Protein–RNA interactions for Protein: P01906

HLA-DQA2, HLA class II histocompatibility antigen, DQ alpha 2 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA2P01906 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC3□□□□□ -1.93
HLA-DQA2P01906 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3□□□□□ -1.93
HLA-DQA2P01906 AC110491.1-201ENST00000562191 2010 ntBASIC3□□□□□ -1.93
HLA-DQA2P01906 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3□□□□□ -1.93
HLA-DQA2P01906 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3□□□□□ -1.93
HLA-DQA2P01906 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3□□□□□ -1.93
HLA-DQA2P01906 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
HLA-DQA2P01906 ZBTB8OSP1-201ENST00000342688 498 ntBASIC2.99□□□□□ -1.93
HLA-DQA2P01906 Y_RNA.67-201ENST00000362870 100 ntBASIC2.99□□□□□ -1.93
HLA-DQA2P01906 Y_RNA.135-201ENST00000363439 95 ntBASIC2.99□□□□□ -1.93
HLA-DQA2P01906 RNU6-1280P-201ENST00000365211 107 ntBASIC2.99□□□□□ -1.93
HLA-DQA2P01906 Y_RNA.339-201ENST00000365325 102 ntBASIC2.99□□□□□ -1.93
HLA-DQA2P01906 RNU6-827P-201ENST00000365553 106 ntBASIC2.99□□□□□ -1.93
HLA-DQA2P01906 RNU6-1329P-201ENST00000365664 107 ntBASIC2.99□□□□□ -1.93
HLA-DQA2P01906 SNORA5A-201ENST00000384111 134 ntBASIC2.99□□□□□ -1.93
HLA-DQA2P01906 RNU6-95P-201ENST00000384697 107 ntBASIC2.99□□□□□ -1.93
HLA-DQA2P01906 MIR218-2-201ENST00000385006 110 ntBASIC2.99□□□□□ -1.93
HLA-DQA2P01906 MT-TD-201ENST00000387419 68 ntBASIC2.99□□□□□ -1.93
HLA-DQA2P01906 EI24P2-201ENST00000397776 1076 ntBASIC2.99□□□□□ -1.93
HLA-DQA2P01906 MIR548K-201ENST00000408406 116 ntBASIC2.99□□□□□ -1.93
HLA-DQA2P01906 U3.37-201ENST00000408528 213 ntBASIC2.99□□□□□ -1.93
HLA-DQA2P01906 RNA5SP44-201ENST00000410446 133 ntBASIC2.99□□□□□ -1.93
HLA-DQA2P01906 AC017079.2-201ENST00000416102 485 ntBASIC2.99□□□□□ -1.93
HLA-DQA2P01906 AC245291.1-201ENST00000419501 328 ntBASIC2.99□□□□□ -1.93
HLA-DQA2P01906 RPS3AP52-201ENST00000435639 297 ntBASIC2.99□□□□□ -1.93
HLA-DQA2P01906 HMGN2P20-201ENST00000437531 273 ntBASIC2.99□□□□□ -1.93
HLA-DQA2P01906 HMGN2P10-201ENST00000448085 265 ntBASIC2.99□□□□□ -1.93
HLA-DQA2P01906 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC2.99□□□□□ -1.93
HLA-DQA2P01906 AC130509.1-201ENST00000464158 433 ntBASIC2.99□□□□□ -1.93
HLA-DQA2P01906 MTND5P5-201ENST00000503764 376 ntBASIC2.99□□□□□ -1.93
HLA-DQA2P01906 RPL39P5-202ENST00000512505 151 ntBASIC2.99□□□□□ -1.93
HLA-DQA2P01906 Y_RNA.691-201ENST00000516611 103 ntBASIC2.99□□□□□ -1.93
HLA-DQA2P01906 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC2.99□□□□□ -1.93
HLA-DQA2P01906 AC103996.1-201ENST00000555468 102 ntBASIC2.99□□□□□ -1.93
HLA-DQA2P01906 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC2.99□□□□□ -1.93
HLA-DQA2P01906 AC007151.1-201ENST00000572774 483 ntBASIC2.99□□□□□ -1.93
HLA-DQA2P01906 MIR3186-201ENST00000577404 85 ntBASIC2.99□□□□□ -1.93
HLA-DQA2P01906 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC2.99□□□□□ -1.93
HLA-DQA2P01906 XIST_intron.1-201ENST00000619444 68 ntBASIC2.99□□□□□ -1.93
HLA-DQA2P01906 AC092628.2-201ENST00000622492 339 ntBASIC2.99□□□□□ -1.93
HLA-DQA2P01906 AL359757.2-201ENST00000624309 274 ntBASIC2.99□□□□□ -1.93
HLA-DQA2P01906 MIR3199-2-201ENST00000636243 86 ntBASIC2.99□□□□□ -1.93
HLA-DQA2P01906 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC2.99□□□□□ -1.93
HLA-DQA2P01906 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
HLA-DQA2P01906 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
HLA-DQA2P01906 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC2.98□□□□□ -1.93
HLA-DQA2P01906 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC2.98□□□□□ -1.93
HLA-DQA2P01906 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
HLA-DQA2P01906 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
HLA-DQA2P01906 RNU6-428P-201ENST00000362942 107 ntBASIC2.98□□□□□ -1.93
