Protein–RNA interactions for Protein: P07197

NEFM, Neurofilament medium polypeptide, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEFMP07197 MIR548I1-201ENST00000408810 149 ntBASIC4.84□□□□□ -1.63
NEFMP07197 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC4.84□□□□□ -1.63
NEFMP07197 AC092447.6-201ENST00000414578 210 ntBASIC4.84□□□□□ -1.63
NEFMP07197 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC4.84□□□□□ -1.63
NEFMP07197 SUMO1P3-201ENST00000439961 304 ntBASIC4.84□□□□□ -1.63
NEFMP07197 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC4.84□□□□□ -1.63
NEFMP07197 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC4.84□□□□□ -1.63
NEFMP07197 AC114801.2-201ENST00000503825 781 ntBASIC4.84□□□□□ -1.63
NEFMP07197 AC104619.4-201ENST00000510773 249 ntBASIC4.84□□□□□ -1.63
NEFMP07197 AC092436.3-201ENST00000511788 257 ntBASIC4.84□□□□□ -1.63
NEFMP07197 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC4.84□□□□□ -1.63
NEFMP07197 AC007619.2-201ENST00000605743 379 ntBASIC4.84□□□□□ -1.63
NEFMP07197 AC078938.1-201ENST00000620993 318 ntBASIC4.84□□□□□ -1.63
NEFMP07197 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
NEFMP07197 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC4.84□□□□□ -1.63
NEFMP07197 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
NEFMP07197 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
NEFMP07197 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC4.83□□□□□ -1.64
NEFMP07197 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC4.83□□□□□ -1.64
NEFMP07197 AC091152.2-201ENST00000591628 2569 ntBASIC4.83□□□□□ -1.64
NEFMP07197 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
NEFMP07197 SNORD14.1-201ENST00000365609 90 ntBASIC4.83□□□□□ -1.64
NEFMP07197 MIR517A-201ENST00000385001 87 ntBASIC4.83□□□□□ -1.64
NEFMP07197 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC4.83□□□□□ -1.64
NEFMP07197 RNA5SP56-201ENST00000410277 118 ntBASIC4.83□□□□□ -1.64
NEFMP07197 PGBD4P6-201ENST00000421501 610 ntBASIC4.83□□□□□ -1.64
NEFMP07197 MRPS18CP6-201ENST00000423587 223 ntBASIC4.83□□□□□ -1.64
NEFMP07197 AL160275.3-201ENST00000423876 471 ntBASIC4.83□□□□□ -1.64
NEFMP07197 AC002075.2-201ENST00000425207 252 ntBASIC4.83□□□□□ -1.64
NEFMP07197 RPS24P6-201ENST00000452670 400 ntBASIC4.83□□□□□ -1.64
NEFMP07197 AC109446.1-201ENST00000566172 220 ntBASIC4.83□□□□□ -1.64
NEFMP07197 MIR4429-201ENST00000580105 73 ntBASIC4.83□□□□□ -1.64
NEFMP07197 AC012119.1-201ENST00000603184 222 ntBASIC4.83□□□□□ -1.64
NEFMP07197 MIR92B-201ENST00000607575 96 ntBASIC4.83□□□□□ -1.64
NEFMP07197 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
NEFMP07197 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC4.83□□□□□ -1.64
NEFMP07197 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
NEFMP07197 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC4.83□□□□□ -1.64
NEFMP07197 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
NEFMP07197 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC4.82□□□□□ -1.64
NEFMP07197 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC4.82□□□□□ -1.64
NEFMP07197 Y_RNA.276-201ENST00000364732 109 ntBASIC4.82□□□□□ -1.64
NEFMP07197 Y_RNA.314-201ENST00000365114 102 ntBASIC4.82□□□□□ -1.64
NEFMP07197 MIR449B-201ENST00000384995 97 ntBASIC4.82□□□□□ -1.64
NEFMP07197 PVALB-202ENST00000404171 422 ntTSL 2 BASIC4.82□□□□□ -1.64
NEFMP07197 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC4.82□□□□□ -1.64
NEFMP07197 RNU4-61P-201ENST00000411243 107 ntBASIC4.82□□□□□ -1.64
NEFMP07197 AC092809.3-201ENST00000415453 231 ntBASIC4.82□□□□□ -1.64
NEFMP07197 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC4.82□□□□□ -1.64
