P09493 AC104058.1-201ENST00000448028 297 ntBASIC1.59□□□□□ -2.15
TPM1P09493 MTND1P16-201ENST00000465177 898 ntBASIC1.59□□□□□ -2.15
TPM1P09493 UBE2DNL-203ENST00000474922 222 ntBASIC1.59□□□□□ -2.15
TPM1P09493 MED28P2-201ENST00000475771 317 ntBASIC1.59□□□□□ -2.15
TPM1P09493 MTCYBP35-201ENST00000503630 1137 ntBASIC1.59□□□□□ -2.15
TPM1P09493 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC1.59□□□□□ -2.15
TPM1P09493 MTND1P36-201ENST00000522384 936 ntBASIC1.59□□□□□ -2.15
TPM1P09493 DEFB108A-201ENST00000530110 222 ntBASIC1.59□□□□□ -2.15
TPM1P09493 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC1.59□□□□□ -2.15
TPM1P09493 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC1.59□□□□□ -2.15
TPM1P09493 AL022345.1-201ENST00000607292 135 ntBASIC1.59□□□□□ -2.15
TPM1P09493 MIR6845-201ENST00000613182 61 ntBASIC1.59□□□□□ -2.15
TPM1P09493 uc_338.15-201ENST00000615470 191 ntBASIC1.59□□□□□ -2.15
TPM1P09493 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC1.59□□□□□ -2.15
TPM1P09493 SNORA63.3-201ENST00000362682 132 ntBASIC1.58□□□□□ -2.16
TPM1P09493 SNORA70B-201ENST00000384210 135 ntBASIC1.58□□□□□ -2.16
TPM1P09493 RNU6-166P-201ENST00000384371 107 ntBASIC1.58□□□□□ -2.16
TPM1P09493 SNORA67.6-201ENST00000391093 99 ntBASIC1.58□□□□□ -2.16
TPM1P09493 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
TPM1P09493 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
TPM1P09493 RN7SKP266-201ENST00000410232 287 ntBASIC1.58□□□□□ -2.16
TPM1P09493 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.58□□□□□ -2.16
TPM1P09493 RAC1P6-201ENST00000423911 575 ntBASIC1.58□□□□□ -2.16
TPM1P09493 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC1.58□□□□□ -2.16
TPM1P09493 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC1.58□□□□□ -2.16
TPM1P09493 HMGB1P18-201ENST00000438801 619 ntBASIC1.58□□□□□ -2.16
TPM1P09493 AC118469.1-201ENST00000442943 488 ntBASIC1.58□□□□□ -2.16
TPM1P09493 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC1.58□□□□□ -2.16
TPM1P09493 RNU6-953P-201ENST00000459154 107 ntBASIC1.58□□□□□ -2.16
TPM1P09493 UBL5P3-201ENST00000475112 231 ntBASIC1.58□□□□□ -2.16
TPM1P09493 TRBV12-1-201ENST00000479785 344 ntBASIC1.58□□□□□ -2.16
TPM1P09493 SNORA31.24-201ENST00000517232 57 ntBASIC1.58□□□□□ -2.16
TPM1P09493 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC1.58□□□□□ -2.16
TPM1P09493 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC1.58□□□□□ -2.16
TPM1P09493 AC022616.8-201ENST00000533569 253 ntBASIC1.58□□□□□ -2.16
TPM1P09493 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.58□□□□□ -2.16
TPM1P09493 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC1.58□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 154.8 ms