HLA-DQA2P01906 Y_RNA.474-201ENST00000384341 102 ntBASIC2.98□□□□□ -1.93
HLA-DQA2P01906 MIR554-201ENST00000384874 96 ntBASIC2.98□□□□□ -1.93
HLA-DQA2P01906 RNU1-101P-201ENST00000391171 127 ntBASIC2.98□□□□□ -1.93
HLA-DQA2P01906 RAB9AP3-201ENST00000412737 573 ntBASIC2.98□□□□□ -1.93
HLA-DQA2P01906 AC074085.1-201ENST00000413598 418 ntBASIC2.98□□□□□ -1.93
HLA-DQA2P01906 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC2.98□□□□□ -1.93
HLA-DQA2P01906 CYCSP4-201ENST00000429682 331 ntBASIC2.98□□□□□ -1.93
HLA-DQA2P01906 RPS15AP5-201ENST00000436276 388 ntBASIC2.98□□□□□ -1.93
HLA-DQA2P01906 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC2.98□□□□□ -1.93
HLA-DQA2P01906 CST9LP2-201ENST00000437612 320 ntBASIC2.98□□□□□ -1.93
HLA-DQA2P01906 HIGD1AP2-201ENST00000446367 280 ntBASIC2.98□□□□□ -1.93
HLA-DQA2P01906 AC125238.1-201ENST00000448842 249 ntBASIC2.98□□□□□ -1.93
HLA-DQA2P01906 RAB9AP1-201ENST00000449393 573 ntBASIC2.98□□□□□ -1.93
HLA-DQA2P01906 RNU7-187P-201ENST00000458985 68 ntBASIC2.98□□□□□ -1.93
HLA-DQA2P01906 RN7SL442P-201ENST00000473804 320 ntBASIC2.98□□□□□ -1.93
HLA-DQA2P01906 AL049830.2-201ENST00000480072 201 ntBASIC2.98□□□□□ -1.93
HLA-DQA2P01906 FGF7P4-201ENST00000509595 295 ntBASIC2.98□□□□□ -1.93
HLA-DQA2P01906 AC096745.1-201ENST00000509945 370 ntBASIC2.98□□□□□ -1.93
HLA-DQA2P01906 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC2.98□□□□□ -1.93
HLA-DQA2P01906 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC2.98□□□□□ -1.93
HLA-DQA2P01906 SNORA64.4-201ENST00000516632 81 ntBASIC2.98□□□□□ -1.93
HLA-DQA2P01906 RNU1-45P-201ENST00000517191 141 ntBASIC2.98□□□□□ -1.93
HLA-DQA2P01906 IGKV3OR22-2-201ENST00000517943 313 ntBASIC2.98□□□□□ -1.93
HLA-DQA2P01906 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC2.98□□□□□ -1.93
HLA-DQA2P01906 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
HLA-DQA2P01906 HPRT1P3-201ENST00000539521 576 ntBASIC2.98□□□□□ -1.93
HLA-DQA2P01906 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC2.98□□□□□ -1.93
HLA-DQA2P01906 AL163153.1-201ENST00000554223 283 ntBASIC2.98□□□□□ -1.93
HLA-DQA2P01906 UBE2Q2P8-201ENST00000560644 102 ntBASIC2.98□□□□□ -1.93
HLA-DQA2P01906 POLR3GP2-201ENST00000588366 668 ntBASIC2.98□□□□□ -1.93
HLA-DQA2P01906 AC016727.1-205ENST00000605437 569 ntBASIC2.98□□□□□ -1.93
HLA-DQA2P01906 MIR6128-201ENST00000615528 109 ntBASIC2.98□□□□□ -1.93
HLA-DQA2P01906 MIR8058-201ENST00000615737 89 ntBASIC2.98□□□□□ -1.93
HLA-DQA2P01906 MIR6134-201ENST00000617606 109 ntBASIC2.98□□□□□ -1.93
HLA-DQA2P01906 HOTTIP_4.1-201ENST00000618195 165 ntBASIC2.98□□□□□ -1.93
HLA-DQA2P01906 AC090617.7-201ENST00000623952 126 ntBASIC2.98□□□□□ -1.93
HLA-DQA2P01906 AL034408.1-202ENST00000636088 415 ntBASIC2.98□□□□□ -1.93
HLA-DQA2P01906 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC2.98□□□□□ -1.93
HLA-DQA2P01906 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC2.98□□□□□ -1.93
HLA-DQA2P01906 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.98□□□□□ -1.93
HLA-DQA2P01906 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC2.98□□□□□ -1.93
HLA-DQA2P01906 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC2.98□□□□□ -1.93
HLA-DQA2P01906 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
HLA-DQA2P01906 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC2.97□□□□□ -1.93
HLA-DQA2P01906 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC2.97□□□□□ -1.93
HLA-DQA2P01906 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC2.97□□□□□ -1.93
HLA-DQA2P01906 PTER-201ENST00000298942 3448 ntTSL 5 BASIC2.97□□□□□ -1.93
HLA-DQA2P01906 RNU6-858P-201ENST00000362436 107 ntBASIC2.97□□□□□ -1.93
HLA-DQA2P01906 RNU4-35P-201ENST00000362588 141 ntBASIC2.97□□□□□ -1.93
HLA-DQA2P01906 SNORA14A-201ENST00000364773 135 ntBASIC2.97□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 190.8 ms