Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 USP9YP35-201ENST00000435696 412 ntBASIC0.88□□□□□ -2.27
CXCL1P09341 RPL23AP76-201ENST00000441860 458 ntBASIC0.88□□□□□ -2.27
CXCL1P09341 AC104058.1-201ENST00000448028 297 ntBASIC0.88□□□□□ -2.27
CXCL1P09341 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC0.88□□□□□ -2.27
CXCL1P09341 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC0.88□□□□□ -2.27
CXCL1P09341 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC0.88□□□□□ -2.27
CXCL1P09341 SNORD13-201ENST00000459299 104 ntBASIC0.88□□□□□ -2.27
CXCL1P09341 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC0.88□□□□□ -2.27
CXCL1P09341 AC104563.1-201ENST00000476147 376 ntBASIC0.88□□□□□ -2.27
CXCL1P09341 RPL30P7-201ENST00000479312 323 ntBASIC0.88□□□□□ -2.27
CXCL1P09341 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC0.88□□□□□ -2.27
CXCL1P09341 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC0.88□□□□□ -2.27
CXCL1P09341 UTP23-205ENST00000520733 369 ntTSL 3 BASIC0.88□□□□□ -2.27
CXCL1P09341 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC0.88□□□□□ -2.27
CXCL1P09341 AP003392.2-201ENST00000527269 208 ntBASIC0.88□□□□□ -2.27
CXCL1P09341 AC018630.3-201ENST00000542637 96 ntBASIC0.88□□□□□ -2.27
CXCL1P09341 RAB11AP2-201ENST00000545905 639 ntBASIC0.88□□□□□ -2.27
CXCL1P09341 AF131215.7-201ENST00000602443 707 ntBASIC0.88□□□□□ -2.27
CXCL1P09341 AC073413.2-201ENST00000604332 360 ntBASIC0.88□□□□□ -2.27
CXCL1P09341 AC103810.9-201ENST00000606688 112 ntBASIC0.88□□□□□ -2.27
CXCL1P09341 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC0.88□□□□□ -2.27
CXCL1P09341 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC0.88□□□□□ -2.27
CXCL1P09341 FARSBP1-201ENST00000435808 1778 ntBASIC0.88□□□□□ -2.27
CXCL1P09341 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC0.87□□□□□ -2.27
CXCL1P09341 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC0.87□□□□□ -2.27
CXCL1P09341 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC0.87□□□□□ -2.27
CXCL1P09341 Y_RNA.99-201ENST00000363138 105 ntBASIC0.87□□□□□ -2.27
CXCL1P09341 RNU6-529P-201ENST00000363383 104 ntBASIC0.87□□□□□ -2.27
CXCL1P09341 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC0.87□□□□□ -2.27
CXCL1P09341 RNU6-1122P-201ENST00000384449 107 ntBASIC0.87□□□□□ -2.27
CXCL1P09341 RNU6-1274P-201ENST00000384557 107 ntBASIC0.87□□□□□ -2.27
CXCL1P09341 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC0.87□□□□□ -2.27
CXCL1P09341 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC0.87□□□□□ -2.27
CXCL1P09341 NCOR1P3-201ENST00000420479 303 ntBASIC0.87□□□□□ -2.27
CXCL1P09341 USP9YP18-201ENST00000425912 695 ntBASIC0.87□□□□□ -2.27
CXCL1P09341 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC0.87□□□□□ -2.27
CXCL1P09341 TOMM22P2-201ENST00000430735 237 ntBASIC0.87□□□□□ -2.27
CXCL1P09341 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC0.87□□□□□ -2.27
CXCL1P09341 AL158053.1-201ENST00000441503 453 ntBASIC0.87□□□□□ -2.27
CXCL1P09341 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC0.87□□□□□ -2.27
CXCL1P09341 RPS26P55-201ENST00000471178 356 ntBASIC0.87□□□□□ -2.27
CXCL1P09341 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC0.87□□□□□ -2.27
CXCL1P09341 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC0.87□□□□□ -2.27
CXCL1P09341 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC0.87□□□□□ -2.27
CXCL1P09341 RNU2-53P-201ENST00000516257 147 ntBASIC0.87□□□□□ -2.27
CXCL1P09341 RNVU1-2-201ENST00000516326 135 ntBASIC0.87□□□□□ -2.27
CXCL1P09341 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC0.87□□□□□ -2.27
CXCL1P09341 ZKSCAN7P1-201ENST00000543668 673 ntBASIC0.87□□□□□ -2.27
CXCL1P09341 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC0.87□□□□□ -2.27