NEFMP07197 RPS15AP10-201ENST00000432472 382 ntBASIC4.82□□□□□ -1.64
NEFMP07197 CKS1BP5-201ENST00000434172 273 ntBASIC4.82□□□□□ -1.64
NEFMP07197 HSPD1P21-201ENST00000436541 245 ntBASIC4.82□□□□□ -1.64
NEFMP07197 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC4.82□□□□□ -1.64
NEFMP07197 DYNLT3P2-201ENST00000442517 295 ntBASIC4.82□□□□□ -1.64
NEFMP07197 AC073910.1-201ENST00000445047 438 ntBASIC4.82□□□□□ -1.64
NEFMP07197 AL590399.6-201ENST00000446396 307 ntBASIC4.82□□□□□ -1.64
NEFMP07197 AC011005.2-201ENST00000487324 359 ntBASIC4.82□□□□□ -1.64
NEFMP07197 SNORA40.14-201ENST00000516543 86 ntBASIC4.82□□□□□ -1.64
NEFMP07197 Y_RNA.715-201ENST00000517082 110 ntBASIC4.82□□□□□ -1.64
NEFMP07197 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC4.82□□□□□ -1.64
NEFMP07197 ERHP1-201ENST00000523006 310 ntBASIC4.82□□□□□ -1.64
NEFMP07197 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC4.82□□□□□ -1.64
NEFMP07197 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC4.82□□□□□ -1.64
NEFMP07197 AL365434.2-201ENST00000607979 234 ntBASIC4.82□□□□□ -1.64
NEFMP07197 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC4.82□□□□□ -1.64
NEFMP07197 MIR7851-201ENST00000610611 160 ntBASIC4.82□□□□□ -1.64
NEFMP07197 AC138627.2-201ENST00000624202 601 ntBASIC4.82□□□□□ -1.64
NEFMP07197 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
NEFMP07197 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
NEFMP07197 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
NEFMP07197 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
NEFMP07197 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
NEFMP07197 AC010733.2-201ENST00000589496 5702 ntBASIC4.81□□□□□ -1.64
NEFMP07197 RNU6-209P-201ENST00000384118 107 ntBASIC4.81□□□□□ -1.64
NEFMP07197 MIR670-201ENST00000390142 98 ntBASIC4.81□□□□□ -1.64
NEFMP07197 RNU2-64P-201ENST00000411315 191 ntBASIC4.81□□□□□ -1.64
NEFMP07197 RPS29P4-201ENST00000414733 161 ntBASIC4.81□□□□□ -1.64
NEFMP07197 ARL5AP4-201ENST00000430731 512 ntBASIC4.81□□□□□ -1.64
NEFMP07197 AL121871.1-201ENST00000443413 436 ntBASIC4.81□□□□□ -1.64
NEFMP07197 RNU7-187P-201ENST00000458985 68 ntBASIC4.81□□□□□ -1.64
NEFMP07197 AC106707.2-201ENST00000484182 374 ntBASIC4.81□□□□□ -1.64
NEFMP07197 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC4.81□□□□□ -1.64
NEFMP07197 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC4.81□□□□□ -1.64
NEFMP07197 IGKV2D-19-201ENST00000523346 262 ntBASIC4.81□□□□□ -1.64
NEFMP07197 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC4.81□□□□□ -1.64
NEFMP07197 AC023157.2-201ENST00000540596 141 ntBASIC4.81□□□□□ -1.64
NEFMP07197 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC4.81□□□□□ -1.64
NEFMP07197 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC4.81□□□□□ -1.64
NEFMP07197 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC4.81□□□□□ -1.64
NEFMP07197 ELOCP5-201ENST00000604924 333 ntBASIC4.81□□□□□ -1.64
NEFMP07197 AC002044.1-201ENST00000606707 158 ntBASIC4.81□□□□□ -1.64
NEFMP07197 AC015967.1-201ENST00000619893 476 ntBASIC4.81□□□□□ -1.64
NEFMP07197 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC4.81□□□□□ -1.64
NEFMP07197 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
NEFMP07197 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC4.81□□□□□ -1.64
NEFMP07197 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
NEFMP07197 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
NEFMP07197 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
NEFMP07197 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
NEFMP07197 RNU6-596P-201ENST00000365395 98 ntBASIC4.8□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 291.5 ms