CXCL1P09341 AC012414.6-201ENST00000568241 401 ntBASIC0.87□□□□□ -2.27
CXCL1P09341 SNORA77B-201ENST00000578179 125 ntBASIC0.87□□□□□ -2.27
CXCL1P09341 AC126365.2-201ENST00000580630 379 ntBASIC0.87□□□□□ -2.27
CXCL1P09341 DPPA3P3-201ENST00000603842 430 ntBASIC0.87□□□□□ -2.27
CXCL1P09341 AL121890.5-201ENST00000620848 304 ntBASIC0.87□□□□□ -2.27
CXCL1P09341 AC097460.3-201ENST00000623099 442 ntBASIC0.87□□□□□ -2.27
CXCL1P09341 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC0.86□□□□□ -2.27
CXCL1P09341 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC0.86□□□□□ -2.27
CXCL1P09341 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC0.86□□□□□ -2.27
CXCL1P09341 MIR302D-201ENST00000362275 68 ntBASIC0.86□□□□□ -2.27
CXCL1P09341 RNU6-1187P-201ENST00000364771 110 ntBASIC0.86□□□□□ -2.27
CXCL1P09341 SNORA70.7-201ENST00000384159 133 ntBASIC0.86□□□□□ -2.27
CXCL1P09341 MIR186-201ENST00000384988 86 ntBASIC0.86□□□□□ -2.27
CXCL1P09341 AL359634.1-202ENST00000404721 284 ntBASIC0.86□□□□□ -2.27
CXCL1P09341 RPL21P24-201ENST00000413752 448 ntBASIC0.86□□□□□ -2.27
CXCL1P09341 AC139712.2-201ENST00000424302 339 ntBASIC0.86□□□□□ -2.27
CXCL1P09341 MTCO3P5-201ENST00000433620 714 ntBASIC0.86□□□□□ -2.27
CXCL1P09341 HMGB3P12-201ENST00000438745 556 ntBASIC0.86□□□□□ -2.27
CXCL1P09341 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC0.86□□□□□ -2.27
CXCL1P09341 AL035666.1-201ENST00000446195 348 ntBASIC0.86□□□□□ -2.27
CXCL1P09341 AC079776.3-201ENST00000450665 370 ntBASIC0.86□□□□□ -2.27
CXCL1P09341 RPL18AP17-201ENST00000455326 198 ntBASIC0.86□□□□□ -2.27
CXCL1P09341 AC087477.1-201ENST00000465747 340 ntBASIC0.86□□□□□ -2.27
CXCL1P09341 OR2A41P-201ENST00000473586 105 ntBASIC0.86□□□□□ -2.27
CXCL1P09341 AC026414.1-201ENST00000504046 698 ntBASIC0.86□□□□□ -2.27
CXCL1P09341 AC116337.1-201ENST00000509680 687 ntBASIC0.86□□□□□ -2.27
CXCL1P09341 SNORA31.17-201ENST00000516953 127 ntBASIC0.86□□□□□ -2.27
CXCL1P09341 RN7SKP256-201ENST00000517201 314 ntBASIC0.86□□□□□ -2.27
CXCL1P09341 AP003122.4-201ENST00000530980 758 ntBASIC0.86□□□□□ -2.27
CXCL1P09341 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC0.86□□□□□ -2.27
CXCL1P09341 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC0.86□□□□□ -2.27
CXCL1P09341 TRAV32-201ENST00000553993 340 ntBASIC0.86□□□□□ -2.27
CXCL1P09341 RPL21P5-201ENST00000554662 472 ntBASIC0.86□□□□□ -2.27
CXCL1P09341 LINC00557-201ENST00000563184 1279 ntBASIC0.86□□□□□ -2.27
CXCL1P09341 SUB1P4-201ENST00000566062 339 ntBASIC0.86□□□□□ -2.27
CXCL1P09341 AC002400.1-201ENST00000569310 726 ntBASIC0.86□□□□□ -2.27
CXCL1P09341 MIR4295-201ENST00000585286 85 ntBASIC0.86□□□□□ -2.27
CXCL1P09341 AL583856.2-201ENST00000606298 543 ntBASIC0.86□□□□□ -2.27
CXCL1P09341 AC090970.3-201ENST00000612566 866 ntBASIC0.86□□□□□ -2.27
CXCL1P09341 USP12-203ENST00000620323 349 ntTSL 3 BASIC0.86□□□□□ -2.27
CXCL1P09341 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC0.86□□□□□ -2.27
CXCL1P09341 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC0.86□□□□□ -2.27
CXCL1P09341 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC0.86□□□□□ -2.27
CXCL1P09341 MTND4P21-201ENST00000453886 1357 ntBASIC0.85□□□□□ -2.27
CXCL1P09341 OR5T3-201ENST00000303059 1023 ntBASIC0.85□□□□□ -2.27
CXCL1P09341 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC0.85□□□□□ -2.27
CXCL1P09341 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC0.85□□□□□ -2.27
CXCL1P09341 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC0.85□□□□□ -2.27
CXCL1P09341 CYCSP49-201ENST00000420810 319 ntBASIC0.85□□□□□ -2.27
CXCL1P09341 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC0.85□□□□□ -2.27
CXCL1P09341 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC0.85□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 144.5 ms